Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040298 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.1e-126 453.8 229 100.0
PGSC0003DMG400041565 Solanum tuberosum HOM05D008966 ORTHO05D011465 3.5e-52 209.1 302 44.7
PGSC0003DMG400043098 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.5e-42 176.4 338 36.4
PGSC0003DMG400038309 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.4e-37 159.8 171 53.8
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.6e-36 157.1 193 49.7
PGSC0003DMG400038562 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.6e-36 157.1 244 42.2
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 3.3e-34 149.4 187 48.7
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.2e-33 147.5 129 62.8
PGSC0003DMG400046732 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.1e-33 146.7 94 76.6
PGSC0003DMG400036048 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.1e-32 142.9 281 35.6
PGSC0003DMG400046069 Solanum tuberosum HOM05D008966 ORTHO05D011127 8.9e-32 141.4 130 58.5
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 6.4e-30 135.2 209 42.6
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 3.2e-29 132.9 244 38.1
PGSC0003DMG400035909 Solanum tuberosum HOM05D012066 ORTHO05D011400 4.1e-29 132.5 231 40.7
Sopen05g018060 Solanum pennellii HOM05D008663 ORTHO05D011127 5.4e-29 132.1 98 64.3
PGSC0003DMG400046009 Solanum tuberosum HOM05D008663 ORTHO05D011127 9.2e-29 131.3 95 68.4
PGSC0003DMG400041972 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.1e-28 130.2 376 31.4
PGSC0003DMG400038722 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.7e-28 129.8 300 33.7
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 3.9e-27 125.9 265 36.2
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.5e-26 124.0 218 39.0
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-26 122.1 338 33.1
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 7.3e-26 121.7 93 65.6
Sopen03g029130 Solanum pennellii HOM05D008663 ORTHO05D011127 1.1e-24 117.9 338 31.1
Sopen09g014970 Solanum pennellii HOM05D008663 ORTHO05D011127 1.8e-24 117.1 106 54.7
PGSC0003DMG400044128 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.3e-24 116.7 95 61.1
PGSC0003DMG400046328 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.0e-24 115.9 95 61.1
Sopen10g010590 Solanum pennellii HOM05D008663 ORTHO05D011127 8.9e-24 114.8 93 60.2
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 2.6e-23 113.2 311 32.5
Sopen05g009430 Solanum pennellii HOM05D008663 ORTHO05D011127 3.4e-23 112.8 86 62.8
PGSC0003DMG400045218 Solanum tuberosum HOM05D008966 ORTHO05D011127 7.6e-23 111.7 74 75.7
PGSC0003DMG400046727 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.9e-22 109.8 87 63.2
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-21 107.5 251 35.5
Sopen09g015040 Solanum pennellii HOM05D008663 ORTHO05D011127 7.1e-21 105.1 80 63.8
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 6.0e-20 102.1 83 62.7
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.0e-19 101.3 98 52.0
Sopen05g017840 Solanum pennellii HOM05D008663 ORTHO05D011127 5.1e-19 99.0 76 61.8
PGSC0003DMG400035757 Solanum tuberosum HOM05D012066 ORTHO05D017133 8.6e-19 98.2 218 40.4
Sopen10g007730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-18 96.7 79 63.3
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-18 96.7 84 57.1
Sopen11g007860 Solanum pennellii HOM05D008663 ORTHO05D011127 9.6e-18 94.7 69 65.2
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.2e-17 94.4 249 32.5
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-17 94.0 83 61.4
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 2.1e-17 93.6 134 42.5
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 3.6e-17 92.8 77 61.0
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 4.7e-17 92.4 89 56.2
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 4.7e-17 92.4 77 61.0
PGSC0003DMG400045462 Solanum tuberosum HOM05D008663 ORTHO05D017125 4.7e-17 92.4 70 65.7
PGSC0003DMG400043989 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.1e-16 91.3 78 60.3
PGSC0003DMG400038425 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.4e-16 90.9 98 52.0
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 3.1e-16 89.7 322 29.2
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 5.2e-16 89.0 80 58.8
PGSC0003DMG400035296 Solanum tuberosum HOM05D008663 ORTHO05D011127 6.8e-16 88.6 98 52.0
PGSC0003DMG400042100 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.9e-16 88.2 98 52.0
PGSC0003DMG400036798 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.2e-15 87.8 123 44.7
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-15 87.0 78 56.4
PGSC0003DMG400039526 Solanum tuberosum HOM05D008663 ORTHO05D396772 2.0e-15 87.0 87 56.3
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 3.4e-15 86.3 233 32.2
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-15 86.3 70 58.6
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-15 86.3 84 56.0
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 5.8e-15 85.5 56 71.4
PGSC0003DMG400043408 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.8e-15 85.5 98 51.0
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 1.3e-14 84.3 305 28.9
PGSC0003DMG400038877 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.3e-14 84.3 316 31.3
Sopen11g007980 Solanum pennellii HOM05D000014 ORTHO05D000016 1.7e-14 84.0 91 52.7
PGSC0003DMG400036497 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.7e-14 84.0 98 50.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.7e-14 84.0 298 27.5
Sopen11g008070 Solanum pennellii HOM05D008966 ORTHO05D011127 2.2e-14 83.6 73 58.9
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 2.2e-14 83.6 87 52.9
PGSC0003DMG400041265 Solanum tuberosum HOM05D008663 ORTHO05D000007 2.2e-14 83.6 100 49.0
PGSC0003DMG400035324 Solanum tuberosum HOM05D010618 ORTHO05D011400 2.9e-14 83.2 167 38.9
PGSC0003DMG400036171 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.8e-14 82.8 98 46.9
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.8e-14 82.8 269 29.4
PGSC0003DMG400036686 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.4e-14 81.6 98 49.0
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.4e-14 81.6 309 30.4
PGSC0003DMG400037287 Solanum tuberosum HOM05D008966 ORTHO05D011127 1.9e-13 80.5 79 54.4
Sopen03g010960 Solanum pennellii HOM05D008966 ORTHO05D011127 5.4e-13 79.0 76 52.6
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-13 78.6 151 37.7
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-12 77.8 303 26.4
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 1.2e-12 77.8 309 30.4
PGSC0003DMG400044933 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.2e-12 77.8 141 40.4
PGSC0003DMG400045205 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.2e-12 77.8 76 57.9
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 2.1e-12 77.0 59 64.4
PGSC0003DMG400041929 Solanum tuberosum HOM05D008966 ORTHO05D011127 2.7e-12 76.6 65 61.5
PGSC0003DMG400042391 Solanum tuberosum HOM05D010618 ORTHO05D011400 2.7e-12 76.6 188 33.5
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 4.6e-12 75.9 68 54.4
Sopen10g010400 Solanum pennellii HOM05D000155 ORTHO05D000022 6.0e-12 75.5 197 32.0
PGSC0003DMG400044224 Solanum tuberosum HOM05D010285 ORTHO05D011400 1.0e-11 74.7 207 34.8
Sopen07g013600 Solanum pennellii HOM05D008966 ORTHO05D011127 1.3e-11 74.3 69 52.2
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 1.3e-11 74.3 58 63.8
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-11 73.6 87 43.7
Sopen03g012480 Solanum pennellii HOM05D000014 ORTHO05D000016 2.3e-11 73.6 77 45.5
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 2.3e-11 73.6 245 30.6
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-11 73.6 107 44.9
Sopen09g018020 Solanum pennellii HOM05D012066 ORTHO05D023159 3.9e-11 72.8 132 42.4
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 6.6e-11 72.0 217 32.7
PGSC0003DMG400035629 Solanum tuberosum HOM05D012066 ORTHO05D011400 8.7e-11 71.6 135 40.0
Sopen03g010890 Solanum pennellii HOM05D008663 ORTHO05D011127 1.9e-10 70.5 63 50.8
PGSC0003DMG400038706 Solanum tuberosum HOM05D012066 ORTHO05D395141 3.3e-10 69.7 215 34.0
Sopen10g010410 Solanum pennellii HOM05D000070 ORTHO05D011127 4.3e-10 69.3 51 70.6
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 5.6e-10 68.9 159 35.2
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 9.6e-10 68.2 150 34.7
Sopen05g017930 Solanum pennellii HOM05D008966 ORTHO05D023159 9.6e-10 68.2 291 26.8
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 1.6e-09 67.4 75 50.7
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-09 67.4 79 49.4
Sopen03g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-09 67.0 57 59.6
PGSC0003DMG400041648 Solanum tuberosum HOM05D012066 ORTHO05D011127 3.6e-09 66.2 188 33.5
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 6.2e-09 65.5 43 76.7
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 8.1e-09 65.1 52 59.6
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-08 64.7 87 43.7
PGSC0003DMG400043756 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.1e-08 64.7 121 35.5
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 1.8e-08 63.9 212 30.2
PGSC0003DMG400035355 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.8e-08 63.9 85 49.4
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-08 63.2 58 58.6
PGSC0003DMG400043904 Solanum tuberosum HOM05D010285 ORTHO05D011400 4.0e-08 62.8 150 34.7
PGSC0003DMG400045302 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.0e-08 62.8 76 48.7
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 5.3e-08 62.4 43 65.1
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-07 61.2 117 37.6
PGSC0003DMG400041050 Solanum tuberosum HOM05D012066 ORTHO05D011400 1.2e-07 61.2 249 26.5
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 2.0e-07 60.5 145 35.9
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-07 60.1 303 26.1
Sopen04g011840 Solanum pennellii HOM05D012066 ORTHO05D023159 3.4e-07 59.7 126 38.9
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 5.8e-07 58.9 160 32.5
Sopen10g008910 Solanum pennellii HOM05D009384 ORTHO05D011633 7.6e-07 58.5 89 42.7
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 1.7e-06 57.4 150 34.0
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 1.7e-06 57.4 102 40.2
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.7e-06 57.4 143 35.0
Sopen05g012820 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 46 58.7


User provided reference genes

Program Settings