Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000725 Prasinoderma coloniale HOM05D005493 ORTHO05D007154 2.1e-152 542.7 361 100.0
FvH4_1g24140 Fragaria vesca HOM05D005493 ORTHO05D007154 1.5e-25 121.3 207 33.3
FAN19G1729 Fragaria x ananassa HOM05D005493 ORTHO05D007154 1.5e-25 121.3 207 33.3
Manes.13G088900 Manihot esculenta HOM05D005493 ORTHO05D007154 2.6e-25 120.6 197 35.0
FAN28G0158 Fragaria x ananassa HOM05D005493 ORTHO05D007154 3.3e-25 120.2 207 33.3
Cre06.g278500 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 7.5e-25 119.0 201 34.3
MCO13G503 Micromonas commoda HOM05D005493 ORTHO05D007154 7.5e-25 119.0 185 35.1
FAN23G1811 Fragaria x ananassa HOM05D005493 ORTHO05D007154 3.7e-24 116.7 199 33.2
Haze_07019 Corylus avellana HOM05D005493 ORTHO05D007154 4.8e-24 116.3 210 33.3
Mapoly0011s0174 Marchantia polymorpha HOM05D005493 ORTHO05D007154 4.8e-24 116.3 196 33.7
Rhsim13G0140700 Rhododendron simsii HOM05D005493 ORTHO05D007154 4.8e-24 116.3 197 34.5
Medtr2g027010 Medicago truncatula HOM05D005493 ORTHO05D007154 6.3e-24 115.9 196 35.2
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 8.2e-24 115.5 196 34.7
CiPaw.10G081900 Carya illinoinensis HOM05D005493 ORTHO05D007154 1.4e-23 114.8 210 33.8
THA.LOC104806738 Tarenaya hassleriana HOM05D005493 ORTHO05D007154 1.4e-23 114.8 196 34.2
Cfa000035 Carpinus fangiana HOM05D005493 ORTHO05D007154 2.4e-23 114.0 210 32.4
SMO358G0363 Selaginella moellendorffii HOM05D005493 ORTHO05D007154 3.1e-23 113.6 195 34.9
Eucgr.E03858 Eucalyptus grandis HOM05D005493 ORTHO05D007154 5.3e-23 112.8 197 34.0
RcHm_v2.0_Chr2g0120371 Rosa chinensis HOM05D005493 ORTHO05D007154 5.3e-23 112.8 207 32.4
Glyma.15G120100 Glycine max HOM05D005493 ORTHO05D007154 7.0e-23 112.5 196 34.2
MD10G1339200 Malus domestica HOM05D005493 ORTHO05D007154 9.1e-23 112.1 197 33.5
Psat1g172480 Pisum sativum HOM05D005493 ORTHO05D007154 9.1e-23 112.1 196 33.7
Phvul.006G138500 Phaseolus vulgaris HOM05D005493 ORTHO05D007154 1.6e-22 111.3 196 34.2
Duzib192G0504 Durio zibethinus HOM05D005493 ORTHO05D007154 2.0e-22 110.9 197 33.5
Thecc.06G236400 Theobroma cacao HOM05D005493 ORTHO05D007154 2.0e-22 110.9 196 33.2
CSS0047473 Camellia sinensis var. sinensis HOM05D005493 ORTHO05D007154 2.7e-22 110.5 196 34.2
Migut.M01444 Erythranthe guttata HOM05D005493 ORTHO05D007154 2.7e-22 110.5 196 33.7
ClCG01G010900 Citrullus lanatus HOM05D005493 ORTHO05D007154 3.5e-22 110.2 196 33.2
Ciclev10015889m.g Citrus clementina HOM05D005493 ORTHO05D007154 3.5e-22 110.2 207 32.4
Gohir.A05G175500 Gossypium hirsutum HOM05D005493 ORTHO05D007154 3.5e-22 110.2 197 33.0
Glyma.09G014500 Glycine max HOM05D005493 ORTHO05D007154 4.5e-22 109.8 196 33.2
Lj6g0009296 Lotus japonicus HOM05D005493 ORTHO05D007154 4.5e-22 109.8 196 33.2
SGA_v2.0_scaffold186G40127 Striga asiatica HOM05D005493 ORTHO05D007154 4.5e-22 109.8 210 34.8
MELO3C026067.2 Cucumis melo HOM05D005493 ORTHO05D007154 5.9e-22 109.4 198 33.8
Gohir.D05G178600 Gossypium hirsutum HOM05D005493 ORTHO05D007154 5.9e-22 109.4 197 32.5
Gorai.009G184000 Gossypium raimondii HOM05D005493 ORTHO05D007154 5.9e-22 109.4 197 32.5
HanXRQChr16g0515751 Helianthus annuus HOM05D005493 ORTHO05D007154 5.9e-22 109.4 196 31.6
Potri.006G004900 Populus trichocarpa HOM05D005493 ORTHO05D007154 5.9e-22 109.4 199 33.7
CsaV3_1G015560 Cucumis sativus L. HOM05D005493 ORTHO05D007154 7.7e-22 109.0 200 34.5
Dinv02850 Davidia involucrata HOM05D005493 ORTHO05D007154 7.7e-22 109.0 196 32.7
Thhalv10000943m.g Eutrema salsugineum HOM05D005493 ORTHO05D007154 7.7e-22 109.0 198 32.8
Prupe.4G003700 Prunus persica HOM05D005493 ORTHO05D007154 7.7e-22 109.0 196 32.7
Ah.11g043160 Amaranthus hybridus HOM05D005493 ORTHO05D007154 1.0e-21 108.6 196 32.7
Lsat_1_v5_gn_4_63901 Lactuca sativa HOM05D005493 ORTHO05D007154 1.0e-21 108.6 198 34.3
Zm00001eb253250 Zea mays HOM05D005493 ORTHO05D007154 1.0e-21 108.6 199 33.2
A06p44860 Brassica napus HOM05D005493 ORTHO05D007154 1.3e-21 108.2 198 32.8
TPR.G17550 Trifolium pratense HOM05D005493 ORTHO05D007154 1.3e-21 108.2 196 32.7
ATR0751G138 Amborella trichopoda HOM05D005493 ORTHO05D007154 1.7e-21 107.8 198 31.3
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea HOM05D005493 ORTHO05D007154 1.7e-21 107.8 211 33.2
C07p31340 Brassica napus HOM05D005493 ORTHO05D007154 1.7e-21 107.8 205 31.7
Sp2g12390 Schrenkiella parvula HOM05D005493 ORTHO05D007154 1.7e-21 107.8 198 32.3
Aqoxy1G04259 Aquilegia oxysepala HOM05D005493 ORTHO05D007154 2.2e-21 107.5 196 31.1
BcaB07g30764 Brassica carinata HOM05D005493 ORTHO05D007154 2.2e-21 107.5 198 32.3
CDE05G0023 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 2.2e-21 107.5 206 32.5
PGR042G0366 Punica granatum HOM05D005493 ORTHO05D007154 2.2e-21 107.5 196 32.7
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea HOM05D005493 ORTHO05D007154 2.9e-21 107.1 198 33.8
CDE05G0194 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 2.9e-21 107.1 196 32.7
VMungo0540G1721 Vigna mungo HOM05D005493 ORTHO05D007154 2.9e-21 107.1 196 33.2
Aa31sc219G70 Aethionema arabicum HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 31.8
AT5G47680 Arabidopsis thaliana HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 31.8
MSTRG.16053 Avicennia marina HOM05D005493 ORTHO05D007154 3.8e-21 106.7 196 32.7
A09p23180 Brassica napus HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 32.3
C09p29920 Brassica napus HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 32.3
BolC9t55855H Brassica oleracea HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 32.3
BraA06t27358Z Brassica rapa HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 32.3
BraA09t37921Z Brassica rapa HOM05D005493 ORTHO05D007154 3.8e-21 106.7 198 32.3
BcaC04g21607 Brassica carinata HOM05D005493 ORTHO05D007154 5.0e-21 106.3 198 32.3
Cc09_g00320 Coffea canephora HOM05D005493 ORTHO05D007154 5.0e-21 106.3 198 33.3
Potri.016G005500 Populus trichocarpa HOM05D005493 ORTHO05D007154 5.0e-21 106.3 197 33.0
MSTRG.7128 Avicennia marina HOM05D005493 ORTHO05D007154 6.5e-21 105.9 196 32.7
Pp3c1_33120 Physcomitrium patens HOM05D005493 ORTHO05D007154 6.5e-21 105.9 294 32.0
AL8G10270 Arabidopsis lyrata HOM05D005493 ORTHO05D007154 1.1e-20 105.1 198 31.8
Duzib160G0837 Durio zibethinus HOM05D005493 ORTHO05D007154 1.1e-20 105.1 197 32.0
SalBow8G5358 Salvia bowleyana HOM05D005493 ORTHO05D007154 1.1e-20 105.1 196 32.7
EL10Ac8g19414 Beta vulgaris HOM05D005493 ORTHO05D007154 1.5e-20 104.8 196 33.7
MBI14_g10146_MAGBIO Magnolia biondii HOM05D005493 ORTHO05D007154 1.9e-20 104.4 196 32.7
Hund29945 Selenicereus undatus HOM05D005493 ORTHO05D007154 1.9e-20 104.4 207 32.4
Actinidia39254 Actinidia chinensis HOM05D005493 ORTHO05D007154 2.5e-20 104.0 197 32.0
AUR62033011 Chenopodium quinoa HOM05D005493 ORTHO05D007154 2.5e-20 104.0 196 32.7
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla HOM05D005493 ORTHO05D007154 2.5e-20 104.0 288 28.1
BcaC06g31350 Brassica carinata HOM05D005493 ORTHO05D007154 3.2e-20 103.6 210 31.9
Carub.0008s0010 Capsella rubella HOM05D005493 ORTHO05D007154 3.2e-20 103.6 196 31.6
COL.COLO4_31918 Corchorus olitorius HOM05D005493 ORTHO05D007154 3.2e-20 103.6 196 32.1
TAR626G1878 Trochodendron aralioides HOM05D005493 ORTHO05D007154 3.2e-20 103.6 198 32.8
Atru.chr1.2258 Acer truncatum HOM05D005493 ORTHO05D007154 4.2e-20 103.2 197 32.0
Solyc11g012760.2 Solanum lycopersicum HOM05D005493 ORTHO05D007154 4.2e-20 103.2 197 32.0
QL05p067786 Quercus lobata HOM05D005493 ORTHO05D007154 5.5e-20 102.8 217 30.9
Sopen11g007500 Solanum pennellii HOM05D005493 ORTHO05D007154 5.5e-20 102.8 197 32.0
SGA_v2.0_scaffold7G03695 Striga asiatica HOM05D005493 ORTHO05D007154 5.5e-20 102.8 196 33.7
CARHR173630 Cardamine hirsuta HOM05D005493 ORTHO05D007154 7.2e-20 102.4 198 30.8
TWI38G1153 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 7.2e-20 102.4 210 30.0
Lalb_Chr18g0057311 Lupinus albus HOM05D005493 ORTHO05D007154 1.2e-19 101.7 201 29.9
Sed0001140 Sechium edule HOM05D005493 ORTHO05D007154 1.2e-19 101.7 294 33.3
Pp3c2_12110 Physcomitrium patens HOM05D005493 ORTHO05D007154 2.1e-19 100.9 209 31.1
SEGI_02626 Sequoiadendron giganteum HOM05D005493 ORTHO05D007154 2.1e-19 100.9 169 32.0
PGSC0003DMG400013365 Solanum tuberosum HOM05D005493 ORTHO05D007154 2.1e-19 100.9 197 32.0
Cpa.g.sc27.228 Carica papaya HOM05D005493 ORTHO05D007154 2.7e-19 100.5 197 32.0
Nitab4.5_0001296g0130 Nicotiana tabacum HOM05D005493 ORTHO05D007154 2.7e-19 100.5 206 31.1
Oeu025962.1 Olea europaea HOM05D005493 ORTHO05D007154 3.6e-19 100.1 214 30.4
PSO339G5884 Papaver somniferum HOM05D005493 ORTHO05D007154 3.6e-19 100.1 196 30.6
Peaxi162Scf00827g00517 Petunia axillaris HOM05D005493 ORTHO05D007154 4.7e-19 99.8 204 31.4
CANSAT56G4202 Cannabis sativa HOM05D005493 ORTHO05D007154 6.1e-19 99.4 197 32.0
TWI63G0139 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 6.1e-19 99.4 210 30.5
CAN.G1156.21 Capsicum annuum HOM05D005493 ORTHO05D007154 2.3e-18 97.4 197 31.5
DCAR_006316 Daucus carota HOM05D005493 ORTHO05D007154 3.0e-18 97.1 196 30.1
vmacro03608 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 4.0e-18 96.7 166 33.7
ECA232G3574 Erigeron canadensis HOM05D005493 ORTHO05D007154 5.2e-18 96.3 195 29.7
Lj1A1246T23 Lonicera japonica HOM05D005493 ORTHO05D007154 5.2e-18 96.3 199 30.2
Rhsim13G0140600 Rhododendron simsii HOM05D005493 ORTHO05D007154 2.0e-17 94.4 221 29.4
Cre02.g119350 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 5.7e-17 92.8 256 36.3
BolC7t43675H Brassica oleracea HOM05D005493 ORTHO05D007154 1.3e-16 91.7 161 32.3
Nn1g07522 Nelumbo nucifera HOM05D005493 ORTHO05D007154 2.2e-16 90.9 169 30.2
Ca_00763_v3 Cicer arietinum L. HOM05D005493 ORTHO05D007154 1.1e-15 88.6 154 32.5
Sabra06G0004100 Salix brachista HOM05D005493 ORTHO05D007154 1.8e-15 87.8 226 28.3
GSVIVG01002894001 Vitis vinifera HOM05D005493 ORTHO05D007154 2.4e-15 87.4 130 36.2
AUR62034063 Chenopodium quinoa HOM05D005493 ORTHO05D007154 5.4e-15 86.3 204 28.9
Dinv15338 Davidia involucrata HOM05D005493 ORTHO05D007154 1.2e-14 85.1 160 29.4
BcaC06g34232 Brassica carinata HOM05D005493 ORTHO05D007154 1.6e-14 84.7 205 26.8
Sc17g0007990 Simmondsia chinensis HOM05D005493 ORTHO05D007154 2.0e-14 84.3 158 32.9
HPP92_027483 Vanilla planifolia HOM05D005493 ORTHO05D007154 1.7e-13 81.3 156 31.4
Os02g0725600 Oryza sativa ssp. japonica HOM05D005493 ORTHO05D007154 5.0e-13 79.7 132 34.1
PRCOL_00003979 Prasinoderma coloniale HOM05D005493 ORTHO05D049008 5.0e-13 79.7 216 33.8
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 1.6e-11 74.7 144 29.9
Zm00001eb264500 Zea mays HOM05D005493 ORTHO05D007154 1.4e-10 71.6 100 36.0
Zm00001eb070580 Zea mays HOM05D005493 ORTHO05D007154 3.0e-10 70.5 98 35.7
Sabra16G0010400 Salix brachista HOM05D005493 ORTHO05D007154 1.7e-08 64.7 161 25.5
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-07 62.0 206 25.7
Cre10.g456851 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 5.4e-07 59.7 196 32.1
AagrBONN_evm.TU.Sc2ySwM_362.2751 Anthoceros agrestis HOM05D005493 ORTHO05D007154 1.6e-06 58.2 92 32.6


User provided reference genes

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