Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 1.3e-65 253.1 146 100.0
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 7.7e-21 104.4 101 47.5
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.7e-20 103.2 100 50.0
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 3.8e-20 102.1 94 50.0
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 3.8e-20 102.1 94 50.0
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 3.8e-20 102.1 103 46.6
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 5.0e-20 101.7 103 47.6
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.1e-19 100.5 106 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.4e-19 100.1 103 46.6
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 2.5e-19 99.4 104 45.2
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 2.5e-19 99.4 111 44.1
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 4.2e-19 98.6 94 48.9
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 5.5e-19 98.2 103 45.6
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 5.5e-19 98.2 103 45.6
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 5.5e-19 98.2 103 45.6
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 7.2e-19 97.8 103 45.6
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 7.2e-19 97.8 114 41.2
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 9.4e-19 97.4 103 45.6
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 9.4e-19 97.4 101 44.6
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 9.4e-19 97.4 103 44.7
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 2.1e-18 96.3 114 41.2
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 2.1e-18 96.3 98 45.9
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 2.1e-18 96.3 103 46.6
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 2.1e-18 96.3 92 47.8
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 2.7e-18 95.9 101 46.5
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 2.7e-18 95.9 105 43.8
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 2.7e-18 95.9 114 41.2
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 3.6e-18 95.5 115 41.7
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 3.6e-18 95.5 114 41.2
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 3.6e-18 95.5 104 43.3
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 3.6e-18 95.5 114 42.1
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 4.7e-18 95.1 101 43.6
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 4.7e-18 95.1 103 43.7
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 4.7e-18 95.1 103 44.7
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 4.7e-18 95.1 91 48.4
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 4.7e-18 95.1 103 44.7
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 6.1e-18 94.7 114 41.2
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 6.1e-18 94.7 114 40.4
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 6.1e-18 94.7 114 40.4
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 8.0e-18 94.4 101 44.6
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 8.0e-18 94.4 95 45.3
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 8.0e-18 94.4 103 42.7
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 1.0e-17 94.0 114 40.4
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 1.0e-17 94.0 103 42.7
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.0e-17 94.0 111 40.5
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 1.0e-17 94.0 103 43.7
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.0e-17 94.0 103 43.7
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 1.0e-17 94.0 103 43.7
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 1.0e-17 94.0 103 43.7
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 1.4e-17 93.6 114 40.4
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.4e-17 93.6 95 45.3
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 1.4e-17 93.6 103 45.6
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.4e-17 93.6 101 43.6
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 1.8e-17 93.2 103 43.7
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.8e-17 93.2 101 43.6
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 1.8e-17 93.2 103 43.7
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 1.8e-17 93.2 103 43.7
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 1.8e-17 93.2 103 43.7
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 1.8e-17 93.2 115 40.0
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 2.3e-17 92.8 105 42.9
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 2.3e-17 92.8 103 42.7
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 2.3e-17 92.8 103 41.7
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 2.3e-17 92.8 103 43.7
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.3e-17 92.8 101 42.6
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 3.9e-17 92.0 96 44.8
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 3.9e-17 92.0 103 42.7
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 42.7
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 42.7
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 42.7
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 42.7
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 42.7
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 5.2e-17 91.7 101 44.6
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 43.7
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 5.2e-17 91.7 103 42.7
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 6.7e-17 91.3 103 42.7
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 6.7e-17 91.3 111 38.7
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 6.7e-17 91.3 91 45.1
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.1e-16 90.5 96 44.8
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.1e-16 90.5 103 41.7
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.1e-16 90.5 103 42.7
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 1.5e-16 90.1 101 40.6
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 1.5e-16 90.1 95 43.2
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 2.0e-16 89.7 103 41.7
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 2.0e-16 89.7 103 41.7
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 2.0e-16 89.7 99 44.4
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 2.0e-16 89.7 103 40.8
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.0e-16 89.7 91 45.1
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.0e-16 89.7 103 40.8
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 2.0e-16 89.7 95 43.2
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 3.3e-16 89.0 103 40.8
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 5.7e-16 88.2 103 44.7
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 5.7e-16 88.2 94 44.7
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 5.7e-16 88.2 103 39.8
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 7.4e-16 87.8 96 43.8
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 7.4e-16 87.8 111 36.0
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 7.4e-16 87.8 103 39.8
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 7.4e-16 87.8 103 40.8
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 7.4e-16 87.8 103 40.8
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 7.4e-16 87.8 114 37.7
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 2.2e-15 86.3 116 37.9
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 2.2e-15 86.3 116 37.9
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 2.2e-15 86.3 116 37.9
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 2.2e-15 86.3 101 41.6
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 2.2e-15 86.3 101 39.6
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 2.2e-15 86.3 101 39.6
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 3.7e-15 85.5 91 42.9
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 3.7e-15 85.5 91 42.9
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 3.7e-15 85.5 93 41.9
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 3.7e-15 85.5 101 38.6
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 4.8e-15 85.1 93 41.9
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 4.8e-15 85.1 105 41.0
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 6.3e-15 84.7 101 40.6
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 6.3e-15 84.7 101 40.6
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 6.3e-15 84.7 101 40.6
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 6.3e-15 84.7 101 40.6
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 6.3e-15 84.7 101 40.6
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 8.2e-15 84.3 99 41.4
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 8.2e-15 84.3 99 40.4
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 1.1e-14 84.0 91 41.8
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 1.1e-14 84.0 86 44.2
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 1.1e-14 84.0 100 42.0
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 1.8e-14 83.2 101 38.6
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 2.4e-14 82.8 99 42.4
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 4.1e-14 82.0 110 38.2
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 7.0e-14 81.3 101 36.6
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 9.1e-14 80.9 112 38.4
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 9.1e-14 80.9 94 41.5
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 1.2e-13 80.5 130 34.6
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.6e-13 79.3 86 45.3
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 2.6e-13 79.3 119 36.1
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 7.7e-13 77.8 70 48.6
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.7e-12 76.6 107 36.4
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 2.9e-12 75.9 89 40.4
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.9e-12 75.9 104 39.4
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 3.8e-12 75.5 72 45.8
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 1.1e-11 73.9 152 27.6
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.5e-11 73.6 70 44.3
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 1.5e-11 73.6 78 43.6
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 9.4e-11 70.9 101 39.6
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.2e-10 70.5 89 39.3
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 6.1e-10 68.2 63 46.0
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.8e-09 66.6 141 28.4
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 5.2e-09 65.1 148 27.7
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 2.6e-08 62.8 82 40.2
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 8.2e-07 57.8 114 32.5
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.4e-06 57.0 114 32.5
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 1.4e-06 57.0 76 39.5
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.8e-06 56.6 76 36.8


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