Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401025314 Solanum tuberosum HOM05D000966 ORTHO05D004359 9.1e-221 770.0 407 100.0
Sopen04g025730 Solanum pennellii HOM05D000966 ORTHO05D004359 3.1e-197 691.8 402 89.1
Solyc04g057880.3 Solanum lycopersicum HOM05D000966 ORTHO05D004359 8.6e-195 683.7 402 88.1
Nitab4.5_0003978g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.6e-156 556.6 402 72.9
Peaxi162Scf00066g00223 Petunia axillaris HOM05D000966 ORTHO05D004359 4.0e-136 488.8 404 68.1
Nitab4.5_0000317g0220 Nicotiana tabacum HOM05D000966 ORTHO05D004359 6.5e-118 428.3 403 61.3
Nitab4.5_0005166g0010 Nicotiana tabacum HOM05D000966 ORTHO05D004359 2.9e-94 349.7 403 52.1
Peaxi162Scf00591g00715 Petunia axillaris HOM05D000966 ORTHO05D004359 6.5e-94 348.6 404 51.7
Nitab4.5_0000418g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.1e-93 347.8 406 51.0
CAN.G531.16 Capsicum annuum HOM05D000966 ORTHO05D004359 3.3e-90 336.3 403 50.1
Sopen06g020060 Solanum pennellii HOM05D000966 ORTHO05D004359 7.0e-88 328.6 403 50.1
Solyc06g059960.4 Solanum lycopersicum HOM05D000966 ORTHO05D004359 1.8e-72 277.3 336 49.1
Dinv27269 Davidia involucrata HOM05D000966 ORTHO05D004359 1.4e-43 181.4 430 35.6
Dinv14693 Davidia involucrata HOM05D000966 ORTHO05D004359 3.8e-41 173.3 418 34.2
Cc10_g13740 Coffea canephora HOM05D000966 ORTHO05D004359 4.8e-20 103.2 203 36.0
Lj7A351G47 Lonicera japonica HOM05D000966 ORTHO05D004359 2.0e-18 97.8 414 27.5
Actinidia15211 Actinidia chinensis HOM05D000966 ORTHO05D004359 4.5e-18 96.7 440 28.9
Rhsim06G0088400 Rhododendron simsii HOM05D000966 ORTHO05D004359 1.3e-17 95.1 350 30.0
Actinidia21275 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.3e-14 85.1 433 26.3
TAR625G0972 Trochodendron aralioides HOM05D000966 ORTHO05D004359 6.2e-12 76.3 440 26.8
GSVIVG01008805001 Vitis vinifera HOM05D000966 ORTHO05D004359 6.9e-11 72.8 274 30.3
Oeu040397.2 Olea europaea HOM05D000966 ORTHO05D004359 9.0e-11 72.4 197 31.5
SalBow2G0813 Salvia bowleyana HOM05D000966 ORTHO05D004359 9.0e-11 72.4 348 27.0
TAR381G1211 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.5e-10 71.6 349 28.4
Haze_17638 Corylus avellana HOM05D000966 ORTHO05D004359 2.0e-10 71.2 435 24.8
Gohir.A02G070700 Gossypium hirsutum HOM05D000966 ORTHO05D004359 2.0e-10 71.2 372 25.0
MSTRG.1411 Avicennia marina HOM05D000966 ORTHO05D004359 3.4e-10 70.5 248 29.4
QL09p032394 Quercus lobata HOM05D000966 ORTHO05D004359 3.4e-10 70.5 261 29.9
Manes.02G168600 Manihot esculenta HOM05D000966 ORTHO05D004359 1.0e-09 68.9 426 24.6
Gorai.005G087500 Gossypium raimondii HOM05D000966 ORTHO05D004359 1.3e-09 68.6 372 25.0
TAR229G0005 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.3e-09 68.6 343 28.3
Gohir.D02G077900 Gossypium hirsutum HOM05D000966 ORTHO05D004359 2.2e-09 67.8 227 29.1
SalBow7G0355 Salvia bowleyana HOM05D000966 ORTHO05D004359 6.5e-09 66.2 235 30.6
SalBow7G2771 Salvia bowleyana HOM05D000966 ORTHO05D004359 6.5e-09 66.2 235 30.6
Cfa018425 Carpinus fangiana HOM05D000966 ORTHO05D004359 1.4e-08 65.1 436 24.5
Migut.N03259 Erythranthe guttata HOM05D000966 ORTHO05D004359 3.2e-08 63.9 326 28.5
Duzib093G1496 Durio zibethinus HOM05D000966 ORTHO05D004359 5.5e-08 63.2 356 23.6
CiPaw.16G022600 Carya illinoinensis HOM05D000966 ORTHO05D004359 9.3e-08 62.4 419 24.1
SGA_v2.0_scaffold28G11969 Striga asiatica HOM05D000966 ORTHO05D004359 1.2e-07 62.0 273 28.2
MD15G1133700 Malus domestica HOM05D000966 ORTHO05D004359 1.6e-07 61.6 249 25.3
MD08G1159600 Malus domestica HOM05D000966 ORTHO05D004359 2.1e-07 61.2 251 27.9
Duzib041G0231 Durio zibethinus HOM05D000966 ORTHO05D004359 1.0e-06 58.9 372 24.5
PGR042G2231 Punica granatum HOM05D000966 ORTHO05D004359 1.3e-06 58.5 289 27.0
TWI32G0333 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 1.8e-06 58.2 402 23.6
FAN27G3367 Fragaria x ananassa HOM05D000966 ORTHO05D004359 2.3e-06 57.8 324 27.5
CANSAT25G2222 Cannabis sativa HOM05D000966 ORTHO05D004359 3.0e-06 57.4 207 30.4
Potri.005G182100 Populus trichocarpa HOM05D000966 ORTHO05D004359 3.0e-06 57.4 386 25.6
Manes.18G082550 Manihot esculenta HOM05D000966 ORTHO05D004359 5.1e-06 56.6 437 25.4
Atru.chr13.1574 Acer truncatum HOM05D000966 ORTHO05D004359 8.7e-06 55.8 238 29.0
FAN15G1688 Fragaria x ananassa HOM05D000966 ORTHO05D004359 8.7e-06 55.8 324 27.5


User provided reference genes

Program Settings