Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0405 Papaver somniferum HOM05D003539 ORTHO05D004111 0.0e+00 1221.1 615 100.0
PSO170G6051 Papaver somniferum HOM05D003539 ORTHO05D004111 0.0e+00 1134.8 613 93.6
TAR381G1444 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.7e-186 656.8 635 56.4
Nn5g28137 Nelumbo nucifera HOM05D003539 ORTHO05D004111 2.3e-183 646.4 646 56.0
Dinv40214 Davidia involucrata HOM05D003539 ORTHO05D004111 3.1e-172 609.4 635 51.7
GSVIVG01026448001 Vitis vinifera HOM05D003539 ORTHO05D004111 3.4e-171 605.9 621 52.2
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla HOM05D003539 ORTHO05D004111 3.2e-169 599.4 639 50.7
Dinv28297 Davidia involucrata HOM05D003539 ORTHO05D004111 2.7e-168 596.3 637 51.3
CSS0035723 Camellia sinensis var. sinensis HOM05D003539 ORTHO05D004111 3.0e-167 592.8 643 51.5
Manes.01G157300 Manihot esculenta HOM05D003539 ORTHO05D004111 2.4e-164 583.2 647 50.7
Atru.chr3.55 Acer truncatum HOM05D003539 ORTHO05D004111 2.0e-163 580.1 640 50.9
Sc06g0005250 Simmondsia chinensis HOM05D003539 ORTHO05D004111 5.9e-163 578.6 644 49.1
vmacro18474 Vaccinium macrocarpon HOM05D003539 ORTHO05D004111 2.2e-162 576.6 653 50.1
CANSAT35G0647 Cannabis sativa HOM05D003539 ORTHO05D004111 3.2e-161 572.8 625 51.0
Gohir.D03G066500 Gossypium hirsutum HOM05D003539 ORTHO05D004111 4.2e-161 572.4 644 50.5
Eucgr.J02557 Eucalyptus grandis HOM05D003539 ORTHO05D004111 1.6e-160 570.5 642 49.1
Gorai.003G064600 Gossypium raimondii HOM05D003539 ORTHO05D004111 1.6e-160 570.5 644 50.3
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.6e-160 570.5 564 55.9
QL06p053198 Quercus lobata HOM05D003539 ORTHO05D004111 6.1e-160 568.5 618 51.5
Glyma.09G196200 Glycine max HOM05D003539 ORTHO05D004111 1.0e-159 567.8 646 50.5
TWI79G1391 Tripterygium wilfordii HOM05D003539 ORTHO05D004111 1.4e-159 567.4 640 48.4
Glyma.16G112800 Glycine max HOM05D003539 ORTHO05D004111 8.8e-159 564.7 639 49.8
MBI04_g31205_MAGBIO Magnolia biondii HOM05D003539 ORTHO05D004111 1.9e-158 563.5 618 51.6
CiPaw.15G173100 Carya illinoinensis HOM05D003539 ORTHO05D004111 2.8e-157 559.7 599 51.9
Thecc.01G002200 Theobroma cacao HOM05D003539 ORTHO05D004111 2.4e-156 556.6 643 49.6
MD02G1108900 Malus domestica HOM05D003539 ORTHO05D004111 1.2e-155 554.3 640 48.9
PGR044G1248 Punica granatum HOM05D003539 ORTHO05D004111 1.2e-155 554.3 642 47.7
Cfa007110 Carpinus fangiana HOM05D003539 ORTHO05D004111 1.5e-155 553.9 623 50.4
Phvul.010G020100 Phaseolus vulgaris HOM05D003539 ORTHO05D004111 3.4e-155 552.7 622 49.5
Prupe.7G186400 Prunus persica HOM05D003539 ORTHO05D004111 4.5e-155 552.4 633 48.2
Haze_03640 Corylus avellana HOM05D003539 ORTHO05D004111 7.7e-155 551.6 623 49.9
Oeu010807.1 Olea europaea HOM05D003539 ORTHO05D004111 3.8e-154 549.3 634 47.8
Sed0003470 Sechium edule HOM05D003539 ORTHO05D004111 5.0e-154 548.9 632 47.8
Aqoxy6G01535 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 1.4e-153 547.4 656 48.6
Cc07_g12170 Coffea canephora HOM05D003539 ORTHO05D004111 1.4e-153 547.4 650 48.5
ClCG02G000270 Citrullus lanatus HOM05D003539 ORTHO05D004111 2.5e-153 546.6 662 46.7
Oeu063413.2 Olea europaea HOM05D003539 ORTHO05D004111 1.6e-152 543.9 634 48.3
VMungo1309G1473 Vigna mungo HOM05D003539 ORTHO05D004111 2.3e-151 540.0 623 49.9
Lalb_Chr09g0334501 Lupinus albus HOM05D003539 ORTHO05D004111 3.9e-151 539.3 636 48.1
Rhsim08G0026200 Rhododendron simsii HOM05D003539 ORTHO05D004111 2.0e-150 537.0 660 48.5
THA.LOC104814350 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 2.2e-149 533.5 631 47.7
Aqoxy3G00418 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 4.8e-149 532.3 658 48.3
Manes.11G091200 Manihot esculenta HOM05D003539 ORTHO05D004111 4.8e-149 532.3 649 47.8
Lsat_1_v5_gn_5_30740 Lactuca sativa HOM05D003539 ORTHO05D004111 8.2e-149 531.6 627 47.5
Lalb_Chr05g0229501 Lupinus albus HOM05D003539 ORTHO05D004111 1.1e-148 531.2 634 47.6
arahy.Tifrunner.gnm1.ann1.4LH58N Arachis hypogaea HOM05D003539 ORTHO05D004111 2.4e-148 530.0 718 43.5
HanXRQChr16g0510861 Helianthus annuus HOM05D003539 ORTHO05D004111 3.1e-148 529.6 606 49.0
Potri.005G098500 Populus trichocarpa HOM05D003539 ORTHO05D004111 9.1e-148 528.1 649 46.8
arahy.Tifrunner.gnm1.ann1.PPI4NM Arachis hypogaea HOM05D003539 ORTHO05D004111 1.2e-147 527.7 696 44.5
Lj4g0013403 Lotus japonicus HOM05D003539 ORTHO05D004111 5.9e-147 525.4 638 48.3
Sed0013779 Sechium edule HOM05D003539 ORTHO05D004111 7.7e-147 525.0 539 51.2
AL4G30740 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.0e-146 524.6 615 48.1
MSTRG.20424 Avicennia marina HOM05D003539 ORTHO05D004111 2.9e-146 523.1 630 45.6
Lj2C504G7 Lonicera japonica HOM05D003539 ORTHO05D004111 5.0e-146 522.3 538 51.1
Sabra05G0080900 Salix brachista HOM05D003539 ORTHO05D004111 2.5e-145 520.0 605 48.1
Hund21770 Selenicereus undatus HOM05D003539 ORTHO05D004111 9.4e-145 518.1 648 46.0
EL10Ac4g09711 Beta vulgaris HOM05D003539 ORTHO05D004111 1.2e-144 517.7 646 45.8
Carub.0004s1644 Capsella rubella HOM05D003539 ORTHO05D004111 2.1e-144 516.9 620 48.4
ECA233G1070 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-144 516.9 614 47.1
Nitab4.5_0000855g0080 Nicotiana tabacum HOM05D003539 ORTHO05D004111 6.1e-144 515.4 635 47.7
Aa31LG10G6570 Aethionema arabicum HOM05D003539 ORTHO05D004111 8.0e-144 515.0 628 46.8
Ca_21575_v3 Cicer arietinum L. HOM05D003539 ORTHO05D004111 1.4e-143 514.2 614 47.9
arahy.Tifrunner.gnm1.ann1.VZS2MK Arachis hypogaea HOM05D003539 ORTHO05D004111 3.9e-143 512.7 731 42.0
COL.COLO4_16224 Corchorus olitorius HOM05D003539 ORTHO05D004111 1.1e-142 511.1 620 47.6
Nitab4.5_0000588g0180 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.1e-142 511.1 635 47.9
Migut.A00468 Erythranthe guttata HOM05D003539 ORTHO05D004111 5.7e-142 508.8 629 44.7
Aqoxy3G00897 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 9.7e-142 508.1 604 49.8
arahy.Tifrunner.gnm1.ann1.UQ0JCX Arachis hypogaea HOM05D003539 ORTHO05D004111 9.7e-142 508.1 725 42.1
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.7e-141 507.3 585 48.0
Nitab4.5_0003096g0020 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.1e-140 504.6 651 46.2
AT2G34750 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 5.3e-140 502.3 620 46.5
ClCG05G001500 Citrullus lanatus HOM05D003539 ORTHO05D004111 9.1e-140 501.5 662 44.0
Sp4g17040 Schrenkiella parvula HOM05D003539 ORTHO05D004111 9.1e-140 501.5 607 46.6
SGA_v2.0_scaffold36G14401 Striga asiatica HOM05D003539 ORTHO05D004111 3.5e-139 499.6 626 44.9
CAN.G1428.5 Capsicum annuum HOM05D003539 ORTHO05D004111 4.5e-139 499.2 641 45.6
Thhalv10016395m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 7.7e-139 498.4 612 46.6
SGA_v2.0_scaffold172G38971 Striga asiatica HOM05D003539 ORTHO05D004111 1.0e-138 498.0 687 42.9
FAN28G2151 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.1e-137 494.6 644 45.2
Aa31LG6G11830 Aethionema arabicum HOM05D003539 ORTHO05D004111 1.5e-137 494.2 632 46.0
Thhalv10007103m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 1.9e-137 493.8 611 47.5
RcHm_v2.0_Chr2g0096801 Rosa chinensis HOM05D003539 ORTHO05D004111 1.9e-137 493.8 644 45.5
BcaB06g28796 Brassica carinata HOM05D003539 ORTHO05D004111 3.2e-137 493.0 610 46.1
FvH4_1g10010 Fragaria vesca HOM05D003539 ORTHO05D004111 5.5e-137 492.3 644 45.0
FAN26G1725 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.2e-136 491.1 644 45.0
Medtr4g117680 Medicago truncatula HOM05D003539 ORTHO05D004111 2.1e-136 490.3 644 45.0
arahy.Tifrunner.gnm1.ann1.JIK3X3 Arachis hypogaea HOM05D003539 ORTHO05D004111 6.1e-136 488.8 706 42.2
Carub.0001s2885 Capsella rubella HOM05D003539 ORTHO05D004111 1.4e-135 487.6 605 47.4
Solyc02g082340.3 Solanum lycopersicum HOM05D003539 ORTHO05D004111 1.4e-135 487.6 618 46.4
CARHR128910 Cardamine hirsuta HOM05D003539 ORTHO05D004111 1.8e-135 487.3 612 46.6
Sopen02g027000 Solanum pennellii HOM05D003539 ORTHO05D004111 1.5e-134 484.2 618 46.0
FAN19G1026 Fragaria x ananassa HOM05D003539 ORTHO05D004111 2.0e-134 483.8 655 44.3
AUR62006940 Chenopodium quinoa HOM05D003539 ORTHO05D004111 3.3e-134 483.0 622 45.2
Haze_00123 Corylus avellana HOM05D003539 ORTHO05D004111 5.7e-134 482.3 614 46.6
MELO3C006107.2 Cucumis melo HOM05D003539 ORTHO05D004111 1.3e-133 481.1 545 47.9
FAN23G2523 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.7e-133 480.7 663 43.7
TPR.G29658 Trifolium pratense HOM05D003539 ORTHO05D004111 4.8e-133 479.2 634 46.1
Psat3g044960 Pisum sativum HOM05D003539 ORTHO05D004111 6.3e-133 478.8 610 46.4
BolC3t14644H Brassica oleracea HOM05D003539 ORTHO05D004111 1.4e-132 477.6 614 45.3
C03p22480 Brassica napus HOM05D003539 ORTHO05D004111 2.4e-132 476.9 614 45.3
Ah.06g188300 Amaranthus hybridus HOM05D003539 ORTHO05D004111 3.1e-132 476.5 645 43.4
AL1G44630 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 4.1e-132 476.1 614 46.3
A03p19290 Brassica napus HOM05D003539 ORTHO05D004111 7.0e-132 475.3 619 44.9
BraA03t11183Z Brassica rapa HOM05D003539 ORTHO05D004111 9.1e-132 474.9 619 44.9
A04p26550 Brassica napus HOM05D003539 ORTHO05D004111 1.2e-131 474.6 620 45.6
Sc09g0001980 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.6e-131 474.2 527 49.0
BraA04t18159Z Brassica rapa HOM05D003539 ORTHO05D004111 1.0e-130 471.5 636 44.5
Cfa016374 Carpinus fangiana HOM05D003539 ORTHO05D004111 1.3e-130 471.1 561 47.2
Peaxi162Scf00677g00114 Petunia axillaris HOM05D003539 ORTHO05D004111 1.3e-130 471.1 637 44.7
HanXRQChr09g0270331 Helianthus annuus HOM05D003539 ORTHO05D004111 1.7e-130 470.7 602 44.9
CDE07G0217 Ceratophyllum demersum HOM05D003539 ORTHO05D004111 2.9e-130 469.9 549 47.5
Psat7g042440 Pisum sativum HOM05D003539 ORTHO05D004111 6.5e-130 468.8 657 44.0
Hund28202 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.1e-129 468.0 686 41.5
Hund28214 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.1e-129 468.0 686 41.5
SEGI_33601 Sequoiadendron giganteum HOM05D003539 ORTHO05D004111 3.6e-128 463.0 633 42.5
Os06g0688100 Oryza sativa ssp. japonica HOM05D003539 ORTHO05D004111 1.0e-127 461.5 640 42.2
unitig_699.g19839 Utricularia gibba HOM05D003539 ORTHO05D004111 1.3e-125 454.5 604 43.7
Actinidia28753 Actinidia chinensis HOM05D003539 ORTHO05D004111 7.0e-124 448.7 626 43.6
AT1G30590 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 1.7e-122 444.1 614 45.3
Duzib147G0916 Durio zibethinus HOM05D003539 ORTHO05D004111 2.9e-122 443.4 619 43.8
THA.LOC104798595 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 1.1e-121 441.4 566 44.7
Peaxi162Scf00344g01722 Petunia axillaris HOM05D003539 ORTHO05D004111 2.8e-120 436.8 668 42.2
AUR62000583 Chenopodium quinoa HOM05D003539 ORTHO05D004111 2.6e-118 430.3 621 41.4
Gohir.A02G120000 Gossypium hirsutum HOM05D003539 ORTHO05D004111 7.5e-118 428.7 458 52.0
BraA05t20035Z Brassica rapa HOM05D003539 ORTHO05D004111 1.3e-114 417.9 608 42.4
ATR0605G358 Amborella trichopoda HOM05D003539 ORTHO05D004111 2.3e-114 417.2 568 42.1
BolC4t22991H Brassica oleracea HOM05D003539 ORTHO05D004111 3.6e-112 409.8 612 41.5
Zm00001eb226160 Zea mays HOM05D003539 ORTHO05D004111 2.3e-111 407.1 595 42.5
Peaxi162Scf00015g00939 Petunia axillaris HOM05D003539 ORTHO05D004111 3.0e-111 406.8 636 41.0
AL4G35010 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.5e-110 404.4 608 43.1
C04p14010 Brassica napus HOM05D003539 ORTHO05D004111 1.5e-110 404.4 612 41.3
Pp3c18_6750 Physcomitrium patens HOM05D003539 ORTHO05D004111 1.9e-108 397.5 613 37.7
Pp3c18_6751 Physcomitrium patens HOM05D003539 ORTHO05D004111 1.9e-108 397.5 613 37.7
Pp3c21_14490 Physcomitrium patens HOM05D003539 ORTHO05D004111 1.6e-107 394.4 623 36.8
BcaC06g35972 Brassica carinata HOM05D003539 ORTHO05D004111 2.7e-107 393.7 611 42.4
Carub.0004s2129 Capsella rubella HOM05D003539 ORTHO05D004111 1.3e-106 391.3 603 41.1
AT2G39240 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 2.3e-106 390.6 623 41.9
C07p01640 Brassica napus HOM05D003539 ORTHO05D004111 4.3e-105 386.3 581 43.5
Mapoly0144s0013 Marchantia polymorpha HOM05D003539 ORTHO05D004111 9.5e-105 385.2 612 38.1
SMO356G0429 Selaginella moellendorffii HOM05D003539 ORTHO05D004111 1.7e-101 374.4 621 37.0
BcaC02g11551 Brassica carinata HOM05D003539 ORTHO05D004111 9.9e-94 348.6 616 38.6
AL4G36550 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 6.4e-85 319.3 590 38.6
C04p63970 Brassica napus HOM05D003539 ORTHO05D004111 1.1e-84 318.5 445 42.7
AagrBONN_evm.TU.Sc2ySwM_368.2744 Anthoceros agrestis HOM05D003539 ORTHO05D004111 3.2e-84 317.0 548 35.9
BcaC01g05764 Brassica carinata HOM05D003539 ORTHO05D004111 2.3e-82 310.8 400 44.0
HPP92_018392 Vanilla planifolia HOM05D003539 ORTHO05D004111 1.2e-80 305.1 441 39.5
SalBow7G2073 Salvia bowleyana HOM05D003539 ORTHO05D004111 8.1e-80 302.4 363 47.7
C07p01430 Brassica napus HOM05D003539 ORTHO05D004111 6.9e-79 299.3 449 43.4
Actinidia20762 Actinidia chinensis HOM05D003539 ORTHO05D004111 2.3e-74 284.3 296 53.4
Actinidia02872 Actinidia chinensis HOM05D003539 ORTHO05D004111 1.5e-73 281.6 335 47.2
FAN23G0637 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.5e-70 271.6 384 43.2
Actinidia20763 Actinidia chinensis HOM05D003539 ORTHO05D004111 1.1e-68 265.4 347 46.4
PSO782G3432 Papaver somniferum HOM05D003539 ORTHO05D004111 6.9e-63 246.1 315 47.9
BolC4t27866H Brassica oleracea HOM05D003539 ORTHO05D004111 6.2e-56 223.0 247 51.0
Oeu000297.1 Olea europaea HOM05D003539 ORTHO05D004111 5.3e-55 219.9 247 49.0
DCAR_007550 Daucus carota HOM05D003539 ORTHO05D004111 1.5e-54 218.4 263 46.8
BcaC06g35980 Brassica carinata HOM05D003539 ORTHO05D004111 1.3e-53 215.3 261 48.7
SHI13961 Sapria himalayana HOM05D003539 ORTHO05D004111 4.2e-52 210.3 354 41.0
SalBow7G0297 Salvia bowleyana HOM05D003539 ORTHO05D004111 9.3e-52 209.1 260 45.0
Cre03.g207950 Chlamydomonas reinhardtii HOM05D003539 ORTHO05D004111 2.5e-49 201.1 627 25.7
BcaB05g23816 Brassica carinata HOM05D003539 ORTHO05D004111 6.7e-42 176.4 324 38.6
Ciclev10010838m.g Citrus clementina HOM05D003539 ORTHO05D004111 2.0e-41 174.9 186 51.6
DCAR_007549 Daucus carota HOM05D003539 ORTHO05D004111 1.7e-40 171.8 193 48.7
GSVIVG01026439001 Vitis vinifera HOM05D003539 ORTHO05D004111 1.4e-39 168.7 163 50.9
PRCOL_00004831 Prasinoderma coloniale HOM05D003539 ORTHO05D004111 4.5e-38 163.7 555 25.6
Gohir.A02G119802 Gossypium hirsutum HOM05D003539 ORTHO05D004111 2.8e-32 144.4 176 47.7
CBR_g23271 Chara braunii HOM05D003539 ORTHO05D004111 7.0e-31 139.8 360 30.3
CBR_g23267 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-29 134.8 188 38.8
RcHm_v2.0_Chr2g0096841 Rosa chinensis HOM05D003539 ORTHO05D004111 1.4e-28 132.1 201 41.3
arahy.Tifrunner.gnm1.ann1.PJLZ8M Arachis hypogaea HOM05D003539 ORTHO05D004111 7.2e-28 129.8 151 49.0
MCO15G598 Micromonas commoda HOM05D003539 ORTHO05D004111 9.4e-28 129.4 642 23.4
Cfa022324 Carpinus fangiana HOM05D003539 ORTHO05D004111 3.6e-27 127.5 620 22.6
BcaC06g35981 Brassica carinata HOM05D003539 ORTHO05D004111 3.1e-23 114.4 190 39.5
EL10Ac6g14558 Beta vulgaris HOM05D003539 ORTHO05D004111 1.0e-21 109.4 109 53.2
Cpa.g.sc7.212 Carica papaya HOM05D003539 ORTHO05D004111 2.7e-19 101.3 176 37.5
Cfa022001 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.7e-19 101.3 138 39.9
HanXRQChr05g0145981 Helianthus annuus HOM05D003539 ORTHO05D004111 8.8e-18 96.3 175 34.3
Cpa.g.sc7.213 Carica papaya HOM05D003539 ORTHO05D004111 1.1e-15 89.4 78 50.0
C03p59690 Brassica napus HOM05D003539 ORTHO05D004111 8.0e-11 73.2 74 48.6
BolC3t18231H Brassica oleracea HOM05D003539 ORTHO05D004111 8.0e-11 73.2 74 48.6
Medtr8g085920 Medicago truncatula HOM05D003539 ORTHO05D004111 6.8e-10 70.1 78 52.6
Potri.007G065101 Populus trichocarpa HOM05D003539 ORTHO05D004111 5.4e-07 60.5 142 34.5
Medtr4g117730 Medicago truncatula HOM05D003539 ORTHO05D004111 7.0e-07 60.1 59 52.5


User provided reference genes

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