Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402025314 Solanum tuberosum HOM05D000966 ORTHO05D004359 1.2e-152 543.1 268 100.0
Solyc04g057880.3 Solanum lycopersicum HOM05D000966 ORTHO05D004359 9.1e-137 490.3 266 93.2
Sopen04g025730 Solanum pennellii HOM05D000966 ORTHO05D004359 2.8e-133 478.8 266 92.1
Nitab4.5_0003978g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 2.1e-101 372.9 269 73.6
Nitab4.5_0000317g0220 Nicotiana tabacum HOM05D000966 ORTHO05D004359 2.9e-98 362.5 269 72.5
Peaxi162Scf00066g00223 Petunia axillaris HOM05D000966 ORTHO05D004359 1.8e-84 316.6 268 66.8
Nitab4.5_0000418g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 4.9e-66 255.4 275 55.3
CAN.G531.16 Capsicum annuum HOM05D000966 ORTHO05D004359 8.7e-63 244.6 268 54.9
Peaxi162Scf00591g00715 Petunia axillaris HOM05D000966 ORTHO05D004359 4.1e-60 235.7 265 54.7
Sopen06g020060 Solanum pennellii HOM05D000966 ORTHO05D004359 6.9e-60 235.0 275 53.8
Nitab4.5_0005166g0010 Nicotiana tabacum HOM05D000966 ORTHO05D004359 2.0e-59 233.4 275 52.0
Solyc06g059960.4 Solanum lycopersicum HOM05D000966 ORTHO05D004359 2.9e-58 229.6 275 52.7
Oeu015303.1 Olea europaea HOM05D000966 ORTHO05D004359 6.1e-40 168.7 259 43.2
CSS0042459 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 3.9e-39 166.0 317 36.6
Actinidia21275 Actinidia chinensis HOM05D000966 ORTHO05D004359 3.3e-38 162.9 297 40.1
Dinv14693 Davidia involucrata HOM05D000966 ORTHO05D004359 8.2e-37 158.3 291 37.8
Ciclev10000005m.g Citrus clementina HOM05D000966 ORTHO05D004359 1.8e-36 157.1 290 38.6
Lj1g0026196 Lotus japonicus HOM05D000966 ORTHO05D004359 1.8e-36 157.1 214 43.9
CiPaw.15G031200 Carya illinoinensis HOM05D000966 ORTHO05D004359 9.1e-36 154.8 323 37.2
Actinidia15211 Actinidia chinensis HOM05D000966 ORTHO05D004359 4.5e-35 152.5 300 38.7
QL09p032370 Quercus lobata HOM05D000966 ORTHO05D004359 5.9e-35 152.1 282 37.2
SalBow2G0813 Salvia bowleyana HOM05D000966 ORTHO05D004359 5.9e-35 152.1 250 39.6
MSTRG.1411 Avicennia marina HOM05D000966 ORTHO05D004359 1.7e-34 150.6 216 41.7
TPR.G21850 Trifolium pratense HOM05D000966 ORTHO05D004359 1.7e-34 150.6 252 40.9
TAR381G1211 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.7e-34 150.6 325 36.9
Haze_17638 Corylus avellana HOM05D000966 ORTHO05D004359 2.9e-34 149.8 313 37.4
Atru.chr13.1574 Acer truncatum HOM05D000966 ORTHO05D004359 5.0e-34 149.1 266 39.1
Duzib041G0231 Durio zibethinus HOM05D000966 ORTHO05D004359 8.5e-34 148.3 278 37.8
TAR625G0972 Trochodendron aralioides HOM05D000966 ORTHO05D004359 2.5e-33 146.7 329 34.0
arahy.Tifrunner.gnm1.ann1.Z22D2G Arachis hypogaea HOM05D000966 ORTHO05D004359 4.2e-33 146.0 229 43.2
Ca_16610_v3 Cicer arietinum L. HOM05D000966 ORTHO05D004359 4.2e-33 146.0 228 42.1
Gohir.A02G070700 Gossypium hirsutum HOM05D000966 ORTHO05D004359 4.2e-33 146.0 279 38.7
arahy.Tifrunner.gnm1.ann1.P7B6WW Arachis hypogaea HOM05D000966 ORTHO05D004359 5.5e-33 145.6 229 42.8
Nn5g28439 Nelumbo nucifera HOM05D000966 ORTHO05D004359 9.4e-33 144.8 271 38.7
Cc10_g13740 Coffea canephora HOM05D000966 ORTHO05D004359 1.2e-32 144.4 269 40.5
MD08G1159600 Malus domestica HOM05D000966 ORTHO05D004359 2.1e-32 143.7 294 35.4
Medtr3g088625 Medicago truncatula HOM05D000966 ORTHO05D004359 2.7e-32 143.3 232 42.2
Phvul.009G130100 Phaseolus vulgaris HOM05D000966 ORTHO05D004359 2.7e-32 143.3 235 39.1
Glyma.06G117700 Glycine max HOM05D000966 ORTHO05D004359 3.6e-32 142.9 244 38.1
COL.COLO4_35487 Corchorus olitorius HOM05D000966 ORTHO05D004359 4.7e-32 142.5 222 41.4
COL.COLO4_36773 Corchorus olitorius HOM05D000966 ORTHO05D004359 6.1e-32 142.1 286 38.1
VMungo1309G2033 Vigna mungo HOM05D000966 ORTHO05D004359 8.0e-32 141.7 215 39.5
Cpa.g.sc26.315 Carica papaya HOM05D000966 ORTHO05D004359 1.0e-31 141.4 314 34.7
Cfa018425 Carpinus fangiana HOM05D000966 ORTHO05D004359 1.0e-31 141.4 313 35.1
GSVIVG01008805001 Vitis vinifera HOM05D000966 ORTHO05D004359 1.0e-31 141.4 273 40.3
CiPaw.16G022600 Carya illinoinensis HOM05D000966 ORTHO05D004359 1.8e-31 140.6 290 36.9
Duzib093G1496 Durio zibethinus HOM05D000966 ORTHO05D004359 1.8e-31 140.6 291 34.7
Glyma.04G245400 Glycine max HOM05D000966 ORTHO05D004359 4.0e-31 139.4 228 40.4
Thecc.08G133300 Theobroma cacao HOM05D000966 ORTHO05D004359 4.0e-31 139.4 299 36.5
Migut.N03259 Erythranthe guttata HOM05D000966 ORTHO05D004359 1.2e-30 137.9 256 37.9
Eucgr.F03851 Eucalyptus grandis HOM05D000966 ORTHO05D004359 1.2e-30 137.9 282 38.3
Potri.005G182100 Populus trichocarpa HOM05D000966 ORTHO05D004359 1.5e-30 137.5 264 35.2
Gorai.005G087500 Gossypium raimondii HOM05D000966 ORTHO05D004359 2.0e-30 137.1 278 37.8
Aa31LG4G7310 Aethionema arabicum HOM05D000966 ORTHO05D004359 2.6e-30 136.7 266 38.3
CANSAT25G2222 Cannabis sativa HOM05D000966 ORTHO05D004359 5.7e-30 135.6 313 35.8
SalBow7G0355 Salvia bowleyana HOM05D000966 ORTHO05D004359 5.7e-30 135.6 218 40.4
SalBow7G2771 Salvia bowleyana HOM05D000966 ORTHO05D004359 5.7e-30 135.6 218 40.4
TWI32G0333 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 7.5e-30 135.2 246 37.4
Gohir.D02G077900 Gossypium hirsutum HOM05D000966 ORTHO05D004359 9.7e-30 134.8 254 37.4
Manes.02G168600 Manihot esculenta HOM05D000966 ORTHO05D004359 9.7e-30 134.8 309 33.0
TWI34G1216 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 9.7e-30 134.8 247 36.0
Gohir.D05G240000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 2.2e-29 133.7 275 35.6
Gorai.009G248900 Gossypium raimondii HOM05D000966 ORTHO05D004359 2.2e-29 133.7 275 35.6
THA.LOC104812082 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 1.4e-28 131.0 222 41.9
MD15G1133700 Malus domestica HOM05D000966 ORTHO05D004359 5.3e-28 129.0 293 33.8
Oeu040396.1 Olea europaea HOM05D000966 ORTHO05D004359 5.3e-28 129.0 234 38.5
Oeu040397.2 Olea europaea HOM05D000966 ORTHO05D004359 5.3e-28 129.0 234 38.5
RcHm_v2.0_Chr6g0296741 Rosa chinensis HOM05D000966 ORTHO05D004359 9.1e-28 128.3 308 34.4
THA.LOC104810214 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 9.1e-28 128.3 270 37.0
Nn1g08953 Nelumbo nucifera HOM05D000966 ORTHO05D004359 1.2e-27 127.9 293 35.2
TWI60G1172 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 2.7e-27 126.7 247 35.6
Lalb_Chr23g0271181 Lupinus albus HOM05D000966 ORTHO05D004359 3.5e-27 126.3 239 38.1
DCAR_014368 Daucus carota HOM05D000966 ORTHO05D004359 5.9e-27 125.6 284 34.2
CARHR070780 Cardamine hirsuta HOM05D000966 ORTHO05D004359 7.7e-27 125.2 218 43.1
Sc26g0002860 Simmondsia chinensis HOM05D000966 ORTHO05D004359 7.7e-27 125.2 287 33.4
CANSAT56G0447 Cannabis sativa HOM05D000966 ORTHO05D004359 1.0e-26 124.8 216 39.4
Sabra05G0138100 Salix brachista HOM05D000966 ORTHO05D004359 1.7e-26 124.0 309 33.0
FAN20G2668 Fragaria x ananassa HOM05D000966 ORTHO05D004359 2.9e-26 123.2 311 33.1
Thhalv10017998m.g Eutrema salsugineum HOM05D000966 ORTHO05D004359 3.8e-26 122.9 268 38.1
Hund26773 Selenicereus undatus HOM05D000966 ORTHO05D004359 3.8e-26 122.9 272 31.2
Sp5g32470 Schrenkiella parvula HOM05D000966 ORTHO05D004359 6.5e-26 122.1 225 40.9
Lalb_Chr11g0066181 Lupinus albus HOM05D000966 ORTHO05D004359 8.5e-26 121.7 250 35.6
Aqoxy5G02416 Aquilegia oxysepala HOM05D000966 ORTHO05D004359 1.1e-25 121.3 316 29.4
CANSAT64G2451 Cannabis sativa HOM05D000966 ORTHO05D004359 1.5e-25 120.9 215 39.5
Potri.002G079100 Populus trichocarpa HOM05D000966 ORTHO05D004359 1.5e-25 120.9 266 34.2
FvH4_2g27880 Fragaria vesca HOM05D000966 ORTHO05D004359 1.9e-25 120.6 311 32.8
FAN15G1688 Fragaria x ananassa HOM05D000966 ORTHO05D004359 5.5e-25 119.0 311 31.5
FAN24G3136 Fragaria x ananassa HOM05D000966 ORTHO05D004359 5.5e-25 119.0 314 32.2
Carub.0002s2418 Capsella rubella HOM05D000966 ORTHO05D004359 1.6e-24 117.5 221 38.0
Lalb_Chr08g0241051 Lupinus albus HOM05D000966 ORTHO05D004359 1.6e-24 117.5 277 31.4
AT1G77300 Arabidopsis thaliana HOM05D000966 ORTHO05D004359 6.1e-24 115.5 219 40.2
MBI03_g13487_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D004359 6.1e-24 115.5 322 32.0
PSO170G5191 Papaver somniferum HOM05D000966 ORTHO05D004359 1.0e-23 114.8 258 34.9
EL10Ac1g01359 Beta vulgaris HOM05D000966 ORTHO05D004359 1.4e-23 114.4 264 36.4
FAN27G3367 Fragaria x ananassa HOM05D000966 ORTHO05D004359 1.8e-23 114.0 321 31.8
PSO017G4997 Papaver somniferum HOM05D000966 ORTHO05D004359 3.0e-23 113.2 262 35.5
MELO3C008475.2 Cucumis melo HOM05D000966 ORTHO05D004359 6.8e-23 112.1 270 33.0
Manes.18G082550 Manihot esculenta HOM05D000966 ORTHO05D004359 6.8e-23 112.1 277 34.3
AL2G37500 Arabidopsis lyrata HOM05D000966 ORTHO05D004359 8.8e-23 111.7 227 38.8
CsaV3_6G034050 Cucumis sativus L. HOM05D000966 ORTHO05D004359 3.4e-22 109.8 273 31.9
SGA_v2.0_scaffold28G11969 Striga asiatica HOM05D000966 ORTHO05D004359 1.7e-21 107.5 227 35.7
BcaB05g25036 Brassica carinata HOM05D000966 ORTHO05D004359 2.2e-21 107.1 217 39.2
Sed0004584 Sechium edule HOM05D000966 ORTHO05D004359 2.8e-21 106.7 322 33.2
A07p42840 Brassica napus HOM05D000966 ORTHO05D004359 3.7e-21 106.3 219 38.4
BraA07t31805Z Brassica rapa HOM05D000966 ORTHO05D004359 3.7e-21 106.3 219 38.4
Hma1.2p1_0880F.1_g231810 Hydrangea macrophylla HOM05D000966 ORTHO05D004359 6.3e-21 105.5 301 31.9
PGR042G2231 Punica granatum HOM05D000966 ORTHO05D004359 6.3e-21 105.5 245 36.7
Lsat_1_v5_gn_6_110300 Lactuca sativa HOM05D000966 ORTHO05D004359 8.3e-21 105.1 231 34.6
ClCG08G006030 Citrullus lanatus HOM05D000966 ORTHO05D004359 1.4e-20 104.4 269 32.3
ECA246G3937 Erigeron canadensis HOM05D000966 ORTHO05D004359 1.8e-20 104.0 252 31.0
AUR62007714 Chenopodium quinoa HOM05D000966 ORTHO05D004359 2.4e-20 103.6 256 34.8
C06p51460 Brassica napus HOM05D000966 ORTHO05D004359 3.1e-20 103.2 219 37.9
BolC6t40164H Brassica oleracea HOM05D000966 ORTHO05D004359 7.0e-20 102.1 219 37.4
AUR62013429 Chenopodium quinoa HOM05D000966 ORTHO05D004359 9.1e-20 101.7 246 33.7
Sed0009206 Sechium edule HOM05D000966 ORTHO05D004359 9.1e-20 101.7 272 32.0
HanXRQChr05g0149781 Helianthus annuus HOM05D000966 ORTHO05D004359 1.7e-18 97.4 241 32.4
SHI09224 Sapria himalayana HOM05D000966 ORTHO05D004359 1.7e-18 97.4 220 32.3
DCAR_016659 Daucus carota HOM05D000966 ORTHO05D004359 3.8e-18 96.3 120 45.8
CDE08G1614 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 3.3e-17 93.2 284 31.7
Gohir.A05G238000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 4.2e-17 92.8 257 35.0
THA.LOC104809635 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 5.5e-17 92.4 259 30.5
CDE06G2822 Ceratophyllum demersum HOM05D000625 ORTHO05D004359 1.0e-15 88.2 286 30.4
HPP92_016112 Vanilla planifolia HOM05D000966 ORTHO05D004359 1.8e-15 87.4 295 29.2
CDE02G1847 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 2.3e-15 87.0 270 34.8
CANSAT80G2061 Cannabis sativa HOM05D000966 ORTHO05D004359 1.2e-14 84.7 264 35.6
CSS0037288 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 1.8e-12 77.4 133 37.6
Ah.05g169110 Amaranthus hybridus HOM05D000966 ORTHO05D004359 2.0e-11 73.9 288 29.2
SGA_v2.0_scaffold25G11140 Striga asiatica HOM05D000966 ORTHO05D004359 5.9e-11 72.4 240 26.7
BcaC08g47620 Brassica carinata HOM05D000966 ORTHO05D004359 1.0e-10 71.6 219 32.0
Actinidia33296 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.5e-09 67.8 97 42.3
unitig_747.g21498 Utricularia gibba HOM05D000966 ORTHO05D004359 1.5e-09 67.8 117 35.9
Psat1g148000 Pisum sativum HOM05D005005 ORTHO05D004359 7.3e-09 65.5 128 37.5
unitig_0.g2115 Utricularia gibba HOM05D000966 ORTHO05D004359 2.3e-07 60.5 144 34.7
Lj7P351T22 Lonicera japonica HOM05D000966 ORTHO05D004359 4.0e-07 59.7 150 36.0
ATR0584G046 Amborella trichopoda HOM05D000966 ORTHO05D004359 4.4e-06 56.2 223 25.6


User provided reference genes

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