Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401024077 Solanum tuberosum HOM05D000188 ORTHO05D029234 3.7e-56 222.6 276 100.0
CAN.G801.5 Capsicum annuum HOM05D000188 ORTHO05D000362 1.6e-22 110.9 63 84.1
Nitab4.5_0008374g0010 Nicotiana tabacum HOM05D000188 ORTHO05D000362 1.6e-19 100.9 63 76.2
Nitab4.5_0007078g0010 Nicotiana tabacum HOM05D000188 ORTHO05D000362 1.8e-18 97.4 63 73.0
PGSC0003DMG400024080 Solanum tuberosum HOM05D000188 ORTHO05D000362 3.0e-18 96.7 63 73.0
Solyc03g031910.3 Solanum lycopersicum HOM05D000188 ORTHO05D000362 5.2e-18 95.9 64 71.9
Sopen03g005780 Solanum pennellii HOM05D000188 ORTHO05D000362 5.2e-18 95.9 64 71.9
Sopen03g005770 Solanum pennellii HOM05D000188 ORTHO05D000362 6.7e-18 95.5 63 73.0
Nitab4.5_0000091g0070 Nicotiana tabacum HOM05D000188 ORTHO05D029234 1.2e-17 94.7 63 73.0
Peaxi162Scf00521g00116 Petunia axillaris HOM05D000188 ORTHO05D000362 1.5e-17 94.4 62 72.6
Solyc03g031900.2 Solanum lycopersicum HOM05D000188 ORTHO05D000362 2.6e-17 93.6 63 71.4
CAN.G801.6 Capsicum annuum HOM05D000188 ORTHO05D000362 9.7e-17 91.7 63 69.8
CAN.G801.4 Capsicum annuum HOM05D000188 ORTHO05D000362 1.3e-16 91.3 53 81.1
Nitab4.5_0000181g0020 Nicotiana tabacum HOM05D000188 ORTHO05D000362 1.8e-15 87.4 63 65.1
Peaxi162Scf00521g00015 Petunia axillaris HOM05D000188 ORTHO05D000362 2.4e-15 87.0 63 63.5
Peaxi162Scf00521g00006 Petunia axillaris HOM05D000188 ORTHO05D000362 9.1e-15 85.1 61 68.9
Nitab4.5_0003581g0020 Nicotiana tabacum HOM05D000188 ORTHO05D000362 1.7e-13 80.9 63 61.9
Peaxi162Scf00066g01221 Petunia axillaris HOM05D000188 ORTHO05D000362 8.5e-13 78.6 61 59.0
Sopen06g004860 Solanum pennellii HOM05D000188 ORTHO05D000362 1.6e-11 74.3 62 56.5
PGSC0003DMG400037817 Solanum tuberosum HOM05D000188 ORTHO05D000362 3.6e-11 73.2 62 54.8
Dinv28261 Davidia involucrata HOM05D000188 ORTHO05D000362 4.7e-11 72.8 61 57.4
Potri.017G140501 Populus trichocarpa HOM05D000188 ORTHO05D000362 6.1e-11 72.4 62 56.5
Nitab4.5_0000091g0010 Nicotiana tabacum HOM05D000188 ORTHO05D000362 8.0e-11 72.0 45 73.3
Haze_14339 Corylus avellana HOM05D000188 ORTHO05D000362 1.4e-10 71.2 61 52.5
Potri.017G140200 Populus trichocarpa HOM05D000188 ORTHO05D000362 2.3e-10 70.5 61 55.7
Solyc06g010100.2 Solanum lycopersicum HOM05D001528 ORTHO05D002760 3.0e-10 70.1 62 53.2
Dinv19092 Davidia involucrata HOM05D000188 ORTHO05D000362 4.0e-10 69.7 61 54.1
Potri.017G140300 Populus trichocarpa HOM05D000188 ORTHO05D000362 5.2e-10 69.3 61 55.7
Dinv28264 Davidia involucrata HOM05D000188 ORTHO05D000362 6.8e-10 68.9 62 56.5
Cfa007738 Carpinus fangiana HOM05D000188 ORTHO05D000362 1.5e-09 67.8 61 50.8
Nitab4.5_0001374g0070 Nicotiana tabacum HOM05D000188 ORTHO05D000362 1.5e-09 67.8 54 64.8
Potri.017G140601 Populus trichocarpa HOM05D000188 ORTHO05D000362 1.5e-09 67.8 61 54.1
TAR629G2503 Trochodendron aralioides HOM05D000188 ORTHO05D000362 2.0e-09 67.4 63 57.1
Dinv28265 Davidia involucrata HOM05D000188 ORTHO05D000362 2.6e-09 67.0 61 54.1
Dinv44559 Davidia involucrata HOM05D000188 ORTHO05D029234 2.6e-09 67.0 61 52.5
Lj2A509T26 Lonicera japonica HOM05D000188 ORTHO05D000362 4.4e-09 66.2 61 52.5
Oeu012505.1 Olea europaea HOM05D000188 ORTHO05D000362 4.4e-09 66.2 63 52.4
RcHm_v2.0_Chr3g0488061 Rosa chinensis HOM05D000188 ORTHO05D000362 7.5e-09 65.5 64 53.1
Cfa007739 Carpinus fangiana HOM05D000188 ORTHO05D000362 9.8e-09 65.1 59 50.8
Potri.004G077500 Populus trichocarpa HOM05D000188 ORTHO05D000362 9.8e-09 65.1 64 53.1
Oeu012504.1 Olea europaea HOM05D000188 ORTHO05D000362 1.3e-08 64.7 62 54.8
Potri.004G077600 Populus trichocarpa HOM05D000188 ORTHO05D000362 1.7e-08 64.3 64 54.7
Prupe.3G013100 Prunus persica HOM05D000188 ORTHO05D000362 1.7e-08 64.3 60 55.0
QL05p088460 Quercus lobata HOM05D000188 ORTHO05D000362 1.7e-08 64.3 60 51.7
GSVIVG01028740001 Vitis vinifera HOM05D000188 ORTHO05D000362 1.7e-08 64.3 61 50.8
Prupe.1G202100 Prunus persica HOM05D000188 ORTHO05D000362 2.2e-08 63.9 61 52.5
QL05p088494 Quercus lobata HOM05D000188 ORTHO05D000362 2.2e-08 63.9 60 50.0
Sabra17G0118200 Salix brachista HOM05D000188 ORTHO05D000362 2.2e-08 63.9 62 53.2
Cfa007740 Carpinus fangiana HOM05D000188 ORTHO05D000362 4.8e-08 62.8 60 48.3
Sabra04G0051300 Salix brachista HOM05D000188 ORTHO05D000362 6.3e-08 62.4 62 51.6
Haze_14338 Corylus avellana HOM05D000188 ORTHO05D000362 8.3e-08 62.0 59 47.5
Potri.004G077700 Populus trichocarpa HOM05D000188 ORTHO05D000362 8.3e-08 62.0 61 52.5
QL05p088476 Quercus lobata HOM05D000188 ORTHO05D000362 8.3e-08 62.0 60 48.3
vmacro18502 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 8.3e-08 62.0 61 49.2
Migut.H02221 Erythranthe guttata HOM05D000188 ORTHO05D000362 1.1e-07 61.6 62 53.2
Oeu060823.1 Olea europaea HOM05D000188 ORTHO05D000362 1.1e-07 61.6 63 50.8
RcHm_v2.0_Chr3g0488221 Rosa chinensis HOM05D000188 ORTHO05D000362 1.1e-07 61.6 64 51.6
Sabra04G0051600 Salix brachista HOM05D000188 ORTHO05D000362 1.1e-07 61.6 61 52.5
Sabra04G0051500 Salix brachista HOM05D000188 ORTHO05D000362 1.4e-07 61.2 62 51.6
CiPaw.01G208100 Carya illinoinensis HOM05D000188 ORTHO05D000362 1.8e-07 60.8 62 46.8
Aqoxy3G03740 Aquilegia oxysepala HOM05D000188 ORTHO05D000362 2.4e-07 60.5 64 51.6
MD09G1281400 Malus domestica HOM05D000188 ORTHO05D000362 2.4e-07 60.5 60 50.0
Prupe.1G201900 Prunus persica HOM05D000188 ORTHO05D000362 2.4e-07 60.5 62 53.2
vmacro18501 Vaccinium macrocarpon HOM05D000188 ORTHO05D000362 2.4e-07 60.5 61 49.2
Lsat_1_v5_gn_2_71921 Lactuca sativa HOM05D000188 ORTHO05D000362 3.1e-07 60.1 63 54.0
RcHm_v2.0_Chr3g0488111 Rosa chinensis HOM05D000188 ORTHO05D000362 3.1e-07 60.1 64 48.4
RcHm_v2.0_Chr6g0264601 Rosa chinensis HOM05D000188 ORTHO05D000362 3.1e-07 60.1 61 49.2
FvH4_1g27541 Fragaria vesca HOM05D000188 ORTHO05D000362 4.1e-07 59.7 63 47.6
FAN19G2856 Fragaria x ananassa HOM05D000188 ORTHO05D000362 4.1e-07 59.7 63 47.6
FAN28G0099 Fragaria x ananassa HOM05D000188 ORTHO05D000362 4.1e-07 59.7 63 47.6
Lj4C250G8 Lonicera japonica HOM05D000188 ORTHO05D000362 4.1e-07 59.7 63 49.2
Cpa.g.sc108.1 Carica papaya HOM05D000188 ORTHO05D000362 5.4e-07 59.3 61 50.8
Glyma.18G045600 Glycine max HOM05D000188 ORTHO05D000362 5.4e-07 59.3 62 51.6
Phvul.006G085300 Phaseolus vulgaris HOM05D000188 ORTHO05D000362 5.4e-07 59.3 61 47.5
FvH4_3g00170 Fragaria vesca HOM05D000188 ORTHO05D000362 7.0e-07 58.9 63 46.0
Rhsim08G0022600 Rhododendron simsii HOM05D000188 ORTHO05D000362 7.0e-07 58.9 62 48.4
CSS0000971 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 1.2e-06 58.2 60 50.0
FAN19G1249 Fragaria x ananassa HOM05D000188 ORTHO05D000362 1.2e-06 58.2 61 52.5
HanXRQChr14g0443331 Helianthus annuus HOM05D000188 ORTHO05D000362 1.2e-06 58.2 63 52.4
Prupe.1G202500 Prunus persica HOM05D000188 ORTHO05D000362 1.2e-06 58.2 61 49.2
Hund13114 Selenicereus undatus HOM05D000188 ORTHO05D000362 1.2e-06 58.2 60 46.7
FvH4_1g26390 Fragaria vesca HOM05D000188 ORTHO05D000362 1.6e-06 57.8 61 52.5
QL04p067222 Quercus lobata HOM05D000188 ORTHO05D000362 1.6e-06 57.8 60 46.7
Rhsim08G0022500 Rhododendron simsii HOM05D000188 ORTHO05D000362 1.6e-06 57.8 62 46.8
Sabra04G0051100 Salix brachista HOM05D000188 ORTHO05D000362 1.6e-06 57.8 64 48.4
CSS0035125 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D000362 2.0e-06 57.4 62 48.4
Migut.H02220 Erythranthe guttata HOM05D000188 ORTHO05D000362 2.0e-06 57.4 69 46.4
Potri.004G077650 Populus trichocarpa HOM05D000188 ORTHO05D000362 2.0e-06 57.4 60 50.0
RcHm_v2.0_Chr6g0264641 Rosa chinensis HOM05D000188 ORTHO05D000362 2.0e-06 57.4 60 50.0
Aqoxy3G03739 Aquilegia oxysepala HOM05D000188 ORTHO05D000362 2.7e-06 57.0 63 52.4
Aqoxy7G00768 Aquilegia oxysepala HOM05D000188 ORTHO05D000362 3.5e-06 56.6 61 57.4
CSS0017600 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D000362 3.5e-06 56.6 63 46.0
TWI18G1072 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 3.5e-06 56.6 62 48.4
TAR371G0069 Trochodendron aralioides HOM05D000188 ORTHO05D000362 3.5e-06 56.6 62 51.6
CiPaw.04G050200 Carya illinoinensis HOM05D000188 ORTHO05D000362 4.5e-06 56.2 63 44.4
Thecc.05G186800 Theobroma cacao HOM05D000188 ORTHO05D000362 4.5e-06 56.2 66 47.0
Actinidia35702 Actinidia chinensis HOM05D000188 ORTHO05D000362 5.9e-06 55.8 61 49.2
Aqoxy3G03727 Aquilegia oxysepala HOM05D000188 ORTHO05D000362 5.9e-06 55.8 63 52.4
FAN23G2484 Fragaria x ananassa HOM05D000188 ORTHO05D000362 5.9e-06 55.8 61 45.9
Manes.01G124900 Manihot esculenta HOM05D000188 ORTHO05D000362 5.9e-06 55.8 62 50.0
Potri.004G077800 Populus trichocarpa HOM05D000188 ORTHO05D000362 5.9e-06 55.8 60 50.0
VMungo0540G1325 Vigna mungo HOM05D000188 ORTHO05D000362 5.9e-06 55.8 62 48.4
Haze_16197 Corylus avellana HOM05D000188 ORTHO05D000362 7.7e-06 55.5 59 47.5
Duzib128G1791 Durio zibethinus HOM05D000188 ORTHO05D000362 7.7e-06 55.5 61 47.5
QL02p063939 Quercus lobata HOM05D000188 ORTHO05D000362 7.7e-06 55.5 61 44.3


User provided reference genes

Program Settings