Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 2.2e-45 185.3 95 100.0
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 8.5e-45 183.3 94 97.9
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 2.0e-30 135.6 100 69.0
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 4.5e-30 134.4 92 72.8
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.7e-29 132.5 92 72.8
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 2.2e-29 132.1 90 64.4
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 3.8e-29 131.3 92 67.4
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 6.5e-29 130.6 91 71.4
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 6.5e-29 130.6 90 67.8
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 6.5e-29 130.6 91 72.5
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 8.5e-29 130.2 90 67.8
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 8.5e-29 130.2 92 70.7
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 8.5e-29 130.2 90 68.9
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 1.1e-28 129.8 90 64.4
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.1e-28 129.8 90 65.6
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.1e-28 129.8 95 69.5
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.5e-28 129.4 92 70.7
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.5e-28 129.4 90 65.6
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.5e-28 129.4 90 65.6
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.5e-28 129.4 95 69.5
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.5e-28 128.6 92 71.7
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.5e-28 128.6 92 71.7
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.5e-28 128.6 90 68.9
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.5e-28 128.6 90 68.9
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 3.2e-28 128.3 94 68.1
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.2e-28 128.3 90 67.8
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 3.2e-28 128.3 95 70.5
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 4.2e-28 127.9 92 66.3
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 5.5e-28 127.5 92 69.6
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 7.2e-28 127.1 90 66.7
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 7.2e-28 127.1 92 69.6
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 7.2e-28 127.1 90 66.7
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.2e-28 127.1 90 67.8
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 9.4e-28 126.7 90 66.7
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.6e-27 125.9 92 68.5
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.6e-27 125.9 92 68.5
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.6e-27 125.9 90 66.7
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.6e-27 125.9 90 67.8
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 2.1e-27 125.6 90 66.7
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 2.1e-27 125.6 90 66.7
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 2.1e-27 125.6 90 66.7
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 2.1e-27 125.6 90 68.9
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.7e-27 125.2 89 68.5
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 2.7e-27 125.2 90 66.7
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 2.7e-27 125.2 95 66.3
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.7e-27 125.2 90 66.7
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 2.7e-27 125.2 90 67.8
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 3.6e-27 124.8 89 68.5
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 3.6e-27 124.8 91 64.8
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 3.6e-27 124.8 93 66.7
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 3.6e-27 124.8 93 66.7
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 3.6e-27 124.8 92 68.5
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.7e-27 124.4 90 63.3
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 4.7e-27 124.4 93 65.6
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 4.7e-27 124.4 93 65.6
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 4.7e-27 124.4 93 65.6
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 4.7e-27 124.4 95 60.0
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 6.1e-27 124.0 87 67.8
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 6.1e-27 124.0 93 66.7
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.1e-27 124.0 90 66.7
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 6.1e-27 124.0 89 67.4
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 8.0e-27 123.6 91 67.0
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 8.0e-27 123.6 90 65.6
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.0e-26 123.2 90 67.8
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.0e-26 123.2 87 66.7
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.0e-26 123.2 91 65.9
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.0e-26 123.2 90 65.6
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.4e-26 122.9 90 65.6
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.4e-26 122.9 92 63.0
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.8e-26 122.5 92 64.1
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.8e-26 122.5 90 64.4
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.3e-26 122.1 90 66.7
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.3e-26 122.1 92 66.3
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 3.0e-26 121.7 91 67.0
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.0e-26 121.7 90 65.6
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 3.0e-26 121.7 90 65.6
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 4.0e-26 121.3 91 63.7
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 4.0e-26 121.3 88 65.9
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 5.2e-26 120.9 90 63.3
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 6.7e-26 120.6 90 64.4
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 6.7e-26 120.6 91 65.9
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 6.7e-26 120.6 92 63.0
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 6.7e-26 120.6 90 62.2
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 6.7e-26 120.6 78 71.8
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 8.8e-26 120.2 90 65.6
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 8.8e-26 120.2 94 62.8
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.2e-25 119.8 89 64.0
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.2e-25 119.8 91 64.8
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 1.2e-25 119.8 90 65.6
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 1.2e-25 119.8 91 67.0
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 1.2e-25 119.8 92 62.0
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 1.5e-25 119.4 83 68.7
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 1.5e-25 119.4 92 59.8
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.5e-25 119.4 92 65.2
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.5e-25 119.4 95 65.3
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.5e-25 119.4 91 67.0
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 2.0e-25 119.0 92 62.0
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 2.0e-25 119.0 92 65.2
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 2.0e-25 119.0 92 65.2
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 2.0e-25 119.0 88 63.6
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.6e-25 118.6 90 64.4
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 2.6e-25 118.6 92 62.0
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 3.3e-25 118.2 91 65.9
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 4.4e-25 117.9 95 61.1
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 4.4e-25 117.9 92 63.0
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.4e-25 117.9 93 63.4
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 4.4e-25 117.9 95 58.9
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 5.7e-25 117.5 90 63.3
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 5.7e-25 117.5 95 63.2
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 9.7e-25 116.7 91 65.9
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 1.3e-24 116.3 90 64.4
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 1.3e-24 116.3 90 64.4
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 1.3e-24 116.3 90 64.4
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.3e-24 116.3 95 62.1
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 1.3e-24 116.3 94 64.9
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 1.7e-24 115.9 92 58.7
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 1.7e-24 115.9 90 64.4
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 1.7e-24 115.9 90 64.4
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 1.7e-24 115.9 83 65.1
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.7e-24 115.9 94 63.8
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 2.2e-24 115.5 90 61.1
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 2.2e-24 115.5 92 60.9
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 2.8e-24 115.2 95 58.9
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.8e-24 115.2 88 63.6
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.8e-24 115.2 87 65.5
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 2.8e-24 115.2 78 67.9
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 3.7e-24 114.8 98 64.3
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 3.7e-24 114.8 87 60.9
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 3.7e-24 114.8 78 69.2
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 6.3e-24 114.0 76 69.7
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 1.1e-23 113.2 95 60.0
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 1.1e-23 113.2 95 58.9
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 1.1e-23 113.2 95 58.9
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 1.4e-23 112.8 91 63.7
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 1.4e-23 112.8 89 62.9
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.4e-23 112.8 91 61.5
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 1.4e-23 112.8 95 58.9
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 2.4e-23 112.1 88 62.5
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 4.1e-23 111.3 87 58.6
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 9.1e-23 110.2 91 61.5
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.6e-22 109.4 90 57.8
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 2.7e-22 108.6 91 59.3
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.5e-22 108.2 87 60.9
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 4.5e-22 107.8 101 59.4
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 7.7e-22 107.1 81 61.7
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.2e-21 105.5 78 64.1
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 6.5e-21 104.0 95 60.0
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 8.5e-21 103.6 80 67.5
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.5e-21 103.6 96 55.2
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 1.1e-20 103.2 92 54.3
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.5e-20 102.8 81 59.3
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 1.9e-20 102.4 84 63.1
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 9.4e-20 100.1 91 54.9
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 1.6e-19 99.4 90 54.4
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 1.6e-19 99.4 80 62.5
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 2.7e-19 98.6 82 58.5
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 6.8e-18 94.0 82 56.1
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 6.8e-18 94.0 65 67.7
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.2e-17 93.2 76 56.6
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 1.8e-15 85.9 79 54.4
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 5.9e-14 80.9 72 55.6
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.3e-13 79.7 61 59.0
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 1.7e-13 79.3 67 52.2
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 6.5e-13 77.4 71 46.5
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 2.5e-12 75.5 71 49.3
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.2e-12 75.1 73 43.8
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 7.2e-12 73.9 52 71.2
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 7.2e-12 73.9 52 71.2
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 6.8e-10 67.4 66 50.0
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 5.7e-09 64.3 38 71.1
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.6e-06 56.2 66 36.4
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.6e-06 56.2 60 43.3


User provided reference genes

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