Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401020091 Solanum tuberosum HOM05D006896 ORTHO05D007622 1.1e-89 333.6 207 100.0
Sopen06g034890 Solanum pennellii HOM05D006896 ORTHO05D007622 3.8e-66 255.4 207 82.1
Nitab4.5_0002546g0010 Nicotiana tabacum HOM05D006896 ORTHO05D007622 9.7e-62 240.7 207 74.9
Nitab4.5_0001057g0240 Nicotiana tabacum HOM05D006896 ORTHO05D007622 4.8e-61 238.4 207 74.4
PGSC0003DMG400024908 Solanum tuberosum HOM05D006896 ORTHO05D007622 2.2e-58 229.6 190 83.2
CAN.G855.24 Capsicum annuum HOM05D006896 ORTHO05D007622 3.6e-56 222.2 208 77.4
Peaxi162Scf00152g00734 Petunia axillaris HOM05D006896 ORTHO05D007622 6.1e-56 221.5 207 72.5
Solyc06g083505.1 Solanum lycopersicum HOM05D006896 ORTHO05D007622 2.7e-51 206.1 140 76.4
Cc02_g30070 Coffea canephora HOM05D006896 ORTHO05D007622 2.8e-32 142.9 152 50.0
Cc04_g02450 Coffea canephora HOM05D006896 ORTHO05D007622 1.4e-28 130.6 145 46.9
DCAR_021683 Daucus carota HOM05D006896 ORTHO05D007622 5.6e-25 118.6 204 38.7
Actinidia05615 Actinidia chinensis HOM05D006896 ORTHO05D007622 2.1e-24 116.7 157 47.1
TAR636G1166 Trochodendron aralioides HOM05D006896 ORTHO05D007622 8.9e-23 111.3 211 45.0
Eucgr.F03083 Eucalyptus grandis HOM05D006896 ORTHO05D007622 2.0e-22 110.2 153 42.5
GSVIVG01016958001 Vitis vinifera HOM05D006896 ORTHO05D007622 9.9e-22 107.8 206 49.5
DCAR_023372 Daucus carota HOM05D001895 ORTHO05D002082 4.9e-21 105.5 148 39.9
Ciclev10026494m.g Citrus clementina HOM05D006896 ORTHO05D007622 6.0e-19 98.6 135 43.0
unitig_27.g25077 Utricularia gibba HOM05D006896 ORTHO05D007622 7.8e-19 98.2 144 40.3
Manes.04G135200 Manihot esculenta HOM05D006896 ORTHO05D007622 1.3e-18 97.4 134 44.0
CiPaw.04G076100 Carya illinoinensis HOM05D006896 ORTHO05D007622 8.6e-18 94.7 153 39.9
Nn1g00183 Nelumbo nucifera HOM05D006896 ORTHO05D007622 8.6e-18 94.7 206 41.7
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.1e-17 94.4 144 41.0
Ciclev10022257m.g Citrus clementina HOM05D006896 ORTHO05D007622 1.5e-17 94.0 135 40.7
RhsimUnG0044500 Rhododendron simsii HOM05D006896 ORTHO05D007622 1.5e-17 94.0 124 44.4
Aqoxy3G03866 Aquilegia oxysepala HOM05D006896 ORTHO05D007622 2.4e-15 86.7 141 39.0
SalBow1G2551 Salvia bowleyana HOM05D006896 ORTHO05D007622 2.4e-15 86.7 116 38.8
Migut.I00962 Erythranthe guttata HOM05D006896 ORTHO05D007622 3.1e-15 86.3 158 36.1
Lsat_1_v5_gn_7_60640 Lactuca sativa HOM05D006896 ORTHO05D007622 3.1e-15 86.3 156 39.1
Cpa.g.sc25.137 Carica papaya HOM05D006896 ORTHO05D007622 1.2e-14 84.3 136 39.0
PGR102G1058 Punica granatum HOM05D006896 ORTHO05D007622 1.5e-14 84.0 149 33.6
MELO3C024432.2 Cucumis melo HOM05D006896 ORTHO05D007622 3.4e-14 82.8 154 38.3
CsaV3_7G035230 Cucumis sativus L. HOM05D006896 ORTHO05D007622 3.4e-14 82.8 153 37.9
PSO210G5688 Papaver somniferum HOM05D006896 ORTHO05D007622 1.3e-13 80.9 163 38.0
HanXRQChr04g0122251 Helianthus annuus HOM05D006896 ORTHO05D007622 2.2e-13 80.1 188 42.6
THA.LOC104825918 Tarenaya hassleriana HOM05D006896 ORTHO05D007622 2.9e-13 79.7 167 45.5
Sc15g0001740 Simmondsia chinensis HOM05D006896 ORTHO05D007622 1.1e-12 77.8 139 35.3
ECA240G1433 Erigeron canadensis HOM05D006896 ORTHO05D007622 1.9e-12 77.0 153 34.6
Gohir.A09G147400 Gossypium hirsutum HOM05D006896 ORTHO05D007622 1.9e-12 77.0 143 35.0
Haze_24358 Corylus avellana HOM05D006896 ORTHO05D007622 2.4e-12 76.6 217 37.3
Gohir.D09G143000 Gossypium hirsutum HOM05D006896 ORTHO05D007622 2.4e-12 76.6 143 35.0
Gorai.006G164500 Gossypium raimondii HOM05D006896 ORTHO05D007622 2.4e-12 76.6 143 35.0
Potri.003G047600 Populus trichocarpa HOM05D006896 ORTHO05D007622 2.4e-12 76.6 192 45.8
Aa31LG5G1310 Aethionema arabicum HOM05D006896 ORTHO05D007622 3.2e-12 76.3 157 38.2
CANSAT21G0002 Cannabis sativa HOM05D006896 ORTHO05D007622 4.2e-12 75.9 153 36.6
BcaB05g23986 Brassica carinata HOM05D006896 ORTHO05D007622 3.5e-11 72.8 153 32.7
ECA233G6105 Erigeron canadensis HOM05D006896 ORTHO05D007622 4.6e-11 72.4 155 34.8
Thecc.01G002700 Theobroma cacao HOM05D006896 ORTHO05D007622 7.8e-11 71.6 144 34.7
TWI75G0052 Tripterygium wilfordii HOM05D006896 ORTHO05D007622 1.3e-10 70.9 153 34.0
Ah.06g194440 Amaranthus hybridus HOM05D006896 ORTHO05D007622 1.7e-10 70.5 129 39.5
Sabra03G0029600 Salix brachista HOM05D000996 ORTHO05D000858 1.7e-10 70.5 135 38.5
Zm00001eb122950 Zea mays HOM05D006896 ORTHO05D007622 2.3e-10 70.1 131 35.1
Thhalv10028974m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 3.0e-10 69.7 147 35.4
MD15G1357300 Malus domestica HOM05D006896 ORTHO05D007622 3.9e-10 69.3 162 34.6
Hund07447 Selenicereus undatus HOM05D006896 ORTHO05D007622 3.9e-10 69.3 156 35.3
Thhalv10023695m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 5.1e-10 68.9 158 35.4
MD08G1165000 Malus domestica HOM05D006896 ORTHO05D007622 8.7e-10 68.2 165 33.9
A07p06970 Brassica napus HOM05D006896 ORTHO05D007622 1.1e-09 67.8 155 33.5
Glyma.15G077800 Glycine max HOM05D006896 ORTHO05D007622 1.1e-09 67.8 143 33.6
Glyma.15G171400 Glycine max HOM05D006896 ORTHO05D007622 1.1e-09 67.8 143 33.6
Phvul.006G182200 Phaseolus vulgaris HOM05D006896 ORTHO05D007622 1.1e-09 67.8 163 35.0
QL06p022383 Quercus lobata HOM05D006896 ORTHO05D007622 1.1e-09 67.8 155 34.2
SalBow2G3180 Salvia bowleyana HOM05D006896 ORTHO05D007622 1.5e-09 67.4 79 44.3
Carub.0006s3560 Capsella rubella HOM05D006896 ORTHO05D007622 1.9e-09 67.0 146 35.6
AL6G51750 Arabidopsis lyrata HOM05D006896 ORTHO05D007622 2.5e-09 66.6 151 31.8
EL10Ac4g10121 Beta vulgaris HOM05D006896 ORTHO05D007622 4.3e-09 65.9 156 32.7
EL10Ac4g10168 Beta vulgaris HOM05D006896 ORTHO05D007622 4.3e-09 65.9 156 32.7
TAR636G1722 Trochodendron aralioides HOM05D006896 ORTHO05D007622 1.2e-08 64.3 114 37.7
AT4G01590 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 1.6e-08 63.9 143 31.5
PSO210G1164 Papaver somniferum HOM05D006896 ORTHO05D007622 4.7e-08 62.4 111 40.5
Os07g0611600 Oryza sativa ssp. japonica HOM05D006896 ORTHO05D007622 1.1e-07 61.2 160 32.5
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 2.4e-07 60.1 155 33.5
VMungo0540G0426 Vigna mungo HOM05D006896 ORTHO05D007622 2.4e-07 60.1 153 34.6
Cfa015335 Carpinus fangiana HOM05D006896 ORTHO05D007622 5.3e-07 58.9 164 33.5
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 6.9e-07 58.5 157 31.8
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 9.0e-07 58.2 157 31.8
AT4G35685 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 5.8e-06 55.5 157 29.9


User provided reference genes

Program Settings