Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003458 Prasinoderma coloniale HOM05D000041 ORTHO05D006140 4.9e-202 707.6 358 100.0
CiPaw.11G047400 Carya illinoinensis HOM05D000041 ORTHO05D006140 1.7e-13 81.3 234 29.1
vmacro16523 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 1.1e-12 78.6 137 35.0
Pp3c15_14620 Physcomitrium patens HOM05D000041 ORTHO05D006140 1.9e-12 77.8 203 32.5
SEGI_30138 Sequoiadendron giganteum HOM05D000041 ORTHO05D006140 1.9e-12 77.8 142 33.1
CANSAT80G0179 Cannabis sativa HOM05D000041 ORTHO05D006140 2.5e-12 77.4 176 31.2
Rhsim12G0153700 Rhododendron simsii HOM05D000041 ORTHO05D006140 2.5e-12 77.4 189 30.7
Thhalv10007493m.g Eutrema salsugineum HOM05D000041 ORTHO05D006140 3.2e-12 77.0 200 32.5
Zm00001eb020460 Zea mays HOM05D000041 ORTHO05D006140 5.5e-12 76.3 145 33.8
ATR0730G006 Amborella trichopoda HOM05D000041 ORTHO05D006140 7.2e-12 75.9 193 31.1
MD06G1197800 Malus domestica HOM05D000041 ORTHO05D006140 7.2e-12 75.9 192 30.2
QL10p017885 Quercus lobata HOM05D000041 ORTHO05D006140 7.2e-12 75.9 258 28.3
Sp1g16630 Schrenkiella parvula HOM05D000041 ORTHO05D006140 9.4e-12 75.5 200 31.5
FAN08G1333 Fragaria x ananassa HOM05D000041 ORTHO05D006140 1.2e-11 75.1 145 32.4
vmacro17573 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 1.2e-11 75.1 204 30.4
A06p14770 Brassica napus HOM05D000041 ORTHO05D006140 1.6e-11 74.7 200 31.5
BraA06t24600Z Brassica rapa HOM05D000041 ORTHO05D006140 1.6e-11 74.7 200 31.5
CARHR019290 Cardamine hirsuta HOM05D000041 ORTHO05D006140 1.6e-11 74.7 200 31.5
AL1G31110 Arabidopsis lyrata HOM05D000041 ORTHO05D006140 2.1e-11 74.3 159 33.3
BcaC05g25761 Brassica carinata HOM05D000041 ORTHO05D006140 2.1e-11 74.3 200 31.5
C05p16920 Brassica napus HOM05D000041 ORTHO05D006140 2.1e-11 74.3 200 31.5
C08p43200 Brassica napus HOM05D000041 ORTHO05D006140 2.7e-11 73.9 200 32.0
BolC5t30395H Brassica oleracea HOM05D000041 ORTHO05D006140 2.7e-11 73.9 200 31.5
FvH4_5g14510 Fragaria vesca HOM05D000041 ORTHO05D006140 2.7e-11 73.9 255 27.8
MCO11G242 Micromonas commoda HOM05D000041 ORTHO05D006140 2.7e-11 73.9 284 29.2
Thecc.03G094500 Theobroma cacao HOM05D000041 ORTHO05D006140 2.7e-11 73.9 145 31.0
A09p59780 Brassica napus HOM05D000041 ORTHO05D006140 3.6e-11 73.6 200 31.5
Actinidia19018 Actinidia chinensis HOM05D000041 ORTHO05D006140 4.7e-11 73.2 145 31.7
BcaB03g14492 Brassica carinata HOM05D000041 ORTHO05D006140 4.7e-11 73.2 200 31.5
BraA09t41355Z Brassica rapa HOM05D000041 ORTHO05D006140 4.7e-11 73.2 200 31.5
Carub.0001s1829 Capsella rubella HOM05D000041 ORTHO05D006140 4.7e-11 73.2 200 32.0
FAN18G2506 Fragaria x ananassa HOM05D000041 ORTHO05D006140 4.7e-11 73.2 260 28.5
Aa31LG7G3420 Aethionema arabicum HOM05D000041 ORTHO05D006140 6.1e-11 72.8 200 30.5
Ciclev10020015m.g Citrus clementina HOM05D000041 ORTHO05D006140 6.1e-11 72.8 147 34.0
Eucgr.B00542 Eucalyptus grandis HOM05D000041 ORTHO05D006140 6.1e-11 72.8 145 32.4
CDE04G1628 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 7.9e-11 72.4 191 29.8
Duzib084G1175 Durio zibethinus HOM05D000041 ORTHO05D006140 7.9e-11 72.4 145 31.7
Aqoxy3G03493 Aquilegia oxysepala HOM05D000041 ORTHO05D006140 1.0e-10 72.0 188 31.4
AT1G18660 Arabidopsis thaliana HOM05D000041 ORTHO05D006140 1.0e-10 72.0 200 31.0
MSTRG.23000 Avicennia marina HOM05D000041 ORTHO05D006140 1.0e-10 72.0 210 28.6
BolC8t51874H Brassica oleracea HOM05D000041 ORTHO05D006140 1.0e-10 72.0 200 31.0
CDE02G0410 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 1.0e-10 72.0 191 30.4
Dinv38747 Davidia involucrata HOM05D000041 ORTHO05D006140 1.0e-10 72.0 156 31.4
GSVIVG01007961001 Vitis vinifera HOM05D000041 ORTHO05D006140 1.0e-10 72.0 159 30.8
Duzib205G1692 Durio zibethinus HOM05D000041 ORTHO05D006140 1.8e-10 71.2 147 31.3
RcHm_v2.0_Chr7g0182141 Rosa chinensis HOM05D000041 ORTHO05D006140 1.8e-10 71.2 255 26.7
BcaC07g41312 Brassica carinata HOM05D000041 ORTHO05D006140 2.3e-10 70.9 200 31.0
Cc04_g14400 Coffea canephora HOM05D000041 ORTHO05D006140 2.3e-10 70.9 200 29.5
Prupe.5G198700 Prunus persica HOM05D000041 ORTHO05D006140 2.3e-10 70.9 201 29.4
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 3.9e-10 70.1 200 28.5
Manes.14G081900 Manihot esculenta HOM05D000041 ORTHO05D006140 3.9e-10 70.1 203 28.1
Mapoly0007s0251 Marchantia polymorpha HOM05D000041 ORTHO05D006140 3.9e-10 70.1 178 31.5
Ca_14694_v3 Cicer arietinum L. HOM05D000041 ORTHO05D006140 5.1e-10 69.7 200 30.5
CsaV3_1G002560 Cucumis sativus L. HOM05D000041 ORTHO05D006140 5.1e-10 69.7 137 33.6
TPR.G12274 Trifolium pratense HOM05D000041 ORTHO05D006140 5.1e-10 69.7 198 31.3
BcaB07g31886 Brassica carinata HOM05D000041 ORTHO05D006140 6.7e-10 69.3 200 30.5
Lalb_Chr08g0235431 Lupinus albus HOM05D000041 ORTHO05D006140 6.7e-10 69.3 200 28.5
Oeu052459.1 Olea europaea HOM05D000041 ORTHO05D006140 6.7e-10 69.3 200 28.0
Atru.chr9.344 Acer truncatum HOM05D000041 ORTHO05D006140 8.8e-10 68.9 178 29.2
Actinidia04865 Actinidia chinensis HOM05D000041 ORTHO05D006140 8.8e-10 68.9 200 28.5
MELO3C017192.2 Cucumis melo HOM05D000041 ORTHO05D006140 8.8e-10 68.9 137 33.6
DCAR_016582 Daucus carota HOM05D000041 ORTHO05D006140 8.8e-10 68.9 200 27.5
MD14G1205300 Malus domestica HOM05D000041 ORTHO05D006140 8.8e-10 68.9 196 29.1
Phvul.009G185000 Phaseolus vulgaris HOM05D000041 ORTHO05D006140 8.8e-10 68.9 192 30.7
PGR083G0939 Punica granatum HOM05D000041 ORTHO05D006140 8.8e-10 68.9 160 30.0
Rhsim08G0152000 Rhododendron simsii HOM05D000041 ORTHO05D006140 8.8e-10 68.9 200 29.5
Dinv10659 Davidia involucrata HOM05D000041 ORTHO05D006140 1.1e-09 68.6 145 29.0
Gorai.001G079100 Gossypium raimondii HOM05D000041 ORTHO05D006140 1.1e-09 68.6 255 26.3
Hma1.2p1_0060F.1_g033480 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 1.1e-09 68.6 149 30.2
Hma1.2p1_2933F.1_g330550 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 1.1e-09 68.6 149 30.2
Sed0001387 Sechium edule HOM05D000041 ORTHO05D006140 1.1e-09 68.6 137 32.8
Ah.02g113790 Amaranthus hybridus HOM05D000041 ORTHO05D006140 1.5e-09 68.2 189 29.6
Potri.012G068100 Populus trichocarpa HOM05D000041 ORTHO05D006140 1.5e-09 68.2 200 28.0
Sopen03g034700 Solanum pennellii HOM05D000041 ORTHO05D006140 1.5e-09 68.2 234 28.2
THA.LOC104813886 Tarenaya hassleriana HOM05D000041 ORTHO05D006140 1.5e-09 68.2 201 27.9
Gohir.A07G070500 Gossypium hirsutum HOM05D000041 ORTHO05D006140 2.0e-09 67.8 255 26.3
Lalb_Chr11g0071711 Lupinus albus HOM05D000041 ORTHO05D006140 2.6e-09 67.4 200 28.0
MCO08G101 Micromonas commoda HOM05D000041 ORTHO05D006140 2.6e-09 67.4 425 27.1
Solyc03g115720.3 Solanum lycopersicum HOM05D000041 ORTHO05D006140 2.6e-09 67.4 234 27.8
TWI81G0058 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 2.6e-09 67.4 171 29.8
CAN.G479.58 Capsicum annuum HOM05D000041 ORTHO05D006140 3.3e-09 67.0 201 27.9
ClCG06G016000 Citrullus lanatus HOM05D000041 ORTHO05D006140 3.3e-09 67.0 204 30.9
Nitab4.5_0002756g0120 Nicotiana tabacum HOM05D000041 ORTHO05D006140 3.3e-09 67.0 201 29.4
VMungo1309G2906 Vigna mungo HOM05D000041 ORTHO05D006140 3.3e-09 67.0 192 30.2
Glyma.04G165900 Glycine max HOM05D000041 ORTHO05D006140 4.4e-09 66.6 200 29.5
Gohir.D07G075000 Gossypium hirsutum HOM05D000041 ORTHO05D006140 4.4e-09 66.6 248 27.0
unitig_0.g773 Utricularia gibba HOM05D000041 ORTHO05D006140 4.4e-09 66.6 194 26.3
Psat5g199640 Pisum sativum HOM05D000041 ORTHO05D006140 5.7e-09 66.2 199 30.7
C08p32020 Brassica napus HOM05D000041 ORTHO05D006140 7.4e-09 65.9 134 32.1
Glyma.06G196600 Glycine max HOM05D000041 ORTHO05D006140 9.7e-09 65.5 200 29.0
Hund11349 Selenicereus undatus HOM05D000041 ORTHO05D006140 9.7e-09 65.5 200 29.5
CSS0043787 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 1.3e-08 65.1 200 27.0
TWI60G1324 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 1.3e-08 65.1 173 30.6
EL10Ac5g11065 Beta vulgaris HOM05D000041 ORTHO05D006140 1.7e-08 64.7 200 28.5
PSO017G0721 Papaver somniferum HOM05D000041 ORTHO05D006140 1.7e-08 64.7 198 28.3
TAR629G1015 Trochodendron aralioides HOM05D000041 ORTHO05D006140 1.7e-08 64.7 200 29.0
Nitab4.5_0001211g0200 Nicotiana tabacum HOM05D000041 ORTHO05D006140 2.2e-08 64.3 201 29.9
Lj1g0011184 Lotus japonicus HOM05D000041 ORTHO05D006140 2.8e-08 63.9 192 29.7
Medtr3g037230 Medicago truncatula HOM05D000041 ORTHO05D006140 2.8e-08 63.9 198 30.3
CSS0039287 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 3.7e-08 63.5 135 31.1
PSO478G5294 Papaver somniferum HOM05D000041 ORTHO05D000061 3.7e-08 63.5 198 28.3
Sc04g0002810 Simmondsia chinensis HOM05D000041 ORTHO05D006140 8.2e-08 62.4 191 29.8
BcaC07g39990 Brassica carinata HOM05D000041 ORTHO05D006140 1.4e-07 61.6 206 29.6
Prupe.4G066700 Prunus persica HOM05D000041 ORTHO05D006140 4.1e-07 60.1 132 32.6
Zm00001eb019650 Zea mays HOM05D004346 ORTHO05D005153 5.3e-07 59.7 85 40.0
Cfa026163 Carpinus fangiana HOM05D000041 ORTHO05D006140 9.1e-07 58.9 194 28.4
COL.COLO4_36953 Corchorus olitorius HOM05D000041 ORTHO05D006140 1.2e-06 58.5 192 28.6
Zm00001eb105790 Zea mays HOM05D004346 ORTHO05D005153 2.6e-06 57.4 172 31.4
Os03g0409100 Oryza sativa ssp. japonica HOM05D004346 ORTHO05D005153 3.5e-06 57.0 200 29.5
AagrBONN_evm.TU.Sc2ySwM_344.2038 Anthoceros agrestis HOM05D000041 ORTHO05D006140 4.5e-06 56.6 185 27.0
Nn4g23280 Nelumbo nucifera HOM05D000041 ORTHO05D006140 4.5e-06 56.6 134 30.6
Os07g0509700 Oryza sativa ssp. japonica HOM05D004346 ORTHO05D005153 4.5e-06 56.6 172 30.8
SEGI_19140 Sequoiadendron giganteum HOM05D004346 ORTHO05D005153 5.9e-06 56.2 118 34.7
Zm00001eb322430 Zea mays HOM05D004346 ORTHO05D005153 5.9e-06 56.2 172 31.4


User provided reference genes

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