Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.0e-249 866.3 455 100.0
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 9.1e-246 853.2 455 98.2
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.1e-242 842.0 459 97.2
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.3e-228 795.4 463 90.5
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.4e-222 774.2 464 88.6
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 8.6e-220 766.9 463 87.9
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 2.3e-212 742.3 414 91.3
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.7e-205 718.8 462 80.1
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.4e-201 706.4 463 79.5
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.1e-201 705.3 468 77.8
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 2.0e-200 702.6 461 78.7
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 8.4e-199 697.2 463 76.0
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 1.1e-198 696.8 479 75.4
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 5.4e-198 694.5 467 77.3
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 2.7e-197 692.2 467 77.9
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 7.8e-197 690.6 463 78.0
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.3e-196 689.1 468 79.5
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 6.6e-196 687.6 468 79.5
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 8.6e-196 687.2 469 76.5
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.5e-195 686.4 463 73.9
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.9e-195 686.0 468 78.8
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.5e-195 685.6 465 80.0
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 2.8e-194 682.2 463 74.7
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 8.1e-194 680.6 461 74.4
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 1.4e-193 679.9 463 74.9
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.4e-193 679.9 463 75.6
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.9e-193 677.6 464 79.7
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.2e-192 676.8 464 74.8
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.5e-192 676.4 457 74.8
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 7.6e-192 674.1 463 73.9
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 9.3e-190 667.2 451 74.9
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.2e-189 666.8 460 73.9
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 1.6e-189 666.4 463 75.8
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.6e-189 666.4 467 74.1
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 2.1e-189 666.0 463 74.5
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 2.1e-189 666.0 468 75.4
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.7e-189 665.6 469 75.5
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 7.8e-189 664.1 458 75.3
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 7.8e-189 664.1 464 75.6
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.0e-188 663.7 460 73.7
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 1.0e-188 663.7 463 72.8
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 1.0e-188 663.7 457 75.1
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 1.7e-188 662.9 464 75.0
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.9e-188 661.8 463 73.0
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 3.9e-188 661.8 463 75.2
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 5.1e-188 661.4 463 75.6
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.1e-187 660.2 463 72.8
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.1e-187 660.2 455 72.7
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 2.5e-187 659.1 463 74.5
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 7.3e-187 657.5 455 73.8
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 2.1e-186 656.0 463 74.7
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.8e-186 655.6 464 74.6
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 3.6e-186 655.2 455 73.8
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 3.6e-186 655.2 484 70.7
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 2.4e-185 652.5 463 71.3
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.1e-185 652.1 463 74.1
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 6.9e-185 651.0 455 73.2
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.0e-184 649.4 461 72.9
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 2.6e-184 649.0 463 71.5
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 7.6e-184 647.5 463 70.6
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 9.9e-184 647.1 509 67.2
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 9.9e-184 647.1 455 72.1
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 4.9e-183 644.8 465 74.0
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.9e-183 644.8 457 73.1
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 7.1e-182 641.0 493 69.2
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 9.3e-182 640.6 463 70.4
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.2e-181 640.2 465 73.5
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 4.6e-181 638.3 421 74.1
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 4.6e-181 638.3 443 75.6
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 6.0e-181 637.9 468 70.3
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 7.9e-181 637.5 416 75.7
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 1.3e-180 636.7 463 70.6
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.3e-180 636.7 467 71.7
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.8e-180 636.3 425 75.3
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 6.7e-180 634.4 425 74.8
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 4.3e-179 631.7 461 72.7
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 5.6e-179 631.3 462 70.8
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 9.6e-179 630.6 416 75.0
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 3.7e-178 628.6 459 72.3
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 3.7e-178 628.6 459 72.3
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 3.7e-178 628.6 459 72.3
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.8e-177 626.3 465 70.8
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 2.4e-177 625.9 463 70.4
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.1e-177 625.5 462 69.7
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 4.0e-177 625.2 465 70.5
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.2e-176 623.6 463 71.1
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.2e-176 623.6 463 70.2
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 2.6e-176 622.5 465 69.9
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 4.5e-176 621.7 461 69.0
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.3e-175 620.2 461 70.7
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 6.4e-175 617.8 464 71.3
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 1.4e-174 616.7 464 71.1
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.4e-174 616.7 461 70.5
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 3.2e-174 615.5 464 70.9
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 3.2e-174 615.5 460 70.0
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.6e-173 613.2 462 70.1
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 8.7e-172 607.4 461 70.1
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 8.7e-172 607.4 487 66.9
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.1e-171 607.1 461 69.2
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 5.6e-171 604.7 401 75.1
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.6e-170 603.2 463 69.1
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 8.2e-170 600.9 466 68.0
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 2.6e-168 595.9 465 69.7
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 3.4e-168 595.5 461 66.6
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 5.8e-168 594.7 399 73.2
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 8.4e-167 590.9 453 67.3
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 2.1e-165 586.3 454 66.3
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 9.0e-161 570.9 391 73.1
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.5e-160 570.1 415 70.6
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.8e-153 546.6 418 64.1
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.4e-137 493.0 380 69.7
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 2.6e-136 489.6 318 77.0
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 2.4e-129 466.5 399 57.6
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 5.9e-128 461.8 406 57.6
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 7.5e-123 444.9 402 54.5
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 4.7e-117 425.6 460 52.2
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.1e-100 371.3 412 51.0
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.6e-96 357.5 260 74.6
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 2.8e-93 346.7 270 61.9
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 4.1e-89 332.8 535 36.4
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.7e-72 276.9 188 72.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 8.1e-69 265.4 267 58.4
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 6.9e-60 235.7 249 53.8
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 9.0e-60 235.3 249 53.8
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.9e-50 203.8 207 56.0
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 3.4e-43 180.3 121 80.2
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.4e-41 174.9 161 60.2
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.5e-41 174.1 146 63.7
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.6e-40 171.4 145 62.8
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.7e-34 151.4 123 64.2
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.6e-22 110.9 60 88.3
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.2e-17 94.0 57 82.5
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 8.8e-15 85.9 70 67.1
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.2e-14 85.5 59 69.5
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 2.4e-12 77.8 65 70.8


User provided reference genes

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