Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045213 Solanum tuberosum HOM05D025007 ORTHO05D017228 1.4e-130 469.5 231 100.0
PGSC0003DMG400038742 Solanum tuberosum HOM05D025007 ORTHO05D017228 2.1e-89 332.8 231 72.7
Sopen01g010140 Solanum pennellii HOM05D025007 ORTHO05D000093 8.8e-88 327.4 200 79.5
Solyc01g014970.1 Solanum lycopersicum HOM05D025007 ORTHO05D017228 1.2e-87 327.0 226 71.2
PGSC0003DMG400043429 Solanum tuberosum HOM05D025007 ORTHO05D017228 1.6e-81 306.6 214 73.4
Peaxi162Scf00011g00739 Petunia axillaris HOM05D025469 ORTHO05D017228 7.1e-13 78.6 79 51.9
Nitab4.5_0002698g0100 Nicotiana tabacum HOM05D025469 ORTHO05D017228 6.0e-12 75.5 76 56.6
Peaxi162Scf00011g00820 Petunia axillaris HOM05D025469 ORTHO05D001390 1.9e-10 70.5 115 34.8
Sopen01g046210 Solanum pennellii HOM05D000243 ORTHO05D014555 3.3e-10 69.7 70 60.0
Peaxi162Scf00011g00821 Petunia axillaris HOM05D025469 ORTHO05D017228 8.2e-09 65.1 74 44.6
Nitab4.5_0000948g0190 Nicotiana tabacum HOM05D025469 ORTHO05D017228 1.4e-08 64.3 85 49.4
Pp3c22_9600 Physcomitrium patens HOM05D000243 ORTHO05D000278 5.3e-08 62.4 62 45.2
HPP92_004658 Vanilla planifolia HOM05D000243 ORTHO05D000278 6.9e-08 62.0 62 48.4
AUR62027182 Chenopodium quinoa HOM05D000243 ORTHO05D000278 5.9e-07 58.9 67 41.8
AUR62044191 Chenopodium quinoa HOM05D000243 ORTHO05D001390 5.9e-07 58.9 67 41.8
ECA232G4381 Erigeron canadensis HOM05D000243 ORTHO05D000278 5.9e-07 58.9 59 45.8
Carub.0005s0155 Capsella rubella HOM05D000243 ORTHO05D000278 7.7e-07 58.5 113 37.2
Cc10_g02740 Coffea canephora HOM05D000243 ORTHO05D000278 7.7e-07 58.5 99 37.4
Thhalv10004643m.g Eutrema salsugineum HOM05D000243 ORTHO05D000278 7.7e-07 58.5 119 33.6
Dinv14564 Davidia involucrata HOM05D000623 ORTHO05D002156 1.0e-06 58.2 65 40.0
Lalb_Chr07g0176821 Lupinus albus HOM05D000243 ORTHO05D000278 1.0e-06 58.2 223 25.1
Sabra02G0028200 Salix brachista HOM05D000243 ORTHO05D000278 1.0e-06 58.2 49 57.1
EL10Ac6g13972 Beta vulgaris HOM05D000243 ORTHO05D000278 1.3e-06 57.8 73 39.7
Manes.18G023700 Manihot esculenta HOM05D000243 ORTHO05D000278 1.3e-06 57.8 71 45.1
Potri.002G035200 Populus trichocarpa HOM05D000243 ORTHO05D000278 1.3e-06 57.8 49 57.1
unitig_578.g16072 Utricularia gibba HOM05D000243 ORTHO05D000278 1.3e-06 57.8 100 36.0
Pp3c18_12880 Physcomitrium patens HOM05D000243 ORTHO05D000278 1.7e-06 57.4 54 46.3
TWI36G1087 Tripterygium wilfordii HOM05D000243 ORTHO05D000278 1.7e-06 57.4 52 53.8
AT2G02540 Arabidopsis thaliana HOM05D000243 ORTHO05D000278 2.2e-06 57.0 59 49.2
Duzib116G0166 Durio zibethinus HOM05D000243 ORTHO05D000278 2.2e-06 57.0 56 44.6
ECA232G2541 Erigeron canadensis HOM05D000243 ORTHO05D000278 2.2e-06 57.0 64 45.3
Medtr5g020510 Medicago truncatula HOM05D000243 ORTHO05D000278 2.2e-06 57.0 65 40.0
PSO447G0085 Papaver somniferum HOM05D000243 ORTHO05D000278 2.2e-06 57.0 54 48.1
Potri.019G021400 Populus trichocarpa HOM05D000243 ORTHO05D001390 2.2e-06 57.0 85 35.3
Sp2g13770 Schrenkiella parvula HOM05D000243 ORTHO05D000278 2.2e-06 57.0 191 26.2
Gohir.D05G196400 Gossypium hirsutum HOM05D000243 ORTHO05D000278 2.9e-06 56.6 70 40.0
Lalb_Chr13g0304441 Lupinus albus HOM05D000243 ORTHO05D000278 2.9e-06 56.6 54 48.1
Potri.007G024100 Populus trichocarpa HOM05D000243 ORTHO05D000278 2.9e-06 56.6 49 51.0
SEGI_00296 Sequoiadendron giganteum HOM05D000243 ORTHO05D000278 2.9e-06 56.6 61 44.3
SEGI_18522 Sequoiadendron giganteum HOM05D000243 ORTHO05D000278 2.9e-06 56.6 61 44.3
Solyc01g103830.1 Solanum lycopersicum HOM05D000243 ORTHO05D014555 2.9e-06 56.6 55 47.3
CARHR145080 Cardamine hirsuta HOM05D000243 ORTHO05D000278 3.8e-06 56.2 59 50.8
Duzib041G0345 Durio zibethinus HOM05D000243 ORTHO05D000278 3.8e-06 56.2 104 35.6
Duzib264G1097 Durio zibethinus HOM05D000243 ORTHO05D000278 3.8e-06 56.2 69 42.0
Glyma.17G002200 Glycine max HOM05D000243 ORTHO05D000278 3.8e-06 56.2 54 48.1
Pp3c19_20410 Physcomitrium patens HOM05D000243 ORTHO05D000278 3.8e-06 56.2 54 46.3
Actinidia35632 Actinidia chinensis HOM05D000243 ORTHO05D000278 5.0e-06 55.8 53 49.1
C05p12240 Brassica napus HOM05D000243 ORTHO05D000278 5.0e-06 55.8 54 46.3
ClCG10G008590 Citrullus lanatus HOM05D000243 ORTHO05D000278 5.0e-06 55.8 49 44.9
DCAR_001728 Daucus carota HOM05D000243 ORTHO05D000278 5.0e-06 55.8 54 50.0
HanXRQChr09g0269281 Helianthus annuus HOM05D000243 ORTHO05D000278 5.0e-06 55.8 70 37.1
Lalb_Chr12g0195881 Lupinus albus HOM05D000243 ORTHO05D000278 5.0e-06 55.8 66 42.4
Medtr8g069080 Medicago truncatula HOM05D000243 ORTHO05D000278 5.0e-06 55.8 172 27.9
Sabra07G0021100 Salix brachista HOM05D000243 ORTHO05D000278 5.0e-06 55.8 49 49.0
SGA_v2.0_scaffold276G46620 Striga asiatica HOM05D000243 ORTHO05D000278 5.0e-06 55.8 55 47.3
TWI56G0205 Tripterygium wilfordii HOM05D000243 ORTHO05D000278 5.0e-06 55.8 49 53.1
GSVIVG01023137001 Vitis vinifera HOM05D000243 ORTHO05D001390 5.0e-06 55.8 54 46.3
Atru.chr6.212 Acer truncatum HOM05D000243 ORTHO05D000278 6.5e-06 55.5 57 45.6
Aa31LG1G16600 Aethionema arabicum HOM05D000243 ORTHO05D000278 6.5e-06 55.5 59 42.4
BcaC03g17147 Brassica carinata HOM05D000243 ORTHO05D000278 6.5e-06 55.5 49 51.0
Phvul.003G091100 Phaseolus vulgaris HOM05D000243 ORTHO05D000278 6.5e-06 55.5 54 46.3
Potri.005G227900 Populus trichocarpa HOM05D000243 ORTHO05D000278 6.5e-06 55.5 49 53.1
PGR083G0202 Punica granatum HOM05D000243 ORTHO05D000278 6.5e-06 55.5 51 51.0
Sabra04G0082900 Salix brachista HOM05D000243 ORTHO05D000278 6.5e-06 55.5 54 46.3
Sabra05G0175800 Salix brachista HOM05D000243 ORTHO05D000278 6.5e-06 55.5 49 53.1
Sed0011244 Sechium edule HOM05D000243 ORTHO05D000278 6.5e-06 55.5 49 44.9
Sc07g0003240 Simmondsia chinensis HOM05D000243 ORTHO05D000278 6.5e-06 55.5 52 46.2
Thecc.01G146000 Theobroma cacao HOM05D000243 ORTHO05D000278 6.5e-06 55.5 54 46.3
unitig_899.g15520 Utricularia gibba HOM05D000243 ORTHO05D001390 6.5e-06 55.5 51 49.0
Actinidia22535 Actinidia chinensis HOM05D000243 ORTHO05D000278 8.5e-06 55.1 75 40.0
Actinidia26160 Actinidia chinensis HOM05D000243 ORTHO05D017228 8.5e-06 55.1 64 42.2
Glyma.07G271900 Glycine max HOM05D000243 ORTHO05D000278 8.5e-06 55.1 54 46.3
Glyma.08G281200 Glycine max HOM05D000243 ORTHO05D000278 8.5e-06 55.1 58 41.4
Gohir.A05G193200 Gossypium hirsutum HOM05D000243 ORTHO05D000278 8.5e-06 55.1 103 35.0
Gorai.009G201300 Gossypium raimondii HOM05D000243 ORTHO05D000278 8.5e-06 55.1 103 35.0
Medtr4g134580 Medicago truncatula HOM05D000243 ORTHO05D000278 8.5e-06 55.1 59 45.8
SGA_v2.0_scaffold92G28317 Striga asiatica HOM05D000243 ORTHO05D026197 8.5e-06 55.1 46 50.0
Thecc.08G028300 Theobroma cacao HOM05D000243 ORTHO05D000278 8.5e-06 55.1 104 34.6


User provided reference genes

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