Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 7.2e-89 330.5 160 100.0
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 8.3e-85 317.0 159 96.2
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 3.1e-84 315.1 159 95.0
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 8.0e-72 273.9 159 83.6
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 1.1e-68 263.5 159 81.1
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 9.2e-68 260.4 159 79.2
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 4.6e-43 178.3 149 61.1
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 3.6e-40 168.7 137 60.6
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 4.7e-40 168.3 133 59.4
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 8.1e-40 167.5 159 54.7
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 1.8e-39 166.4 134 58.2
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 4.0e-39 165.2 159 55.3
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 2.6e-38 162.5 139 54.0
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 1.4e-36 156.8 135 55.6
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.6e-35 153.3 159 52.2
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 3.5e-35 152.1 137 56.2
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 7.8e-35 151.0 140 55.0
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 1.7e-34 149.8 134 53.7
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.3e-34 149.4 160 51.2
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 3.0e-34 149.1 139 51.8
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 8.7e-34 147.5 138 54.3
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 9.6e-33 144.1 137 53.3
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 4.8e-32 141.7 165 49.7
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 8.1e-32 141.0 139 52.5
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.4e-31 140.2 151 51.0
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 4.0e-31 138.7 162 49.4
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 1.2e-30 137.1 142 51.4
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 1.3e-29 133.7 135 51.1
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 1.7e-29 133.3 143 47.6
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 1.7e-29 133.3 135 53.3
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 3.8e-29 132.1 136 52.2
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 3.2e-28 129.0 140 52.9
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 3.2e-28 129.0 140 50.0
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 5.4e-28 128.3 138 47.1
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 7.1e-28 127.9 142 47.2
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 9.3e-28 127.5 134 50.0
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 1.6e-27 126.7 140 45.7
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 1.6e-27 126.7 136 47.1
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.7e-27 125.9 135 48.1
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 3.5e-27 125.6 141 47.5
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 6.0e-27 124.8 143 47.6
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 7.9e-27 124.4 135 51.9
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 2.3e-26 122.9 141 47.5
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.3e-26 122.9 135 47.4
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 3.0e-26 122.5 98 63.3
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 3.0e-26 122.5 135 47.4
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 3.9e-26 122.1 133 45.1
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 8.7e-26 120.9 135 47.4
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.1e-25 120.6 138 46.4
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 1.5e-25 120.2 134 46.3
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 2.5e-25 119.4 141 46.1
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 3.3e-25 119.0 145 42.8
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 3.3e-25 119.0 151 45.0
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 4.3e-25 118.6 135 48.9
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 7.4e-25 117.9 141 44.7
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 1.3e-24 117.1 151 44.4
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.6e-24 116.7 151 44.4
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 2.1e-24 116.3 142 45.1
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 6.2e-24 114.8 144 41.7
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 2.4e-23 112.8 143 44.1
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 2.4e-23 112.8 137 44.5
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 3.1e-23 112.5 140 44.3
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 3.1e-23 112.5 134 43.3
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 6.9e-23 111.3 136 45.6
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.2e-22 110.5 133 44.4
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 4.5e-22 108.6 144 43.8
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 9.9e-22 107.5 129 45.0
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 9.9e-22 107.5 130 43.8
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 1.3e-21 107.1 133 45.1
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.3e-21 107.1 137 43.8
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 1.3e-21 107.1 140 44.3
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 2.2e-21 106.3 160 40.0
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 2.9e-21 105.9 133 42.9
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 2.9e-21 105.9 142 45.8
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 6.4e-21 104.8 139 43.2
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 1.9e-20 103.2 143 41.3
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 4.2e-20 102.1 130 42.3
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 4.2e-20 102.1 130 42.3
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 4.2e-20 102.1 144 42.4
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 7.1e-20 101.3 142 40.1
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 7.1e-20 101.3 139 44.6
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 2.7e-19 99.4 100 54.0
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 6.0e-19 98.2 144 41.0
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 1.0e-18 97.4 135 43.0
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 1.8e-18 96.7 157 38.2
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 3.0e-18 95.9 139 43.9
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 3.9e-18 95.5 141 41.1
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 5.1e-18 95.1 137 46.0
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 8.7e-18 94.4 157 36.9
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 1.5e-17 93.6 137 45.3
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 1.9e-17 93.2 101 50.5
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 1.9e-17 93.2 99 51.5
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 2.5e-17 92.8 136 45.6
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 2.5e-17 92.8 137 45.3
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 4.3e-17 92.0 146 40.4
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 1.6e-16 90.1 118 44.1
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 1.6e-16 90.1 144 39.6
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 2.8e-16 89.4 121 43.8
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 2.8e-16 89.4 138 40.6
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 4.8e-16 88.6 144 38.2
ATR0172G001 Amborella trichopoda HOM05D000237 ORTHO05D006530 6.2e-16 88.2 134 41.8
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 6.2e-16 88.2 118 43.2
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 1.8e-15 86.7 136 41.9
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 2.4e-15 86.3 118 44.1
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 1.2e-14 84.0 138 36.2
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 2.6e-14 82.8 128 35.9
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 2.5e-12 76.3 58 60.3
SEGI_02602 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 2.5e-12 76.3 157 32.5
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 3.2e-12 75.9 105 46.7
Oeu047175.1 Olea europaea HOM05D000237 ORTHO05D006530 1.3e-08 63.9 156 29.5
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 8.2e-08 61.2 55 54.5
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 9.0e-07 57.8 55 47.3
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 3.4e-06 55.8 45 55.6
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 5.9e-06 55.1 108 34.3


User provided reference genes

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