Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 4.4e-225 784.3 383 100.0
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.5e-148 529.3 379 66.5
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 5.1e-141 505.0 374 64.7
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 5.7e-140 501.5 374 64.4
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 9.7e-140 500.7 374 63.9
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 3.7e-139 498.8 373 63.5
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.4e-138 496.9 373 63.5
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.4e-138 496.9 374 63.9
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.8e-138 496.5 374 63.6
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 2.4e-138 496.1 374 63.4
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 4.1e-138 495.4 373 64.6
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 4.1e-138 495.4 373 63.5
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.2e-137 493.8 374 62.6
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.5e-137 493.4 374 62.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 2.0e-137 493.0 374 63.9
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.0e-137 493.0 373 63.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.6e-137 492.7 368 63.6
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.6e-137 492.7 374 63.6
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.4e-137 492.3 374 62.6
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 3.4e-137 492.3 374 64.2
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 3.4e-137 492.3 374 62.6
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 5.9e-137 491.5 374 62.0
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 5.9e-137 491.5 374 61.5
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.9e-137 491.5 374 62.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.9e-137 491.5 374 62.0
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 7.7e-137 491.1 374 63.6
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 7.7e-137 491.1 374 63.1
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 7.7e-137 491.1 374 62.3
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.0e-136 490.7 374 62.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.0e-136 490.7 374 61.8
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.0e-136 490.7 374 63.6
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.3e-136 490.3 374 62.0
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.3e-136 490.3 374 62.0
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 2.2e-136 489.6 374 61.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 2.2e-136 489.6 374 62.8
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 2.2e-136 489.6 374 63.1
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.9e-136 489.2 374 62.3
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.8e-136 488.8 376 61.7
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 5.0e-136 488.4 374 62.3
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 5.0e-136 488.4 374 63.1
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 5.0e-136 488.4 374 61.8
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 5.0e-136 488.4 374 62.0
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.0e-136 488.4 374 62.3
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 5.0e-136 488.4 374 63.1
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 6.5e-136 488.0 373 63.3
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 8.5e-136 487.6 374 62.8
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 8.5e-136 487.6 374 61.8
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.1e-135 487.3 374 61.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 1.1e-135 487.3 374 62.3
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.4e-135 486.9 374 62.3
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.4e-135 486.9 374 61.5
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.4e-135 486.9 375 63.2
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.9e-135 486.5 374 61.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.9e-135 486.5 373 62.2
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.9e-135 486.5 373 61.9
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 2.5e-135 486.1 374 62.0
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.2e-135 485.7 376 62.0
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.2e-135 485.7 376 61.2
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.2e-135 485.7 373 63.5
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 3.2e-135 485.7 377 62.1
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.2e-135 485.3 374 61.0
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 4.2e-135 485.3 374 61.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 4.2e-135 485.3 373 62.2
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.2e-135 485.3 373 63.3
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 7.2e-135 484.6 374 61.8
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.6e-134 483.4 374 61.5
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.1e-134 483.0 374 61.0
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 2.7e-134 482.6 374 62.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.7e-134 482.6 373 62.2
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 3.6e-134 482.3 374 61.8
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 6.1e-134 481.5 374 61.8
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.4e-133 480.3 374 61.8
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 3.9e-133 478.8 378 61.1
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.9e-133 478.8 374 62.6
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 6.7e-133 478.0 377 62.3
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.1e-132 477.2 381 60.6
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 4.3e-132 475.3 391 60.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 5.7e-132 474.9 378 60.6
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 7.4e-132 474.6 366 62.3
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 9.7e-132 474.2 384 58.9
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.7e-131 473.4 378 61.9
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 6.3e-131 471.5 401 58.6
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.4e-130 470.3 374 59.9
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.0e-129 466.5 376 59.3
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 7.7e-129 464.5 353 62.3
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 2.2e-128 463.0 396 57.1
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-127 460.3 373 59.5
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.9e-127 459.9 374 60.2
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 6.3e-123 444.9 392 55.9
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 7.0e-122 441.4 375 58.7
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 7.7e-121 438.0 401 54.6
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 2.2e-120 436.4 376 58.0
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 5.0e-120 435.3 374 57.8
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.8e-117 426.8 422 53.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.3e-115 420.6 374 56.7
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.7e-115 420.2 373 56.3
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 8.2e-115 417.9 310 64.5
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 7.7e-113 411.4 324 62.3
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.5e-111 407.1 379 55.4
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 4.0e-109 399.1 472 46.6
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.0e-108 396.7 405 51.6
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.1e-102 376.7 348 55.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 3.4e-100 369.4 331 55.9
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 7.8e-81 305.1 224 67.0
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.5e-79 300.1 224 65.2
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 2.6e-76 290.0 214 65.0
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.8e-61 240.7 374 38.5
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.0e-56 224.9 175 61.1
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 9.3e-42 175.3 144 54.9
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.0e-40 171.8 143 58.7
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 4.3e-39 166.4 179 48.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 2.1e-17 94.4 80 55.0
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 2.3e-16 90.9 84 54.8
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.5e-15 88.2 58 70.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 4.4e-07 60.1 48 60.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.7e-06 58.2 42 61.9
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.7e-06 57.0 48 54.2


User provided reference genes

Program Settings