Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.1e-167 593.2 293 100.0
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 6.7e-40 168.7 253 45.1
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 4.3e-39 166.0 249 45.0
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 7.1e-34 148.7 252 40.9
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 2.1e-25 120.6 251 33.5
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 2.2e-19 100.5 250 32.8
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 2.9e-19 100.1 249 32.9
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.5e-18 97.1 273 33.0
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 1.2e-17 94.7 248 30.2
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 1.6e-17 94.4 258 30.2
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 3.6e-17 93.2 250 32.0
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 3.6e-17 93.2 267 30.0
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.5e-15 87.8 254 31.1
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 5.7e-15 85.9 253 28.5
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 4.8e-14 82.8 249 30.1
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 4.8e-14 82.8 256 28.9
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 4.8e-14 82.8 254 28.7
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 8.2e-14 82.0 248 31.9
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.1e-13 81.6 258 29.1
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.4e-13 81.3 252 29.4
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.8e-13 80.9 132 37.9
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.8e-13 80.9 132 37.9
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 3.1e-13 80.1 241 31.1
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 1.2e-12 78.2 252 29.0
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 2.6e-12 77.0 251 27.9
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 4.5e-12 76.3 250 30.0
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 7.7e-12 75.5 242 29.8
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.3e-11 74.7 256 27.3
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.8e-11 73.2 240 29.6
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 3.8e-11 73.2 258 29.5
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.4e-10 71.2 256 28.5
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 5.5e-10 69.3 138 41.3
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.6e-09 67.8 138 39.1
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 2.7e-09 67.0 237 26.6
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 2.7e-09 67.0 251 25.9
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.7e-09 67.0 35 97.1
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 3.6e-09 66.6 257 26.5
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 4.7e-09 66.2 256 26.2
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 6.1e-09 65.9 254 27.6
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.4e-08 64.7 258 27.9
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 3.0e-08 63.5 255 25.1
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 3.9e-08 63.2 251 26.3
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 5.1e-08 62.8 220 26.4
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 6.7e-08 62.4 95 41.1
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.5e-07 61.2 252 25.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.5e-07 61.2 246 24.0
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.6e-07 60.5 46 63.0
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 5.7e-07 59.3 252 26.6
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 5.7e-07 59.3 260 25.8
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 5.7e-07 59.3 253 27.7
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 5.7e-07 59.3 246 23.2
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 9.7e-07 58.5 251 24.7
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 9.7e-07 58.5 256 25.0
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.7e-06 57.8 253 26.5
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 2.8e-06 57.0 252 25.0
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 8.2e-06 55.5 254 26.0


User provided reference genes

Program Settings