Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 1.5e-133 479.6 254 100.0
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 6.4e-55 218.4 324 44.1
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 2.5e-27 126.7 164 48.2
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 9.6e-27 124.8 176 44.3
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 4.7e-26 122.5 170 45.9
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 6.2e-26 122.1 161 46.6
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 6.2e-26 122.1 161 46.0
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 6.2e-26 122.1 203 40.4
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.1e-25 121.3 161 46.0
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.1e-25 121.3 176 42.6
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.1e-25 121.3 176 42.6
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.4e-25 120.9 193 39.4
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 1.8e-25 120.6 150 46.7
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.8e-25 120.6 153 46.4
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 1.8e-25 120.6 150 49.3
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 2.4e-25 120.2 190 41.6
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 3.1e-25 119.8 174 43.7
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 3.1e-25 119.8 161 45.3
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 4.0e-25 119.4 174 42.5
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 4.0e-25 119.4 161 45.3
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 6.9e-25 118.6 153 46.4
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 6.9e-25 118.6 161 45.3
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 8.9e-25 118.2 153 45.8
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 8.9e-25 118.2 161 44.1
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 8.9e-25 118.2 153 46.4
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 8.9e-25 118.2 153 46.4
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.2e-24 117.9 153 45.8
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 1.2e-24 117.9 153 45.8
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 1.2e-24 117.9 171 42.1
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 1.5e-24 117.5 161 45.3
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.5e-24 117.5 126 54.0
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 2.0e-24 117.1 177 43.5
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 2.0e-24 117.1 204 38.2
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 2.0e-24 117.1 153 47.1
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 2.0e-24 117.1 170 42.4
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 2.6e-24 116.7 161 44.1
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 2.6e-24 116.7 161 44.1
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 3.4e-24 116.3 174 42.5
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 3.4e-24 116.3 174 42.5
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 3.4e-24 116.3 153 45.8
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 3.4e-24 116.3 161 43.5
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 3.4e-24 116.3 161 44.1
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 4.4e-24 115.9 161 44.1
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 4.4e-24 115.9 161 44.1
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 4.4e-24 115.9 161 44.1
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 4.4e-24 115.9 152 44.7
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 5.8e-24 115.5 172 42.4
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 5.8e-24 115.5 161 43.5
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 5.8e-24 115.5 161 44.1
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 5.8e-24 115.5 153 46.4
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 7.6e-24 115.2 153 45.1
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 7.6e-24 115.2 177 44.1
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 7.6e-24 115.2 172 43.0
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 7.6e-24 115.2 174 40.8
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 7.6e-24 115.2 178 41.0
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 9.9e-24 114.8 178 40.4
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 9.9e-24 114.8 153 44.4
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 9.9e-24 114.8 158 44.3
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 1.3e-23 114.4 186 39.8
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 1.3e-23 114.4 153 43.8
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 1.3e-23 114.4 153 43.8
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 1.3e-23 114.4 153 43.8
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 1.3e-23 114.4 161 42.9
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 1.7e-23 114.0 153 44.4
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 1.7e-23 114.0 153 44.4
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 1.7e-23 114.0 161 43.5
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 2.2e-23 113.6 153 46.4
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 2.2e-23 113.6 153 44.4
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 2.9e-23 113.2 161 42.9
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 2.9e-23 113.2 156 44.9
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 2.9e-23 113.2 160 41.9
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 3.8e-23 112.8 176 40.9
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 6.4e-23 112.1 171 40.4
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 6.4e-23 112.1 178 39.3
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 8.4e-23 111.7 175 40.6
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 8.4e-23 111.7 153 43.1
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 1.1e-22 111.3 171 40.4
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 1.4e-22 110.9 161 41.6
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 1.9e-22 110.5 161 44.1
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 2.4e-22 110.2 158 44.3
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 2.4e-22 110.2 161 41.6
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 2.4e-22 110.2 176 39.8
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 3.2e-22 109.8 153 43.1
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 3.2e-22 109.8 176 39.2
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 4.2e-22 109.4 180 40.0
Cre06.g282150 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 2.1e-21 107.1 154 46.1
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 2.1e-21 107.1 176 39.2
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.1e-21 107.1 142 46.5
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 6.0e-21 105.5 176 38.1
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 5.6e-19 99.0 166 40.4
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 9.6e-19 98.2 161 39.8
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 4.8e-18 95.9 195 35.4
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 4.8e-18 95.9 162 38.9
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 8.1e-18 95.1 195 34.9
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 5.3e-17 92.4 153 42.5
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 4.5e-16 89.4 147 42.2
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 2.9e-15 86.7 130 46.2
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.4e-14 84.3 161 34.8
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 2.4e-14 83.6 162 38.9
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 3.2e-14 83.2 242 30.6
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 1.2e-13 81.3 118 42.4
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 3.3e-11 73.2 143 38.5
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-08 64.7 132 39.4
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.5e-08 64.3 115 41.7
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 6.4e-07 58.9 49 57.1
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 4.2e-06 56.2 48 54.2


User provided reference genes

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