Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400039622 Solanum tuberosum HOM05D003027 ORTHO05D003455 2.4e-56 221.9 106 100.0
PGSC0003DMG400037194 Solanum tuberosum HOM05D003027 ORTHO05D003455 5.2e-35 151.0 90 82.2
PGSC0003DMG400039820 Solanum tuberosum HOM05D003027 ORTHO05D003455 2.9e-33 145.2 97 71.1
Sopen04g025360 Solanum pennellii HOM05D003027 ORTHO05D003455 5.0e-30 134.4 109 65.1
Sopen10g028950 Solanum pennellii HOM05D003027 ORTHO05D003455 1.1e-29 133.3 102 66.7
PGSC0003DMG400007175 Solanum tuberosum HOM05D003027 ORTHO05D003455 5.6e-29 131.0 102 64.7
PGSC0003DMG400042745 Solanum tuberosum HOM05D003027 ORTHO05D003455 5.6e-29 131.0 100 67.0
Solyc04g056460.2 Solanum lycopersicum HOM05D003027 ORTHO05D003455 4.7e-28 127.9 100 65.0
Sopen04g022330 Solanum pennellii HOM05D003027 ORTHO05D003455 2.6e-26 122.1 91 65.9
PGSC0003DMG400044487 Solanum tuberosum HOM05D003027 ORTHO05D003455 2.2e-25 119.0 91 65.9
Peaxi162Scf00003g05235 Petunia axillaris HOM05D003027 ORTHO05D003455 8.3e-25 117.1 93 62.4
Nitab4.5_0004697g0100 Nicotiana tabacum HOM05D003027 ORTHO05D003455 3.0e-22 108.6 101 59.4
CAN.G960.76 Capsicum annuum HOM05D003027 ORTHO05D003455 5.0e-22 107.8 96 59.4
Nitab4.5_0000123g0440 Nicotiana tabacum HOM05D003027 ORTHO05D003455 1.5e-21 106.3 101 57.4
PGSC0003DMG400044159 Solanum tuberosum HOM05D003027 ORTHO05D003455 2.1e-20 102.4 75 65.3
Nitab4.5_0000869g0140 Nicotiana tabacum HOM05D003027 ORTHO05D003455 8.1e-20 100.5 91 53.8
Peaxi162Scf00076g00222 Petunia axillaris HOM05D003027 ORTHO05D003455 8.1e-20 100.5 91 51.6
PGSC0003DMG400043705 Solanum tuberosum HOM05D003027 ORTHO05D003455 7.1e-16 87.4 65 66.2
CAN.G569.64 Capsicum annuum HOM05D003027 ORTHO05D003455 9.2e-16 87.0 91 48.4
Sopen04g022340 Solanum pennellii HOM05D003027 ORTHO05D003455 3.0e-14 82.0 84 56.0
Nitab4.5_0005963g0050 Nicotiana tabacum HOM05D003027 ORTHO05D003455 8.6e-14 80.5 91 46.2
MSTRG.6308 Avicennia marina HOM05D003027 ORTHO05D003455 1.6e-12 76.3 100 49.0
Sopen03g010280 Solanum pennellii HOM05D003027 ORTHO05D003455 2.8e-12 75.5 69 58.0
MSTRG.19782 Avicennia marina HOM05D003027 ORTHO05D003455 2.3e-11 72.4 92 44.6
Oeu022988.1 Olea europaea HOM05D003027 ORTHO05D003455 2.3e-11 72.4 94 50.0
Ciclev10011169m.g Citrus clementina HOM05D003027 ORTHO05D003455 3.1e-11 72.0 97 43.3
Sabra16G0035700 Salix brachista HOM05D003027 ORTHO05D003455 8.9e-11 70.5 98 41.8
TWI74G0015 Tripterygium wilfordii HOM05D003027 ORTHO05D003455 8.9e-11 70.5 106 38.7
Sabra06G0023000 Salix brachista HOM05D003027 ORTHO05D003455 1.2e-10 70.1 98 41.8
TAR623G0586 Trochodendron aralioides HOM05D003027 ORTHO05D003455 2.0e-10 69.3 106 42.5
Duzib128G0339 Durio zibethinus HOM05D003027 ORTHO05D003455 2.6e-10 68.9 103 42.7
Eucgr.A02199 Eucalyptus grandis HOM05D003027 ORTHO05D003455 4.4e-10 68.2 96 42.7
CSS0031087 Camellia sinensis var. sinensis HOM05D003027 ORTHO05D003455 5.8e-10 67.8 110 43.6
TWI53G2142 Tripterygium wilfordii HOM05D003027 ORTHO05D003455 5.8e-10 67.8 106 38.7
COL.COLO4_26642 Corchorus olitorius HOM05D003027 ORTHO05D003455 7.6e-10 67.4 90 41.1
Oeu044242.3 Olea europaea HOM05D003027 ORTHO05D003455 7.6e-10 67.4 91 45.1
Potri.006G034500 Populus trichocarpa HOM05D003027 ORTHO05D003455 7.6e-10 67.4 99 41.4
Thecc.05G123000 Theobroma cacao HOM05D003027 ORTHO05D003455 9.9e-10 67.0 94 41.5
CSS0006760 Camellia sinensis var. sinensis HOM05D003027 ORTHO05D003455 1.3e-09 66.6 100 42.0
CSS0013065 Camellia sinensis var. sinensis HOM05D003027 ORTHO05D003455 1.3e-09 66.6 100 42.0
SalBow1G6916 Salvia bowleyana HOM05D003027 ORTHO05D003455 1.3e-09 66.6 93 44.1
CiPaw.09G050600 Carya illinoinensis HOM05D003027 ORTHO05D003455 1.7e-09 66.2 105 41.0
Potri.016G032400 Populus trichocarpa HOM05D003027 ORTHO05D003455 1.7e-09 66.2 104 41.3
Sopen04g025410 Solanum pennellii HOM05D003027 ORTHO05D003455 2.2e-09 65.9 43 72.1
MSTRG.26171 Avicennia marina HOM05D003027 ORTHO05D003455 2.9e-09 65.5 99 44.4
Cc06_g20180 Coffea canephora HOM05D003027 ORTHO05D003455 2.9e-09 65.5 96 37.5
SalBow6G5171 Salvia bowleyana HOM05D003027 ORTHO05D003455 2.9e-09 65.5 93 47.3
COL.COLO4_19389 Corchorus olitorius HOM05D003027 ORTHO05D003455 4.9e-09 64.7 95 43.2
Gohir.A13G001500 Gossypium hirsutum HOM05D003027 ORTHO05D003455 6.4e-09 64.3 97 42.3
Lj1A1084T71 Lonicera japonica HOM05D003027 ORTHO05D003455 6.4e-09 64.3 97 42.3
Dinv20764 Davidia involucrata HOM05D003027 ORTHO05D003455 8.4e-09 63.9 109 39.4
PGR042G3138 Punica granatum HOM05D003027 ORTHO05D003455 8.4e-09 63.9 90 42.2
Dinv36122 Davidia involucrata HOM05D003027 ORTHO05D003455 1.1e-08 63.5 103 41.7
arahy.Tifrunner.gnm1.ann1.1QMW5J Arachis hypogaea HOM05D003027 ORTHO05D003455 1.4e-08 63.2 95 40.0
arahy.Tifrunner.gnm1.ann1.470EJV Arachis hypogaea HOM05D003027 ORTHO05D003455 1.4e-08 63.2 95 40.0
Sc25g0005470 Simmondsia chinensis HOM05D003027 ORTHO05D003455 1.4e-08 63.2 88 44.3
TWI77G0499 Tripterygium wilfordii HOM05D003027 ORTHO05D003455 1.4e-08 63.2 105 39.0
Cfa019972 Carpinus fangiana HOM05D003027 ORTHO05D003455 1.9e-08 62.8 105 37.1
Migut.J01624 Erythranthe guttata HOM05D003027 ORTHO05D003455 1.9e-08 62.8 98 41.8
Atru.chr1.1410 Acer truncatum HOM05D003027 ORTHO05D003455 2.4e-08 62.4 93 39.8
Duzib106G1517 Durio zibethinus HOM05D003027 ORTHO05D003455 3.2e-08 62.0 94 39.4
Migut.K00152 Erythranthe guttata HOM05D003027 ORTHO05D003455 4.1e-08 61.6 95 43.2
Gorai.013G000800 Gossypium raimondii HOM05D003027 ORTHO05D003455 4.1e-08 61.6 97 41.2
unitig_744.g24169 Utricularia gibba HOM05D003027 ORTHO05D003455 4.1e-08 61.6 90 41.1
Haze_20266 Corylus avellana HOM05D003027 ORTHO05D003455 5.4e-08 61.2 105 38.1
DCAR_013537 Daucus carota HOM05D003027 ORTHO05D003455 7.1e-08 60.8 91 40.7
THA.LOC104816495 Tarenaya hassleriana HOM05D003027 ORTHO05D003455 7.1e-08 60.8 97 39.2
DCAR_020597 Daucus carota HOM05D003027 ORTHO05D003455 1.2e-07 60.1 100 39.0
Lj2A408G49 Lonicera japonica HOM05D003027 ORTHO05D003455 1.2e-07 60.1 108 39.8
Actinidia17700 Actinidia chinensis HOM05D003027 ORTHO05D003455 1.6e-07 59.7 91 38.5
Carub.0004s2327 Capsella rubella HOM05D003027 ORTHO05D003455 2.1e-07 59.3 93 39.8
Glyma.03G123200 Glycine max HOM05D003027 ORTHO05D003455 2.1e-07 59.3 95 34.7
CDE08G1650 Ceratophyllum demersum HOM05D003027 ORTHO05D003455 3.5e-07 58.5 103 34.0
Medtr7g088890 Medicago truncatula HOM05D003027 ORTHO05D003455 6.0e-07 57.8 95 38.9
AT2G40950 Arabidopsis thaliana HOM05D003027 ORTHO05D003455 7.8e-07 57.4 93 36.6
TAR636G3275 Trochodendron aralioides HOM05D003027 ORTHO05D003455 7.8e-07 57.4 95 41.1
unitig_21.g20679 Utricularia gibba HOM05D003027 ORTHO05D003455 1.0e-06 57.0 91 41.8
AT3G10800 Arabidopsis thaliana HOM05D003027 ORTHO05D003455 1.3e-06 56.6 100 39.0
Glyma.19G126800 Glycine max HOM05D003027 ORTHO05D003455 1.3e-06 56.6 96 37.5
AL4G38920 Arabidopsis lyrata HOM05D003027 ORTHO05D003455 1.7e-06 56.2 93 36.6
CDE08G0069 Ceratophyllum demersum HOM05D003027 ORTHO05D003455 1.7e-06 56.2 103 35.0
Phvul.001G119300 Phaseolus vulgaris HOM05D003027 ORTHO05D003455 1.7e-06 56.2 94 35.1
HanXRQChr03g0061511 Helianthus annuus HOM05D003027 ORTHO05D003455 2.3e-06 55.8 95 35.8
SGA_v2.0_scaffold69G23173 Striga asiatica HOM05D003027 ORTHO05D003455 2.3e-06 55.8 95 37.9
TPR.G22687 Trifolium pratense HOM05D003027 ORTHO05D003455 2.3e-06 55.8 94 37.2
THA.LOC104824380 Tarenaya hassleriana HOM05D003027 ORTHO05D003455 3.9e-06 55.1 99 35.4
GSVIVG01025788001 Vitis vinifera HOM05D003027 ORTHO05D003455 3.9e-06 55.1 90 36.7
CARHR136060 Cardamine hirsuta HOM05D003027 ORTHO05D003455 5.1e-06 54.7 91 36.3
CiPaw.10G042900 Carya illinoinensis HOM05D003027 ORTHO05D003455 5.1e-06 54.7 107 34.6
Hund24551 Selenicereus undatus HOM05D003027 ORTHO05D003455 8.6e-06 53.9 88 42.0
VMungo1383G0888 Vigna mungo HOM05D003027 ORTHO05D003455 8.6e-06 53.9 97 36.1


User provided reference genes

Program Settings