Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006677 Prasinoderma coloniale HOM05D016293 ORTHO05D018978 3.5e-186 654.8 337 100.0
PRCOL_00004786 Prasinoderma coloniale HOM05D016293 ORTHO05D018978 3.0e-44 183.3 292 41.1
MCO05G016 Micromonas commoda HOM05D016293 ORTHO05D018978 1.1e-43 181.4 262 43.9
Mapoly0071s0039 Marchantia polymorpha HOM05D016293 ORTHO05D018978 5.7e-35 152.5 376 35.4
Cre08.g376500 Chlamydomonas reinhardtii HOM05D016293 ORTHO05D018978 1.3e-31 141.4 294 34.7
Pp3c21_8660 Physcomitrium patens HOM05D016293 ORTHO05D018978 3.7e-18 96.7 192 35.9
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 2.8e-10 70.5 264 29.2
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 1.1e-09 68.6 275 31.6
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 2.4e-09 67.4 323 28.5
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 2.0e-08 64.3 212 30.2
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 3.5e-08 63.5 175 31.4
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 1.3e-07 61.6 225 30.7
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 1.7e-07 61.2 206 29.6
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 1.7e-07 61.2 211 28.0
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 1.7e-07 61.2 208 28.4
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 2.2e-07 60.8 264 29.5
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 2.2e-07 60.8 234 30.8
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 6.5e-07 59.3 236 29.7
Ca_29136_v3 Cicer arietinum L. HOM05D016293 ORTHO05D018978 1.5e-06 58.2 214 26.2
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 1.9e-06 57.8 242 28.5
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 1.9e-06 57.8 217 27.2
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.5e-06 57.4 312 28.5
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 2.5e-06 57.4 263 30.0
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 3.2e-06 57.0 291 26.1
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 3.2e-06 57.0 291 26.1
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 4.2e-06 56.6 265 29.1
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 4.2e-06 56.6 307 29.0
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 5.5e-06 56.2 306 28.8
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 5.5e-06 56.2 181 31.5
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 5.5e-06 56.2 286 26.9
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 7.2e-06 55.8 199 30.7
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 7.2e-06 55.8 254 29.5
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 9.5e-06 55.5 210 29.0
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 9.5e-06 55.5 303 26.7


User provided reference genes

Program Settings