Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.0e-72 276.6 134 100.0
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.0e-35 151.4 91 71.4
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.8e-32 142.9 91 60.4
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 4.9e-30 134.8 91 59.3
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-25 120.2 74 64.9
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-23 113.6 91 47.3
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.4e-21 104.8 90 47.8
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.2e-21 104.0 89 46.1
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.2e-21 104.0 89 46.1
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.1e-20 102.8 90 46.7
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.6e-20 101.7 70 61.4
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.0e-20 101.3 79 49.4
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 1.0e-19 100.5 118 42.4
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 3.9e-19 98.6 90 44.4
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-18 97.1 85 51.8
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.5e-18 95.9 87 44.8
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.3e-18 95.5 82 47.6
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.8e-17 92.4 87 44.8
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.7e-17 91.7 86 41.9
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 8.1e-17 90.9 87 40.2
Solyc05g017910.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 3.1e-16 89.0 57 59.6
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.1e-16 89.0 78 48.7
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.2e-16 88.2 88 38.6
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 8.9e-16 87.4 64 53.1
Sopen10g005760 Solanum pennellii HOM05D008877 ORTHO05D006370 1.5e-15 86.7 76 47.4
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 7.6e-15 84.3 60 55.0
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 9.9e-15 84.0 80 40.0
PGSC0003DMG400009170 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.2e-14 82.8 60 56.7
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.1e-13 80.5 80 38.8
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.4e-13 80.1 59 54.2
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 1.9e-13 79.7 76 46.1
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.9e-13 79.7 65 47.7
PGSC0003DMG400016074 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.1e-13 78.6 68 50.0
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 9.2e-13 77.4 89 34.8
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 9.2e-13 77.4 90 33.3
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 9.2e-13 77.4 80 35.0
PGSC0003DMG400045208 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-12 77.0 58 56.9
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.2e-12 77.0 94 35.1
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.7e-12 75.9 56 53.6
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 7.8e-12 74.3 83 36.1
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.8e-12 74.3 58 48.3
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.8e-12 74.3 83 36.1
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.8e-12 74.3 83 36.1
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.8e-12 74.3 83 36.1
PGSC0003DMG400043524 Solanum tuberosum HOM05D008032 ORTHO05D000006 1.7e-11 73.2 59 49.2
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 1.7e-11 73.2 86 36.0
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.1e-11 71.6 63 46.0
PGSC0003DMG400029006 Solanum tuberosum HOM05D000001 ORTHO05D011642 1.1e-10 70.5 52 50.0
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 2.5e-10 69.3 133 36.8
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 2.5e-10 69.3 79 35.4
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 5.6e-10 68.2 68 39.7
PGSC0003DMG400040082 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.6e-10 68.2 45 68.9
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 9.6e-10 67.4 89 32.6
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 1.6e-09 66.6 67 40.3
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 1.6e-09 66.6 92 29.3
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 1.6e-09 66.6 90 28.9
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.6e-09 66.6 82 32.9
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 4.7e-09 65.1 65 41.5
PGSC0003DMG400027282 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.7e-09 65.1 50 56.0
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 1.4e-08 63.5 91 29.7
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 1.8e-08 63.2 83 30.1
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 1.8e-08 63.2 138 29.0
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 2.4e-08 62.8 89 29.2
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-08 62.8 89 29.2
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 3.1e-08 62.4 71 36.6
PGSC0003DMG400020925 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.1e-08 62.4 46 52.2
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 6.8e-08 61.2 86 31.4
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 8.9e-08 60.8 64 35.9
PGSC0003DMG400026459 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.9e-08 60.8 40 60.0
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-07 60.1 55 40.0
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-07 59.7 46 50.0
Nitab4.5_0000197g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.4e-07 58.5 87 37.9
Sopen02g009420 Solanum pennellii HOM05D002138 ORTHO05D000004 7.6e-07 57.8 53 52.8
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 9.9e-07 57.4 138 26.8
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-06 57.0 93 31.2
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 1.7e-06 56.6 58 44.8
Dinv38294 Davidia involucrata HOM05D010100 ORTHO05D006370 1.7e-06 56.6 61 39.3
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 1.7e-06 56.6 58 44.8
PGSC0003DMG400045088 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.7e-06 56.6 91 30.8
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-06 55.8 63 38.1
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 3.8e-06 55.5 89 25.8
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 4.9e-06 55.1 91 29.7
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 8.4e-06 54.3 57 40.4
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 8.4e-06 54.3 57 35.1


User provided reference genes

Program Settings