Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 1.8e-57 226.9 262 100.0
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 2.3e-55 219.9 262 97.3
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 7.3e-46 188.3 260 91.2
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 2.0e-43 180.3 262 89.3
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 2.9e-42 176.4 260 82.3
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 4.9e-42 175.6 260 89.2
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 6.4e-42 175.3 260 87.3
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 6.4e-42 175.3 260 88.5
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 8.3e-42 174.9 260 88.8
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 8.3e-42 174.9 260 88.8
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 1.1e-41 174.5 260 82.7
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 1.1e-41 174.5 260 78.8
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 1.1e-41 174.5 260 86.2
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 1.1e-41 174.5 260 88.8
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 1.4e-41 174.1 260 86.9
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 1.4e-41 174.1 260 88.8
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 3.2e-41 172.9 260 89.2
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 3.2e-41 172.9 260 87.3
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 4.1e-41 172.6 260 80.0
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 5.4e-41 172.2 260 85.8
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 5.4e-41 172.2 260 80.0
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 5.4e-41 172.2 260 86.9
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 5.4e-41 172.2 260 82.3
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 7.0e-41 171.8 260 87.3
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 7.0e-41 171.8 260 87.3
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 1.2e-40 171.0 260 87.3
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 1.2e-40 171.0 260 88.1
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 1.6e-40 170.6 260 88.1
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 2.0e-40 170.2 260 80.8
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 2.0e-40 170.2 260 79.6
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 2.7e-40 169.9 260 87.3
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 3.5e-40 169.5 260 87.7
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.5e-40 169.5 260 87.3
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.5e-40 169.5 260 87.3
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 3.5e-40 169.5 260 87.3
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 4.6e-40 169.1 261 87.4
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 4.6e-40 169.1 260 86.5
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 4.6e-40 169.1 260 86.9
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 6.0e-40 168.7 260 85.4
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 7.8e-40 168.3 260 86.5
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 1.3e-39 167.5 260 86.5
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 1.7e-39 167.2 260 86.5
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 5.0e-39 165.6 260 86.5
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 1.1e-38 164.5 260 86.5
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 1.5e-38 164.1 260 86.5
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 1.9e-38 163.7 260 86.2
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 3.3e-38 162.9 262 85.1
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 7.3e-38 161.8 261 85.4
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 7.3e-38 161.8 263 85.9
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 7.3e-38 161.8 260 85.8
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 9.5e-38 161.4 260 85.4
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 9.5e-38 161.4 260 39.6
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 9.5e-38 161.4 260 85.8
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 1.6e-37 160.6 260 85.4
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 1.6e-37 160.6 264 84.1
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 1.6e-37 160.6 264 84.1
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 1.6e-37 160.6 264 84.1
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 1.6e-37 160.6 260 86.2
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 2.1e-37 160.2 263 85.6
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 2.1e-37 160.2 263 85.6
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 2.8e-37 159.8 260 85.0
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 3.6e-37 159.5 260 86.2
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.6e-37 159.5 260 84.6
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 3.6e-37 159.5 260 83.8
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 4.7e-37 159.1 264 83.7
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 6.2e-37 158.7 260 85.4
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 6.2e-37 158.7 260 83.8
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 8.0e-37 158.3 260 85.0
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 8.0e-37 158.3 263 84.8
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 8.0e-37 158.3 263 84.8
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 1.1e-36 157.9 260 85.4
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 1.4e-36 157.5 260 83.5
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 1.4e-36 157.5 260 80.4
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 1.8e-36 157.1 260 84.6
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 3.1e-36 156.4 260 85.0
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 3.1e-36 156.4 260 85.4
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 3.1e-36 156.4 260 85.0
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 3.4e-35 152.9 260 84.2
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 3.4e-35 152.9 260 83.8
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 1.3e-34 151.0 260 84.2
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 2.4e-33 146.7 260 83.5
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 3.2e-33 146.4 283 65.7
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 5.4e-33 145.6 251 83.7
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 1.6e-32 144.1 260 81.9
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 1.3e-31 141.0 267 61.8
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 3.0e-31 139.8 260 76.5
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 1.5e-30 137.5 260 82.7
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 1.5e-30 137.5 260 82.3
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 5.6e-30 135.6 260 82.3
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.6e-29 134.0 263 79.1
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 1.4e-28 131.0 260 58.1
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 1.2e-27 127.9 267 79.8
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.0e-27 127.1 251 82.9
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.0e-27 127.1 253 84.2
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 2.2e-26 123.6 298 46.3
AUR62008501 Chenopodium quinoa HOM05D006238 ORTHO05D007458 3.2e-25 119.8 76 73.7
Cc04_g15060 Coffea canephora HOM05D006238 ORTHO05D007458 7.1e-25 118.6 232 86.2
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 9.2e-25 118.2 285 73.0
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 2.7e-24 116.7 268 73.5
Oeu062485.1 Olea europaea HOM05D006238 ORTHO05D007458 4.6e-24 115.9 76 69.7
Gorai.008G197100 Gossypium raimondii HOM05D006238 ORTHO05D007458 6.0e-24 115.5 234 84.6
DCAR_016594 Daucus carota HOM05D006238 ORTHO05D007458 1.3e-23 114.4 229 86.0
Dinv38791 Davidia involucrata HOM05D006238 ORTHO05D007458 5.1e-23 112.5 61 86.9
AUR62021591 Chenopodium quinoa HOM05D006238 ORTHO05D007458 8.6e-23 111.7 86 65.1
Sc10g0009770 Simmondsia chinensis HOM05D006238 ORTHO05D007458 1.1e-22 111.3 73 69.9
Cpa.g.sc94.13 Carica papaya HOM05D006238 ORTHO05D007458 1.5e-22 110.9 75 70.7
Phvul.009G193701 Phaseolus vulgaris HOM05D006238 ORTHO05D007458 7.3e-22 108.6 62 83.9
Cpa.g.sc94.12 Carica papaya HOM05D006238 ORTHO05D007458 1.2e-21 107.8 61 82.0
Sabra15G0078500 Salix brachista HOM05D006238 ORTHO05D007458 2.8e-21 106.7 97 58.8
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 3.6e-21 106.3 335 62.7
Manes.06G087000 Manihot esculenta HOM05D006238 ORTHO05D007458 8.1e-21 105.1 61 78.7
Nitab4.5_0005160g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 1.8e-20 104.0 62 77.4
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 1.8e-20 104.0 62 79.0
Os03g0212200 Oryza sativa ssp. japonica HOM05D006238 ORTHO05D007458 1.2e-19 101.3 75 64.0
PGSC0003DMG400005395 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.5e-19 100.9 62 74.2
SMO364G0258 Selaginella moellendorffii HOM05D006238 ORTHO05D007458 2.0e-19 100.5 260 70.4
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 1.7e-18 97.4 261 73.2
HPP92_027112 Vanilla planifolia HOM05D006238 ORTHO05D007458 1.1e-17 94.7 61 72.1
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 1.9e-17 94.0 133 43.6
CDE10G0764 Ceratophyllum demersum HOM05D000773 ORTHO05D000588 1.6e-16 90.9 76 55.3
Dinv10691 Davidia involucrata HOM05D000773 ORTHO05D000588 4.6e-16 89.4 206 90.3
Hund26925 Selenicereus undatus HOM05D006238 ORTHO05D007458 4.6e-16 89.4 64 67.2
Hund26924 Selenicereus undatus HOM05D006238 ORTHO05D007458 5.1e-15 85.9 56 73.2
AagrBONN_evm.TU.Sc2ySwM_228.2402 Anthoceros agrestis HOM05D006238 ORTHO05D007458 6.6e-15 85.5 60 61.7
Lj5A105G57 Lonicera japonica HOM05D006238 ORTHO05D007458 4.3e-14 82.8 52 73.1
Peaxi162Scf00201g00133 Petunia axillaris HOM05D006238 ORTHO05D007458 6.2e-13 79.0 73 54.8
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 2.6e-11 73.6 153 35.9
CBR_g18689 Chara braunii HOM05D006238 ORTHO05D007458 6.4e-10 68.9 59 49.2
Ah.11g047980 Amaranthus hybridus HOM05D006238 ORTHO05D007458 2.7e-08 63.5 70 45.7
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 4.6e-08 62.8 61 42.6
Cre12.g503600 Chlamydomonas reinhardtii HOM05D006238 ORTHO05D007458 1.7e-07 60.8 61 45.9
Hund05040 Selenicereus undatus HOM05D006395 ORTHO05D007894 3.0e-07 60.1 61 45.9
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 3.9e-07 59.7 62 41.9
SGA_v2.0_scaffold20G09294 Striga asiatica HOM05D006395 ORTHO05D007894 3.9e-07 59.7 72 40.3
ClCG02G019360 Citrullus lanatus HOM05D006395 ORTHO05D007894 5.1e-07 59.3 61 42.6
CsaV3_6G015980 Cucumis sativus L. HOM05D006395 ORTHO05D007894 5.1e-07 59.3 61 42.6
Gohir.A03G027300 Gossypium hirsutum HOM05D006395 ORTHO05D007894 5.1e-07 59.3 60 46.7
Gohir.D03G141400 Gossypium hirsutum HOM05D006395 ORTHO05D007894 5.1e-07 59.3 60 46.7
Gorai.003G148100 Gossypium raimondii HOM05D006395 ORTHO05D007894 5.1e-07 59.3 60 46.7
PGR102G2618 Punica granatum HOM05D006395 ORTHO05D007894 6.6e-07 58.9 61 44.3
AagrBONN_evm.TU.Sc2ySwM_228.749 Anthoceros agrestis HOM05D006395 ORTHO05D007894 8.7e-07 58.5 61 41.0
MELO3C026838.2 Cucumis melo HOM05D006395 ORTHO05D007894 8.7e-07 58.5 61 42.6
MCO07G688 Micromonas commoda HOM05D006238 ORTHO05D007458 8.7e-07 58.5 84 38.1
Sc06g0008170 Simmondsia chinensis HOM05D006395 ORTHO05D007894 1.9e-06 57.4 61 42.6
Nitab4.5_0000967g0070 Nicotiana tabacum HOM05D006395 ORTHO05D007894 2.5e-06 57.0 61 42.6
Nitab4.5_0001941g0070 Nicotiana tabacum HOM05D006395 ORTHO05D007894 2.5e-06 57.0 61 42.6
CDE10G0380 Ceratophyllum demersum HOM05D000773 ORTHO05D000588 4.3e-06 56.2 56 51.8
Solyc06g007250.4 Solanum lycopersicum HOM05D006395 ORTHO05D007894 4.3e-06 56.2 61 41.0
Sopen06g002210 Solanum pennellii HOM05D006395 ORTHO05D007894 4.3e-06 56.2 61 41.0
PGSC0003DMG400020546 Solanum tuberosum HOM05D006395 ORTHO05D007894 4.3e-06 56.2 61 41.0
Cfa011744 Carpinus fangiana HOM05D006395 ORTHO05D007894 5.6e-06 55.8 61 41.0
Dinv28676 Davidia involucrata HOM05D006395 ORTHO05D007894 5.6e-06 55.8 68 38.2
ATR0174G031 Amborella trichopoda HOM05D006395 ORTHO05D007894 7.3e-06 55.5 67 37.3
Zm00001eb046860 Zea mays HOM05D006395 ORTHO05D007894 7.3e-06 55.5 63 42.9
Haze_24385 Corylus avellana HOM05D006395 ORTHO05D007894 9.6e-06 55.1 61 41.0
Lj2C1089G4 Lonicera japonica HOM05D006395 ORTHO05D007894 9.6e-06 55.1 61 44.3
Lj9A530T24 Lonicera japonica HOM05D006395 ORTHO05D007894 9.6e-06 55.1 61 44.3


User provided reference genes

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