Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400041565 Solanum tuberosum HOM05D008966 ORTHO05D011465 0.0e+00 1417.9 805 100.0
PGSC0003DMG400046597 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.6e-110 404.1 452 56.9
PGSC0003DMG400043098 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.3e-101 375.2 637 42.7
PGSC0003DMG400037872 Solanum tuberosum HOM05D008966 ORTHO05D011465 3.5e-83 313.9 386 52.6
PGSC0003DMG400038722 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.9e-77 293.5 328 54.6
PGSC0003DMG400042600 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.9e-76 291.6 263 62.4
PGSC0003DMG400042623 Solanum tuberosum HOM05D008966 ORTHO05D011465 5.6e-73 280.0 331 51.4
PGSC0003DMG400036048 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.2e-68 264.2 309 58.6
PGSC0003DMG400043989 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.3e-66 258.8 770 34.7
PGSC0003DMG400044128 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.0e-61 242.7 808 33.9
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-58 232.6 318 51.3
Sopen03g029130 Solanum pennellii HOM05D008663 ORTHO05D011127 9.7e-57 226.1 316 46.2
PGSC0003DMG400046009 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.6e-56 225.3 192 72.4
PGSC0003DMG400038425 Solanum tuberosum HOM05D008663 ORTHO05D017125 2.4e-55 221.5 821 32.0
PGSC0003DMG400041972 Solanum tuberosum HOM05D008663 ORTHO05D011127 9.0e-55 219.5 343 45.5
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 2.6e-54 218.0 305 49.5
PGSC0003DMG400038562 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.1e-52 212.6 245 62.0
PGSC0003DMG400040298 Solanum tuberosum HOM05D008663 ORTHO05D011127 9.4e-52 209.5 302 44.7
PGSC0003DMG400043117 Solanum tuberosum HOM05D008966 ORTHO05D000007 4.3e-49 200.7 366 41.8
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 2.2e-48 198.4 285 46.7
PGSC0003DMG400046328 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.1e-47 194.5 197 57.9
PGSC0003DMG400036686 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.6e-46 191.4 338 45.0
PGSC0003DMG400039526 Solanum tuberosum HOM05D008663 ORTHO05D396772 4.5e-46 190.7 882 29.3
PGSC0003DMG400043454 Solanum tuberosum HOM05D008966 ORTHO05D011465 3.8e-45 187.6 333 41.7
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 6.1e-43 180.3 315 44.4
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 6.7e-42 176.8 283 50.5
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 3.7e-40 171.0 258 45.3
PGSC0003DMG400040597 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.5e-38 165.6 166 54.8
PGSC0003DMG400042100 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.5e-38 164.1 197 60.9
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 6.5e-37 160.2 272 39.0
Sopen10g010590 Solanum pennellii HOM05D008663 ORTHO05D011127 4.2e-36 157.5 282 40.1
PGSC0003DMG400045205 Solanum tuberosum HOM05D008663 ORTHO05D017125 5.5e-36 157.1 790 28.4
PGSC0003DMG400040455 Solanum tuberosum HOM05D008966 ORTHO05D011465 7.2e-36 156.8 158 58.9
PGSC0003DMG400037287 Solanum tuberosum HOM05D008966 ORTHO05D011127 9.4e-36 156.4 209 53.6
PGSC0003DMG400047170 Solanum tuberosum HOM05D008966 ORTHO05D011465 9.4e-36 156.4 483 31.1
Sopen05g018060 Solanum pennellii HOM05D008663 ORTHO05D011127 2.7e-35 154.8 130 60.8
PGSC0003DMG400043408 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.7e-35 154.8 201 56.2
PGSC0003DMG400036497 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.8e-34 152.1 195 59.0
PGSC0003DMG400045462 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.0e-34 151.4 310 46.1
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 3.9e-34 151.0 295 42.7
PGSC0003DMG400038309 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.9e-34 151.0 223 43.9
Sopen05g017840 Solanum pennellii HOM05D008663 ORTHO05D011127 3.3e-33 147.9 147 51.7
Sopen09g014970 Solanum pennellii HOM05D008663 ORTHO05D011127 1.3e-32 146.0 132 56.8
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 2.2e-32 145.2 924 25.5
PGSC0003DMG400034390 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.8e-32 144.8 99 77.8
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-32 144.4 158 62.7
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 3.7e-32 144.4 258 40.7
Sopen11g007860 Solanum pennellii HOM05D008663 ORTHO05D011127 6.3e-32 143.7 138 63.0
PGSC0003DMG400041265 Solanum tuberosum HOM05D008663 ORTHO05D000007 1.3e-29 136.0 150 54.0
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-29 134.8 244 38.5
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-29 134.8 273 36.3
PGSC0003DMG400039575 Solanum tuberosum HOM05D008966 ORTHO05D011465 8.5e-29 133.3 165 50.9
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-28 132.9 140 50.0
PGSC0003DMG400043715 Solanum tuberosum HOM05D008966 ORTHO05D011465 7.2e-28 130.2 242 40.1
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 9.4e-28 129.8 170 47.1
Sopen10g007730 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-27 129.4 105 62.9
PGSC0003DMG400041929 Solanum tuberosum HOM05D008966 ORTHO05D011127 2.7e-27 128.3 123 60.2
Sopen05g017930 Solanum pennellii HOM05D008966 ORTHO05D023159 6.1e-27 127.1 681 27.8
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.8e-26 125.6 387 31.5
PGSC0003DMG400046732 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.2e-26 124.0 92 70.7
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 5.7e-25 120.6 785 26.8
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 9.7e-25 119.8 138 52.9
Sopen05g009430 Solanum pennellii HOM05D008663 ORTHO05D011127 1.3e-24 119.4 95 66.3
PGSC0003DMG400038877 Solanum tuberosum HOM05D012066 ORTHO05D011400 2.8e-24 118.2 310 35.2
PGSC0003DMG400038477 Solanum tuberosum HOM05D008966 ORTHO05D011465 3.7e-24 117.9 457 29.5
PGSC0003DMG400036171 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.8e-24 117.5 124 54.8
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 8.3e-24 116.7 285 31.9
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 1.8e-23 115.5 109 56.0
PGSC0003DMG400038706 Solanum tuberosum HOM05D012066 ORTHO05D395141 3.1e-23 114.8 706 25.9
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-22 112.8 90 62.2
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-22 111.3 93 62.4
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 4.5e-22 110.9 85 68.2
Sopen11g007980 Solanum pennellii HOM05D000014 ORTHO05D000016 1.0e-21 109.8 96 61.5
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-21 109.4 91 62.6
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-21 109.0 277 31.0
PGSC0003DMG400035296 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.1e-20 106.3 150 55.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-20 105.5 73 69.9
Sopen09g015040 Solanum pennellii HOM05D008663 ORTHO05D011127 5.5e-20 104.0 89 58.4
PGSC0003DMG400045084 Solanum tuberosum HOM05D008663 ORTHO05D011465 5.5e-20 104.0 164 41.5
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 7.2e-20 103.6 85 63.5
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.2e-19 102.8 478 27.8
PGSC0003DMG400036679 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.8e-18 99.0 730 26.7
PGSC0003DMG400045218 Solanum tuberosum HOM05D008966 ORTHO05D011127 1.8e-18 99.0 74 70.3
Sopen11g008070 Solanum pennellii HOM05D008966 ORTHO05D011127 3.0e-18 98.2 86 60.5
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 4.0e-18 97.8 78 67.9
PGSC0003DMG400046727 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.2e-18 97.4 76 61.8
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 6.8e-18 97.1 71 73.2
Sopen03g010890 Solanum pennellii HOM05D008663 ORTHO05D011127 1.2e-17 96.3 87 57.5
Sopen07g013600 Solanum pennellii HOM05D008966 ORTHO05D011127 1.5e-17 95.9 141 53.9
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 4.4e-17 94.4 121 55.4
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 4.4e-17 94.4 83 60.2
PGSC0003DMG400046069 Solanum tuberosum HOM05D008966 ORTHO05D011127 4.4e-17 94.4 236 33.5
Sopen03g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-17 94.0 67 70.1
PGSC0003DMG400039248 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.3e-16 92.8 304 31.9
PGSC0003DMG400040375 Solanum tuberosum HOM05D008663 ORTHO05D011465 1.3e-16 92.8 167 40.1
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.7e-16 92.4 323 30.3
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 6.3e-16 90.5 68 63.2
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 1.1e-15 89.7 168 37.5
PGSC0003DMG400044933 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.1e-15 89.7 149 40.9
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 1.4e-15 89.4 104 51.9
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.4e-15 89.4 299 31.1
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.8e-15 89.0 299 29.1
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-15 88.2 82 58.5
Sopen03g010960 Solanum pennellii HOM05D008966 ORTHO05D011127 5.4e-15 87.4 76 59.2
PGSC0003DMG400045302 Solanum tuberosum HOM05D008663 ORTHO05D011127 9.1e-15 86.7 103 48.5
PGSC0003DMG400035757 Solanum tuberosum HOM05D012066 ORTHO05D017133 1.2e-14 86.3 78 59.0
PGSC0003DMG400040891 Solanum tuberosum HOM05D008663 ORTHO05D011465 2.0e-14 85.5 165 36.4
PGSC0003DMG400041700 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.0e-14 85.5 121 46.3
Sopen09g018020 Solanum pennellii HOM05D012066 ORTHO05D023159 4.5e-14 84.3 96 47.9
Sopen05g028420 Solanum pennellii HOM05D008966 ORTHO05D011465 5.9e-14 84.0 153 39.2
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-13 83.2 95 47.4
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-13 82.4 267 28.8
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 2.3e-13 82.0 304 30.6
PGSC0003DMG400046319 Solanum tuberosum HOM05D008663 ORTHO05D011465 1.9e-12 79.0 394 24.4
PGSC0003DMG400037445 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.2e-11 76.3 97 47.4
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 4.7e-11 74.3 58 67.2
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 4.7e-11 74.3 58 67.2
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 6.1e-11 73.9 59 64.4
PGSC0003DMG400035909 Solanum tuberosum HOM05D012066 ORTHO05D011400 8.0e-11 73.6 404 25.5
PGSC0003DMG400042545 Solanum tuberosum HOM05D010285 ORTHO05D011400 8.0e-11 73.6 165 33.3
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-10 73.2 69 53.6
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 1.4e-10 72.8 164 32.3
PGSC0003DMG400035629 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.4e-10 72.8 146 39.7
Sopen03g010850 Solanum pennellii HOM05D008966 ORTHO05D011465 1.8e-10 72.4 80 51.2
PGSC0003DMG400044224 Solanum tuberosum HOM05D010285 ORTHO05D011400 3.0e-10 71.6 308 30.5
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.0e-10 71.6 95 44.2
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 4.0e-10 71.2 863 26.3
Sopen01g023880 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-10 70.9 137 36.5
Sopen03g012480 Solanum pennellii HOM05D000014 ORTHO05D000016 8.9e-10 70.1 78 51.3
PGSC0003DMG400041648 Solanum tuberosum HOM05D012066 ORTHO05D011127 8.9e-10 70.1 99 42.4
Sopen04g011840 Solanum pennellii HOM05D012066 ORTHO05D023159 2.0e-09 68.9 157 40.1
Sopen10g010410 Solanum pennellii HOM05D000070 ORTHO05D011127 3.4e-09 68.2 52 69.2
Sopen10g011010 Solanum pennellii HOM05D008966 ORTHO05D011465 3.4e-09 68.2 91 42.9
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 3.4e-09 68.2 75 52.0
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 5.7e-09 67.4 57 66.7
Sopen02g005190 Solanum pennellii HOM05D000004 ORTHO05D000004 7.5e-09 67.0 136 36.8
PGSC0003DMG400042391 Solanum tuberosum HOM05D010618 ORTHO05D011400 9.8e-09 66.6 491 25.5
PGSC0003DMG400036155 Solanum tuberosum HOM05D010285 ORTHO05D011400 1.3e-08 66.2 165 32.7
PGSC0003DMG400016754 Solanum tuberosum HOM05D047570 ORTHO05D011465 1.7e-08 65.9 284 33.8
PGSC0003DMG400040319 Solanum tuberosum HOM05D010285 ORTHO05D011400 1.7e-08 65.9 160 33.8
PGSC0003DMG400042817 Solanum tuberosum HOM05D010618 ORTHO05D017133 4.9e-08 64.3 97 44.3
PGSC0003DMG400035355 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.3e-08 63.5 155 41.9
Sopen05g020280 Solanum pennellii HOM05D008966 ORTHO05D023159 1.4e-07 62.8 165 43.0
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 1.8e-07 62.4 51 60.8
PGSC0003DMG400035324 Solanum tuberosum HOM05D010618 ORTHO05D011400 1.8e-07 62.4 282 29.4
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 2.4e-07 62.0 109 40.4
Sopen05g017810 Solanum pennellii HOM05D020245 ORTHO05D000007 3.2e-07 61.6 162 32.7
PGSC0003DMG400041584 Solanum tuberosum HOM05D008663 ORTHO05D398028 4.1e-07 61.2 196 26.5
PGSC0003DMG400036798 Solanum tuberosum HOM05D012066 ORTHO05D011400 5.4e-07 60.8 555 23.8
Sopen01g018810 Solanum pennellii HOM05D038065 ORTHO05D017125 7.0e-07 60.5 165 31.5
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 7.0e-07 60.5 42 73.8
PGSC0003DMG400036729 Solanum tuberosum HOM05D010618 ORTHO05D011465 9.2e-07 60.1 342 27.2
PGSC0003DMG400041142 Solanum tuberosum HOM05D010285 ORTHO05D011400 9.2e-07 60.1 131 33.6
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 1.6e-06 59.3 43 67.4
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 2.0e-06 58.9 52 61.5
PGSC0003DMG400043756 Solanum tuberosum HOM05D012066 ORTHO05D011400 2.0e-06 58.9 99 36.4
PGSC0003DMG400038758 Solanum tuberosum HOM05D062169 ORTHO05D011400 2.7e-06 58.5 120 34.2
PGSC0003DMG400039542 Solanum tuberosum HOM05D008663 ORTHO05D396104 2.7e-06 58.5 114 38.6


User provided reference genes

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