Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00007011 Prasinoderma coloniale HOM05D004669 ORTHO05D000387 0.0e+00 3680.6 1994 100.0
Cre17.g723450 Chlamydomonas reinhardtii HOM05D010245 ORTHO05D017828 7.5e-10 71.6 382 26.2
Haze_07633 Corylus avellana HOM05D000453 ORTHO05D000387 3.7e-09 69.3 248 28.2
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 3.2e-08 66.2 187 27.8
Psat4g061960 Pisum sativum HOM05D000453 ORTHO05D000387 3.5e-07 62.8 234 28.2
Eucgr.K02880 Eucalyptus grandis HOM05D000453 ORTHO05D000387 4.6e-07 62.4 245 27.3
Oeu044595.1 Olea europaea HOM05D000453 ORTHO05D000387 1.3e-06 60.8 244 24.6
Sed0027531 Sechium edule HOM05D004669 ORTHO05D005767 1.7e-06 60.5 169 29.0
THA.LOC104820400 Tarenaya hassleriana HOM05D003769 ORTHO05D004521 1.7e-06 60.5 460 22.6
Aa31LG10G4900 Aethionema arabicum HOM05D003769 ORTHO05D004521 2.3e-06 60.1 439 23.0
COL.COLO4_12887 Corchorus olitorius HOM05D004669 ORTHO05D005767 2.3e-06 60.1 205 27.3
Medtr4g104410 Medicago truncatula HOM05D000453 ORTHO05D000387 3.0e-06 59.7 229 27.5
AagrBONN_evm.TU.Sc2ySwM_228.5273 Anthoceros agrestis HOM05D004669 ORTHO05D005767 3.9e-06 59.3 154 29.2
CARHR039080 Cardamine hirsuta HOM05D003769 ORTHO05D004521 3.9e-06 59.3 442 22.2
Psat0s4195g0120 Pisum sativum HOM05D004669 ORTHO05D005767 3.9e-06 59.3 173 28.3
TWI12G0769 Tripterygium wilfordii HOM05D004669 ORTHO05D005767 3.9e-06 59.3 173 28.3
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 5.1e-06 58.9 244 24.2
Cpa.g.sc10.221 Carica papaya HOM05D004669 ORTHO05D005767 5.1e-06 58.9 173 28.9
Ca_02514_v3 Cicer arietinum L. HOM05D004669 ORTHO05D005767 5.1e-06 58.9 173 28.3
Migut.I00803 Erythranthe guttata HOM05D004669 ORTHO05D005767 5.1e-06 58.9 173 27.7
HanXRQChr04g0096711 Helianthus annuus HOM05D004669 ORTHO05D005767 5.1e-06 58.9 173 27.7
HanXRQChr04g0097171 Helianthus annuus HOM05D004669 ORTHO05D005767 5.1e-06 58.9 173 27.7
Lsat_1_v5_gn_1_33541 Lactuca sativa HOM05D004669 ORTHO05D005767 5.1e-06 58.9 173 27.7
QL10p005908 Quercus lobata HOM05D000453 ORTHO05D000387 5.1e-06 58.9 251 27.1
AUR62011570 Chenopodium quinoa HOM05D004669 ORTHO05D005767 6.6e-06 58.5 173 27.2
AUR62016387 Chenopodium quinoa HOM05D004669 ORTHO05D005767 6.6e-06 58.5 173 27.2
Sc12g0008880 Simmondsia chinensis HOM05D004669 ORTHO05D005767 6.6e-06 58.5 173 27.2
Lalb_Chr03g0025731 Lupinus albus HOM05D003825 ORTHO05D004491 8.6e-06 58.2 376 22.9
Thecc.06G074100 Theobroma cacao HOM05D004669 ORTHO05D005767 8.6e-06 58.2 173 27.7


User provided reference genes

Program Settings