Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004769 Prasinoderma coloniale HOM05D004725 ORTHO05D005683 3.4e-132 474.9 231 100.0
SEGI_00745 Sequoiadendron giganteum HOM05D004725 ORTHO05D005683 1.0e-19 101.3 211 31.8
PSO384G4206 Papaver somniferum HOM05D004725 ORTHO05D005683 1.1e-18 97.8 226 29.2
Aqoxy6G02121 Aquilegia oxysepala HOM05D004725 ORTHO05D005683 9.6e-18 94.7 223 26.5
ATR0691G022 Amborella trichopoda HOM05D004725 ORTHO05D005683 2.1e-17 93.6 198 30.8
Zm00001eb108600 Zea mays HOM05D004725 ORTHO05D005683 2.1e-17 93.6 233 30.9
Os05g0143400 Oryza sativa ssp. japonica HOM05D004725 ORTHO05D005683 8.2e-17 91.7 211 32.2
PSO782G1146 Papaver somniferum HOM05D004725 ORTHO05D005683 1.1e-16 91.3 224 28.1
DCAR_030461 Daucus carota HOM05D004725 ORTHO05D005683 1.4e-16 90.9 214 31.3
GSVIVG01034975001 Vitis vinifera HOM05D004725 ORTHO05D005683 1.4e-16 90.9 226 26.5
Cc00_g03440 Coffea canephora HOM05D004725 ORTHO05D005683 2.4e-16 90.1 212 30.2
PSO063G5877 Papaver somniferum HOM05D004725 ORTHO05D005683 2.4e-16 90.1 226 27.4
Sed0009995 Sechium edule HOM05D004725 ORTHO05D005683 3.1e-16 89.7 242 28.9
Glyma.08G194400 Glycine max HOM05D004725 ORTHO05D005683 5.3e-16 89.0 214 31.3
CiPaw.02G073900 Carya illinoinensis HOM05D004725 ORTHO05D005683 6.9e-16 88.6 210 28.1
TAR376G0735 Trochodendron aralioides HOM05D004725 ORTHO05D005683 9.0e-16 88.2 213 27.2
MBI18_g03518_MAGBIO Magnolia biondii HOM05D004725 ORTHO05D005683 1.2e-15 87.8 211 28.9
ClCG05G001400 Citrullus lanatus HOM05D004725 ORTHO05D005683 1.5e-15 87.4 242 28.9
MCO14G052 Micromonas commoda HOM05D004725 ORTHO05D005683 2.0e-15 87.0 260 28.8
VMungo0331G0107 Vigna mungo HOM05D004725 ORTHO05D005683 2.0e-15 87.0 216 27.8
CSS0037380 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 3.4e-15 86.3 213 28.6
MSTRG.3853 Avicennia marina HOM05D004725 ORTHO05D005683 4.5e-15 85.9 212 30.2
SMO351G0117 Selaginella moellendorffii HOM05D004725 ORTHO05D005683 4.5e-15 85.9 231 28.1
CDE02G0725 Ceratophyllum demersum HOM05D004725 ORTHO05D005683 7.6e-15 85.1 210 28.6
Thhalv10004892m.g Eutrema salsugineum HOM05D004725 ORTHO05D005683 1.0e-14 84.7 213 29.6
Lj3g0003769 Lotus japonicus HOM05D004725 ORTHO05D005683 1.3e-14 84.3 214 29.4
Oeu038772.1 Olea europaea HOM05D004725 ORTHO05D005683 1.3e-14 84.3 212 30.2
Phvul.010G140100 Phaseolus vulgaris HOM05D004725 ORTHO05D005683 1.3e-14 84.3 216 27.8
THA.LOC104827096 Tarenaya hassleriana HOM05D004725 ORTHO05D005683 1.3e-14 84.3 210 29.5
Sp2g19380 Schrenkiella parvula HOM05D004725 ORTHO05D005683 1.7e-14 84.0 213 30.0
CsaV3_3G008790 Cucumis sativus L. HOM05D004725 ORTHO05D005683 2.2e-14 83.6 220 28.2
Aa31LG11G8130 Aethionema arabicum HOM05D004725 ORTHO05D005683 2.9e-14 83.2 212 28.3
Manes.03G206000 Manihot esculenta HOM05D004725 ORTHO05D005683 2.9e-14 83.2 211 27.0
PGSC0003DMG400007347 Solanum tuberosum HOM05D004725 ORTHO05D005683 2.9e-14 83.2 215 29.8
Lsat_1_v5_gn_8_139661 Lactuca sativa HOM05D004725 ORTHO05D005683 3.8e-14 82.8 213 29.1
Nn3g21748 Nelumbo nucifera HOM05D004725 ORTHO05D005683 4.9e-14 82.4 212 26.4
SGA_v2.0_scaffold157G37322 Striga asiatica HOM05D004725 ORTHO05D005683 6.5e-14 82.0 212 30.7
PGR031G0191 Punica granatum HOM05D004725 ORTHO05D005683 8.4e-14 81.6 218 29.8
Carub.0008s0897 Capsella rubella HOM05D004725 ORTHO05D005683 1.1e-13 81.3 212 27.4
Solyc11g065900.2 Solanum lycopersicum HOM05D004725 ORTHO05D005683 1.1e-13 81.3 215 29.3
Sopen11g025640 Solanum pennellii HOM05D004725 ORTHO05D005683 1.1e-13 81.3 215 29.3
unitig_37.g12782 Utricularia gibba HOM05D004725 ORTHO05D005683 1.1e-13 81.3 212 28.8
CARHR056790 Cardamine hirsuta HOM05D004725 ORTHO05D005683 1.4e-13 80.9 212 27.8
ECA236G4776 Erigeron canadensis HOM05D004725 ORTHO05D005683 1.4e-13 80.9 213 26.8
Psat1g138600 Pisum sativum HOM05D004725 ORTHO05D005683 1.4e-13 80.9 215 28.8
HanXRQChr10g0291591 Helianthus annuus HOM05D004725 ORTHO05D005683 1.9e-13 80.5 213 27.7
SalBow8G1743 Salvia bowleyana HOM05D004725 ORTHO05D005683 2.5e-13 80.1 212 28.3
AT5G49010 Arabidopsis thaliana HOM05D004725 ORTHO05D005683 3.2e-13 79.7 212 27.4
BolC7t44486H Brassica oleracea HOM05D004725 ORTHO05D005683 3.2e-13 79.7 211 29.4
Carub.0008s0882 Capsella rubella HOM05D004725 ORTHO05D005683 3.2e-13 79.7 213 29.1
AL8G22680 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 4.2e-13 79.3 212 27.4
Migut.G00073 Erythranthe guttata HOM05D004725 ORTHO05D005683 4.2e-13 79.3 213 29.6
Nitab4.5_0000160g0190 Nicotiana tabacum HOM05D004725 ORTHO05D005683 5.5e-13 79.0 222 27.9
CANSAT35G1772 Cannabis sativa HOM05D004725 ORTHO05D005683 7.1e-13 78.6 223 25.6
HanXRQChr17g0554971 Helianthus annuus HOM05D004725 ORTHO05D005683 7.1e-13 78.6 213 27.2
A06p38630 Brassica napus HOM05D004725 ORTHO05D005683 9.3e-13 78.2 211 29.4
C07p39630 Brassica napus HOM05D004725 ORTHO05D005683 9.3e-13 78.2 211 29.4
BraA06t26778Z Brassica rapa HOM05D004725 ORTHO05D005683 9.3e-13 78.2 211 29.4
CSS0018454 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 9.3e-13 78.2 208 27.9
Mapoly0029s0136 Marchantia polymorpha HOM05D004725 ORTHO05D005683 9.3e-13 78.2 207 28.5
TPR.G27119 Trifolium pratense HOM05D004725 ORTHO05D005683 9.3e-13 78.2 215 28.4
Glyma.07G011200 Glycine max HOM05D004725 ORTHO05D005683 2.1e-12 77.0 177 30.5
FAN07G1636 Fragaria x ananassa HOM05D004725 ORTHO05D005683 7.9e-12 75.1 223 26.5
Peaxi162Scf00057g02232 Petunia axillaris HOM05D004725 ORTHO05D005683 7.9e-12 75.1 224 28.1
RcHm_v2.0_Chr4g0425721 Rosa chinensis HOM05D004725 ORTHO05D005683 1.0e-11 74.7 225 26.7
Eucgr.D00314 Eucalyptus grandis HOM05D004725 ORTHO05D005683 1.8e-11 73.9 217 26.7
FvH4_4g13700 Fragaria vesca HOM05D004725 ORTHO05D005683 1.8e-11 73.9 222 26.6
Oeu001165.1 Olea europaea HOM05D004725 ORTHO05D005683 1.8e-11 73.9 233 26.6
Sabra08G0078400 Salix brachista HOM05D004725 ORTHO05D005683 1.8e-11 73.9 212 24.5
Actinidia31555 Actinidia chinensis HOM05D004725 ORTHO05D005683 3.0e-11 73.2 211 28.9
AL8G22360 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 3.0e-11 73.2 229 25.8
Medtr2g044210 Medicago truncatula HOM05D004725 ORTHO05D005683 3.9e-11 72.8 179 27.4
Potri.008G103800 Populus trichocarpa HOM05D004725 ORTHO05D005683 3.9e-11 72.8 211 26.1
AagrBONN_evm.TU.Sc2ySwM_228.2917 Anthoceros agrestis HOM05D004725 ORTHO05D005683 5.1e-11 72.4 213 24.4
CBR_g34308 Chara braunii HOM05D004725 ORTHO05D005683 5.1e-11 72.4 209 25.4
TWI09G0594 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 5.1e-11 72.4 210 26.2
QL06p012630 Quercus lobata HOM05D004725 ORTHO05D005683 8.7e-11 71.6 177 26.0
Ciclev10005849m.g Citrus clementina HOM05D004725 ORTHO05D005683 1.1e-10 71.2 184 26.1
Lj3A833G37 Lonicera japonica HOM05D004725 ORTHO05D005683 1.5e-10 70.9 211 27.0
Pp3c12_20580 Physcomitrium patens HOM05D004725 ORTHO05D005683 1.5e-10 70.9 211 26.5
BcaC06g30733 Brassica carinata HOM05D004725 ORTHO05D005683 1.9e-10 70.5 185 29.2
SalBow6G0528 Salvia bowleyana HOM05D004725 ORTHO05D005683 3.3e-10 69.7 212 25.9
Ca_09654_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 4.3e-10 69.3 181 26.5
Dinv15152 Davidia involucrata HOM05D004725 ORTHO05D005683 5.7e-10 68.9 188 29.3
Gohir.D10G179900 Gossypium hirsutum HOM05D004725 ORTHO05D005683 9.7e-10 68.2 162 28.4
arahy.Tifrunner.gnm1.ann1.ASV3U0 Arachis hypogaea HOM05D004725 ORTHO05D005683 1.3e-09 67.8 252 25.4
SHI00123 Sapria himalayana HOM05D004725 ORTHO05D005683 1.3e-09 67.8 211 26.5
Gohir.A10G173400 Gossypium hirsutum HOM05D004725 ORTHO05D005683 2.2e-09 67.0 162 27.8
Prupe.1G115500 Prunus persica HOM05D004725 ORTHO05D005683 2.2e-09 67.0 205 25.9
Thecc.04G302700 Theobroma cacao HOM05D004725 ORTHO05D005683 2.2e-09 67.0 168 28.0
Gorai.011G201500 Gossypium raimondii HOM05D004725 ORTHO05D005683 3.7e-09 66.2 162 27.8
Nitab4.5_0002789g0040 Nicotiana tabacum HOM05D004725 ORTHO05D005683 3.7e-09 66.2 214 27.1
COL.COLO4_34597 Corchorus olitorius HOM05D004725 ORTHO05D005683 4.8e-09 65.9 162 28.4
MELO3C006096.2 Cucumis melo HOM05D004725 ORTHO05D005683 6.3e-09 65.5 234 25.2
BcaC06g30731 Brassica carinata HOM05D004725 ORTHO05D005683 8.2e-09 65.1 141 31.9
COL.COLO4_09634 Corchorus olitorius HOM05D004725 ORTHO05D005683 1.1e-08 64.7 168 26.8
GSVIVG01034912001 Vitis vinifera HOM05D004725 ORTHO05D005683 2.4e-08 63.5 215 23.3
Duzib212G0103 Durio zibethinus HOM05D004725 ORTHO05D005683 3.1e-08 63.2 162 27.2
vmacro08028 Vaccinium macrocarpon HOM05D004725 ORTHO05D005683 4.1e-08 62.8 216 26.9
HPP92_027744 Vanilla planifolia HOM05D004725 ORTHO05D005683 6.9e-08 62.0 185 25.4
Ah.13g071340 Amaranthus hybridus HOM05D004725 ORTHO05D005683 4.5e-07 59.3 197 24.9
CARHR182700 Cardamine hirsuta HOM05D004725 ORTHO05D005683 5.9e-07 58.9 192 25.0
Haze_01314 Corylus avellana HOM05D004725 ORTHO05D005683 7.7e-07 58.5 140 25.7
Cpa.g.sc9.42 Carica papaya HOM05D004725 ORTHO05D005683 1.3e-06 57.8 105 34.3
Ca_02282_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 3.8e-06 56.2 84 34.5
Atru.chr4.3042 Acer truncatum HOM05D004725 ORTHO05D005683 5.0e-06 55.8 132 28.0
CAN.G598.3 Capsicum annuum HOM05D004725 ORTHO05D005683 5.0e-06 55.8 132 31.1
FAN12G0673 Fragaria x ananassa HOM05D004725 ORTHO05D005683 6.5e-06 55.5 201 24.9
Rhsim05G0134600 Rhododendron simsii HOM05D004725 ORTHO05D005683 8.5e-06 55.1 187 27.8


User provided reference genes

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