Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402021060 Solanum tuberosum HOM05D000007 ORTHO05D019314 4.2e-89 331.3 160 100.0
Nitab4.5_0008359g0010 Nicotiana tabacum HOM05D000007 ORTHO05D019314 2.3e-58 229.2 157 73.2
Peaxi162Scf00231g00121 Petunia axillaris HOM05D000007 ORTHO05D000017 8.1e-56 220.7 150 68.0
Peaxi162Scf00231g00246 Petunia axillaris HOM05D000007 ORTHO05D000017 1.7e-50 203.0 148 66.2
Nitab4.5_0002184g0020 Nicotiana tabacum HOM05D000007 ORTHO05D019314 8.9e-47 190.7 159 58.5
Sopen07g012590 Solanum pennellii HOM05D000007 ORTHO05D019314 1.3e-45 186.8 101 85.1
Peaxi162Scf00009g02530 Petunia axillaris HOM05D000007 ORTHO05D000017 1.4e-39 166.8 161 53.4
Peaxi162Scf00009g02613 Petunia axillaris HOM05D000007 ORTHO05D000017 6.9e-39 164.5 149 55.7
Nitab4.5_0000097g0140 Nicotiana tabacum HOM05D000007 ORTHO05D019314 7.6e-38 161.0 116 69.8
Nitab4.5_0000271g0050 Nicotiana tabacum HOM05D000007 ORTHO05D019314 1.7e-34 149.8 133 57.1
Peaxi162Scf00231g00123 Petunia axillaris HOM05D000007 ORTHO05D019314 1.6e-27 126.7 89 61.8
Peaxi162Scf00231g00013 Petunia axillaris HOM05D000007 ORTHO05D000017 5.5e-12 75.1 110 36.4
Cc06_g09830 Coffea canephora HOM05D000007 ORTHO05D000017 9.3e-12 74.3 121 38.0
Nitab4.5_0013904g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.3e-12 74.3 102 40.2
Sopen01g004180 Solanum pennellii HOM05D000007 ORTHO05D000017 9.3e-12 74.3 135 34.8
Cc00_g01300 Coffea canephora HOM05D000007 ORTHO05D000017 2.1e-11 73.2 148 34.5
COL.COLO4_07578 Corchorus olitorius HOM05D000007 ORTHO05D000017 2.7e-11 72.8 121 36.4
PGSC0003DMG400017998 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.7e-11 72.8 135 34.1
Rhsim11G0019900 Rhododendron simsii HOM05D000007 ORTHO05D000017 3.5e-11 72.4 111 39.6
CAN.G64.26 Capsicum annuum HOM05D000007 ORTHO05D000017 6.1e-11 71.6 146 31.5
Nitab4.5_0002905g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.1e-11 71.6 69 47.8
Peaxi162Scf00231g00028 Petunia axillaris HOM05D000007 ORTHO05D000017 1.8e-10 70.1 141 39.0
CAN.G229.18 Capsicum annuum HOM05D000007 ORTHO05D000017 2.3e-10 69.7 107 36.4
Gohir.D06G160400 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.3e-10 69.7 145 31.7
vmacro00299 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.0e-10 69.3 111 36.0
Gorai.010G187100 Gossypium raimondii HOM05D000007 ORTHO05D000017 5.1e-10 68.6 142 31.7
Gohir.A06G153600 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.7e-10 68.2 142 32.4
Peaxi162Scf00597g00412 Petunia axillaris HOM05D000007 ORTHO05D000017 8.7e-10 67.8 123 36.6
CAN.G1597.2 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-09 67.4 136 32.4
Dinv11914 Davidia involucrata HOM05D000007 ORTHO05D000017 1.1e-09 67.4 105 41.9
Peaxi162Scf00597g00511 Petunia axillaris HOM05D000007 ORTHO05D000017 1.5e-09 67.0 110 34.5
CiPaw.10G078600 Carya illinoinensis HOM05D000007 ORTHO05D000017 2.5e-09 66.2 123 37.4
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.5e-09 66.2 121 36.4
Oeu009401.1 Olea europaea HOM05D000007 ORTHO05D000017 2.5e-09 66.2 132 31.1
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 2.5e-09 66.2 122 31.1
Peaxi162Scf00597g00053 Petunia axillaris HOM05D000007 ORTHO05D000017 3.3e-09 65.9 110 36.4
Thecc.06G234400 Theobroma cacao HOM05D000007 ORTHO05D000017 3.3e-09 65.9 119 35.3
vmacro03637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.3e-09 65.5 121 34.7
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 5.7e-09 65.1 124 35.5
DCAR_019954 Daucus carota HOM05D000007 ORTHO05D000017 5.7e-09 65.1 112 37.5
vmacro03638 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 5.7e-09 65.1 116 31.9
Cpa.g.sc75.108 Carica papaya HOM05D000007 ORTHO05D000017 7.4e-09 64.7 122 32.8
Gohir.D08G025855 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.4e-09 64.7 134 32.1
Gorai.004G021800 Gossypium raimondii HOM05D000007 ORTHO05D000017 7.4e-09 64.7 133 33.8
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 9.7e-09 64.3 150 31.3
Lj2P695T9 Lonicera japonica HOM05D000007 ORTHO05D000017 9.7e-09 64.3 119 33.6
Dinv11913 Davidia involucrata HOM05D000007 ORTHO05D000017 1.3e-08 63.9 110 39.1
Lj2A693T16 Lonicera japonica HOM05D000007 ORTHO05D000017 1.3e-08 63.9 117 35.9
Nitab4.5_0001433g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-08 63.9 68 44.1
Peaxi162Scf00597g00417 Petunia axillaris HOM05D000007 ORTHO05D000017 1.3e-08 63.9 118 32.2
Duzib192G0105 Durio zibethinus HOM05D000007 ORTHO05D000017 2.2e-08 63.2 150 33.3
Peaxi162Scf00231g00027 Petunia axillaris HOM05D000007 ORTHO05D000017 2.2e-08 63.2 106 33.0
Dinv30807 Davidia involucrata HOM05D000007 ORTHO05D000017 2.8e-08 62.8 115 36.5
CAN.G930.5 Capsicum annuum HOM05D000007 ORTHO05D000001 3.7e-08 62.4 97 32.0
CiPaw.09G103200 Carya illinoinensis HOM05D000007 ORTHO05D000017 3.7e-08 62.4 116 33.6
Dinv32031 Davidia involucrata HOM05D000007 ORTHO05D000017 4.8e-08 62.0 121 33.9
Gohir.A08G015200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.8e-08 62.0 133 34.6
Nitab4.5_0002171g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.8e-08 62.0 90 37.8
Prupe.1G024500 Prunus persica HOM05D000007 ORTHO05D000017 4.8e-08 62.0 119 31.9
Gohir.A08G015148 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.3e-08 61.6 133 35.3
Peaxi162Scf00231g00224 Petunia axillaris HOM05D000007 ORTHO05D000017 6.3e-08 61.6 132 33.3
Rhsim05G0180800 Rhododendron simsii HOM05D000007 ORTHO05D000017 6.3e-08 61.6 147 32.7
Manes.09G077457 Manihot esculenta HOM05D000007 ORTHO05D000017 8.2e-08 61.2 113 31.0
Prupe.4G009600 Prunus persica HOM05D000007 ORTHO05D000017 8.2e-08 61.2 142 31.7
QL05p069384 Quercus lobata HOM05D000007 ORTHO05D000017 8.2e-08 61.2 138 33.3
Rhsim01G0117500 Rhododendron simsii HOM05D000007 ORTHO05D000017 8.2e-08 61.2 93 35.5
COL.COLO4_31897 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.1e-07 60.8 143 32.2
Lj2P689T8 Lonicera japonica HOM05D000007 ORTHO05D000017 1.1e-07 60.8 105 35.2
Manes.09G077400 Manihot esculenta HOM05D000007 ORTHO05D000017 1.1e-07 60.8 135 30.4
AT4G12560 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 1.4e-07 60.5 82 37.8
DCAR_004303 Daucus carota HOM05D000007 ORTHO05D000017 1.4e-07 60.5 153 27.5
Solyc09g083230.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.8e-07 60.1 90 36.7
Sopen09g032150 Solanum pennellii HOM05D000007 ORTHO05D000017 1.8e-07 60.1 90 36.7
Sopen09g032160 Solanum pennellii HOM05D000007 ORTHO05D000017 1.8e-07 60.1 90 36.7
DCAR_019955 Daucus carota HOM05D000007 ORTHO05D000017 2.4e-07 59.7 90 36.7
RhsimUnG0110700 Rhododendron simsii HOM05D000007 ORTHO05D000017 2.4e-07 59.7 98 33.7
TPR.G36982 Trifolium pratense HOM05D000007 ORTHO05D000017 2.4e-07 59.7 123 30.9
AUR62039094 Chenopodium quinoa HOM05D000007 ORTHO05D000017 3.1e-07 59.3 133 27.8
Potri.010G154700 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.1e-07 59.3 134 30.6
Potri.016G012500 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.1e-07 59.3 134 30.6
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 4.1e-07 58.9 98 35.7
Haze_06950 Corylus avellana HOM05D000007 ORTHO05D000017 4.1e-07 58.9 117 28.2
Gohir.D08G025844 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.1e-07 58.9 133 33.1
Gorai.004G021600 Gossypium raimondii HOM05D000007 ORTHO05D000017 4.1e-07 58.9 134 32.1
Gorai.004G021700 Gossypium raimondii HOM05D000007 ORTHO05D000017 4.1e-07 58.9 133 33.1
MD05G1358500 Malus domestica HOM05D000007 ORTHO05D000017 4.1e-07 58.9 142 31.7
Manes.01G149800 Manihot esculenta HOM05D000007 ORTHO05D000017 4.1e-07 58.9 91 36.3
Peaxi162Scf00009g02614 Petunia axillaris HOM05D000007 ORTHO05D019314 4.1e-07 58.9 45 64.4
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.3e-07 58.5 132 33.3
CSS0050410 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.3e-07 58.5 132 33.3
DCAR_019956 Daucus carota HOM05D000007 ORTHO05D000017 5.3e-07 58.5 122 34.4
Gorai.004G021400 Gossypium raimondii HOM05D000007 ORTHO05D000017 5.3e-07 58.5 128 35.2
Lj2C694T8 Lonicera japonica HOM05D000007 ORTHO05D000017 5.3e-07 58.5 123 30.1
Nitab4.5_0007614g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.3e-07 58.5 70 40.0
CANSAT56G1116 Cannabis sativa HOM05D000007 ORTHO05D000017 6.9e-07 58.2 128 33.6
Gohir.A08G015350 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.9e-07 58.2 105 33.3
Gohir.D08G025800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.9e-07 58.2 125 36.0
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 6.9e-07 58.2 147 28.6
MSTRG.7163 Avicennia marina HOM05D000007 ORTHO05D000017 9.0e-07 57.8 69 37.7
AUR62039091 Chenopodium quinoa HOM05D000007 ORTHO05D000017 9.0e-07 57.8 95 31.6
Cc09_g00810 Coffea canephora HOM05D000007 ORTHO05D000017 9.0e-07 57.8 113 30.1
Gorai.004G021100 Gossypium raimondii HOM05D000007 ORTHO05D000017 9.0e-07 57.8 133 32.3
Sabra06G0009400 Salix brachista HOM05D000007 ORTHO05D000017 9.0e-07 57.8 125 29.6
SGA_v2.0_scaffold7G03763 Striga asiatica HOM05D000007 ORTHO05D000017 9.0e-07 57.8 74 40.5
Hma1.2p1_0657F.1_g197070 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 1.2e-06 57.4 122 33.6
Nitab4.5_0002978g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-06 57.4 90 34.4
CARHR253610 Cardamine hirsuta HOM05D000007 ORTHO05D000017 1.5e-06 57.0 66 39.4
AUR62010297 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.5e-06 57.0 149 27.5
AUR62014755 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.5e-06 57.0 126 32.5
Duzib168G0318 Durio zibethinus HOM05D000007 ORTHO05D000017 1.5e-06 57.0 118 32.2
Migut.M01404 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.5e-06 57.0 64 43.8
Thhalv10028697m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 1.5e-06 57.0 58 43.1
Gohir.A08G015132 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.5e-06 57.0 122 34.4
Gorai.004G021300 Gossypium raimondii HOM05D000007 ORTHO05D000017 1.5e-06 57.0 124 34.7
Nitab4.5_0000122g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-06 57.0 68 38.2
Atru.chr1.2429 Acer truncatum HOM05D000007 ORTHO05D000017 2.0e-06 56.6 122 32.8
Oeu009398.1 Olea europaea HOM05D000007 ORTHO05D000017 2.0e-06 56.6 118 32.2
Sc05g0008370 Simmondsia chinensis HOM05D000007 ORTHO05D000017 2.0e-06 56.6 114 29.8
CANSAT56G3489 Cannabis sativa HOM05D000007 ORTHO05D000017 2.6e-06 56.2 143 32.2
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 2.6e-06 56.2 105 30.5
Aa31LG9G10090 Aethionema arabicum HOM05D000007 ORTHO05D000017 3.4e-06 55.8 57 40.4
Carub.0006s3183 Capsella rubella HOM05D000007 ORTHO05D000017 3.4e-06 55.8 83 37.3
Glyma.15G115100 Glycine max HOM05D000007 ORTHO05D000017 3.4e-06 55.8 95 32.6
Gohir.A08G015180 Gossypium hirsutum HOM05D000007 ORTHO05D000017 3.4e-06 55.8 130 32.3
PSO421G0673 Papaver somniferum HOM05D000007 ORTHO05D000017 3.4e-06 55.8 132 27.3
TWI38G0976 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 3.4e-06 55.8 103 32.0
Actinidia09174 Actinidia chinensis HOM05D000007 ORTHO05D000017 4.5e-06 55.5 62 45.2
AL6G47500 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 4.5e-06 55.5 83 36.1
Cfa000091 Carpinus fangiana HOM05D000007 ORTHO05D000017 4.5e-06 55.5 114 27.2
HanXRQChr10g0294791 Helianthus annuus HOM05D000007 ORTHO05D000017 4.5e-06 55.5 116 34.5
Lj2P693T12 Lonicera japonica HOM05D000007 ORTHO05D000017 4.5e-06 55.5 109 32.1
Sp6g04950 Schrenkiella parvula HOM05D000007 ORTHO05D000017 4.5e-06 55.5 57 42.1
CSS0002420 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.9e-06 55.1 67 34.3
CSS0024527 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.9e-06 55.1 67 34.3
CANSAT56G0084 Cannabis sativa HOM05D000007 ORTHO05D000017 5.9e-06 55.1 133 30.8
AUR62039090 Chenopodium quinoa HOM05D000007 ORTHO05D000017 5.9e-06 55.1 99 32.3
DCAR_020301 Daucus carota HOM05D000007 ORTHO05D000017 5.9e-06 55.1 128 35.9
Duzib160G0463 Durio zibethinus HOM05D000007 ORTHO05D000017 5.9e-06 55.1 127 30.7
Lj2C692T0 Lonicera japonica HOM05D000007 ORTHO05D000017 5.9e-06 55.1 91 33.0
Potri.006G013000 Populus trichocarpa HOM05D000007 ORTHO05D000017 5.9e-06 55.1 131 31.3
AUR62012552 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.7e-06 54.7 108 30.6
DCAR_004307 Daucus carota HOM05D000007 ORTHO05D000017 7.7e-06 54.7 137 29.9
DCAR_009419 Daucus carota HOM05D000007 ORTHO05D000017 7.7e-06 54.7 127 28.3
Gorai.004G022100 Gossypium raimondii HOM05D000007 ORTHO05D000017 7.7e-06 54.7 137 29.9
Lj6g0017026 Lotus japonicus HOM05D000007 ORTHO05D000017 7.7e-06 54.7 67 40.3
TWI34G0359 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 7.7e-06 54.7 106 29.2
EL10As6g23672 Beta vulgaris HOM05D000007 ORTHO05D000017 1.0e-05 54.3 98 33.7
BcaC01g00777 Brassica carinata HOM05D000007 ORTHO05D000017 1.0e-05 54.3 65 38.5
A08p15730 Brassica napus HOM05D000007 ORTHO05D000017 1.0e-05 54.3 65 38.5
C03p84160 Brassica napus HOM05D000007 ORTHO05D000017 1.0e-05 54.3 65 38.5
BolC3t20695H Brassica oleracea HOM05D000007 ORTHO05D000017 1.0e-05 54.3 65 38.5
BraA08t33552Z Brassica rapa HOM05D000007 ORTHO05D000017 1.0e-05 54.3 65 38.5
CANSAT56G1440 Cannabis sativa HOM05D000007 ORTHO05D000017 1.0e-05 54.3 136 28.7
AUR62014756 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.0e-05 54.3 97 32.0
AUR62016933 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.0e-05 54.3 95 32.6
Gohir.D06G160200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.0e-05 54.3 122 32.8
Peaxi162Scf00231g00249 Petunia axillaris HOM05D000007 ORTHO05D000017 1.0e-05 54.3 130 27.7
Potri.006G010800 Populus trichocarpa HOM05D000007 ORTHO05D000017 1.0e-05 54.3 108 32.4
SalBow8G4267 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.0e-05 54.3 132 29.5
Sc05g0008340 Simmondsia chinensis HOM05D000007 ORTHO05D000017 1.0e-05 54.3 94 36.2
PGSC0003DMG400031292 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-05 54.3 88 35.2
THA.LOC104806333 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.0e-05 54.3 58 41.4
THA.LOC104813618 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.0e-05 54.3 58 39.7


User provided reference genes

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