Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003141 Prasinoderma coloniale HOM05D007200 ORTHO05D009030 4.5e-147 524.6 277 100.0
MCO07G015 Micromonas commoda HOM05D007200 ORTHO05D009030 1.0e-42 177.9 254 44.9
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 2.0e-41 173.7 251 45.0
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 4.4e-41 172.6 251 45.8
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 4.8e-40 169.1 245 44.9
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 4.8e-40 169.1 252 46.0
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.4e-39 167.5 232 47.8
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.2e-38 164.5 233 47.6
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 1.2e-38 164.5 276 44.6
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.2e-38 164.5 231 45.5
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 2.0e-38 163.7 231 45.5
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 2.6e-38 163.3 232 46.1
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 4.5e-38 162.5 251 43.0
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 5.9e-38 162.2 230 44.3
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 7.7e-38 161.8 231 44.6
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 2.9e-37 159.8 234 44.9
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 2.9e-37 159.8 234 44.9
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 5.0e-37 159.1 257 43.2
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 5.0e-37 159.1 257 43.2
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 1.1e-36 157.9 235 45.5
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 1.5e-36 157.5 229 42.8
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 1.5e-36 157.5 257 42.8
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 2.5e-36 156.8 271 42.1
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 3.2e-36 156.4 233 44.6
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 3.2e-36 156.4 229 42.8
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 4.2e-36 156.0 257 42.4
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 4.2e-36 156.0 230 43.5
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 4.2e-36 156.0 229 42.4
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 5.5e-36 155.6 233 44.6
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 5.5e-36 155.6 249 42.6
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 7.2e-36 155.2 257 42.4
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 7.2e-36 155.2 233 44.6
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 2.1e-35 153.7 251 41.8
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 4.7e-35 152.5 249 41.8
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 4.7e-35 152.5 231 45.0
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 8.0e-35 151.8 231 44.2
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 8.0e-35 151.8 236 45.3
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 8.0e-35 151.8 254 40.9
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 8.0e-35 151.8 257 42.0
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 1.8e-34 150.6 267 41.2
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 2.3e-34 150.2 230 43.9
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 2.3e-34 150.2 251 41.0
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 3.0e-34 149.8 230 44.3
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 8.8e-34 148.3 230 41.7
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 8.8e-34 148.3 233 43.3
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 1.2e-33 147.9 253 42.3
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 1.5e-33 147.5 246 41.9
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 2.0e-33 147.1 284 40.8
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 2.6e-33 146.7 255 40.0
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 2.6e-33 146.7 230 43.0
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 2.6e-33 146.7 234 41.9
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 2.6e-33 146.7 250 42.4
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 2.6e-33 146.7 235 43.0
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 3.3e-33 146.4 256 40.6
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 3.3e-33 146.4 255 41.6
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 3.3e-33 146.4 230 42.6
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 4.4e-33 146.0 259 39.8
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 4.4e-33 146.0 234 43.2
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 5.7e-33 145.6 255 39.2
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 9.7e-33 144.8 230 40.9
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 9.7e-33 144.8 255 39.2
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 9.7e-33 144.8 251 39.4
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 1.3e-32 144.4 250 43.6
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 2.2e-32 143.7 251 43.0
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 2.2e-32 143.7 252 40.1
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 2.2e-32 143.7 255 40.0
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 2.2e-32 143.7 250 41.6
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 2.2e-32 143.7 251 41.8
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 2.8e-32 143.3 230 41.7
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 3.7e-32 142.9 255 40.0
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 3.7e-32 142.9 251 41.4
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 6.3e-32 142.1 251 39.4
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 6.3e-32 142.1 256 39.1
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 6.3e-32 142.1 230 42.2
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 8.2e-32 141.7 252 39.7
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 8.2e-32 141.7 230 42.6
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 8.2e-32 141.7 231 42.9
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 1.4e-31 141.0 252 40.5
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 1.4e-31 141.0 253 38.7
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 2.4e-31 140.2 236 41.5
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 2.4e-31 140.2 251 40.6
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 2.4e-31 140.2 230 41.7
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 3.1e-31 139.8 254 40.9
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 5.3e-31 139.0 251 38.6
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 5.3e-31 139.0 239 40.6
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 5.3e-31 139.0 252 39.3
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 1.2e-30 137.9 234 40.6
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 1.6e-30 137.5 251 38.6
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 2.0e-30 137.1 247 40.5
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 2.0e-30 137.1 238 41.6
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 2.7e-30 136.7 250 39.6
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 5.9e-30 135.6 258 40.3
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 1.3e-29 134.4 206 44.2
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 2.2e-29 133.7 234 41.9
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 3.8e-29 132.9 235 41.3
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 4.7e-27 125.9 234 41.9
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 1.8e-26 124.0 255 37.3
Hund07085 Selenicereus undatus HOM05D007200 ORTHO05D009030 2.3e-26 123.6 136 52.2
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 3.0e-26 123.2 234 41.5
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 5.2e-26 122.5 254 35.0
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 1.5e-25 120.9 234 40.6
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 3.4e-25 119.8 137 50.4
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 2.2e-24 117.1 232 39.2
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 1.8e-23 114.0 193 43.0
Sc16g0008540 Simmondsia chinensis HOM05D007200 ORTHO05D009030 3.5e-22 109.8 148 47.3
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 1.0e-21 108.2 251 35.9
AUR62004827 Chenopodium quinoa HOM05D007200 ORTHO05D009030 5.5e-20 102.4 134 50.0
SGA_v2.0_scaffold95G28806 Striga asiatica HOM05D007200 ORTHO05D009030 9.5e-20 101.7 137 46.7
C05p61820 Brassica napus HOM05D000205 ORTHO05D000438 1.3e-08 64.7 78 50.0
Os01g0934350 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 1.8e-07 60.8 59 59.3
MD04G1202900 Malus domestica HOM05D007200 ORTHO05D009030 4.6e-06 56.2 78 52.6


User provided reference genes

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