Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038309 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.0e-84 315.8 174 100.0
PGSC0003DMG400040298 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.1e-37 160.6 171 53.8
PGSC0003DMG400038562 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.4e-37 159.5 223 52.5
PGSC0003DMG400041565 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.0e-35 154.1 223 43.9
PGSC0003DMG400043098 Solanum tuberosum HOM05D008966 ORTHO05D011465 4.1e-29 132.1 227 43.6
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 1.3e-27 127.1 171 45.6
PGSC0003DMG400036048 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.3e-24 116.3 242 36.8
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.2e-23 114.0 213 35.7
Sopen11g007860 Solanum pennellii HOM05D008663 ORTHO05D011127 2.6e-23 112.8 97 57.7
PGSC0003DMG400038722 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.3e-22 110.5 239 37.2
PGSC0003DMG400046732 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.2e-22 109.8 72 73.6
Sopen10g007730 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-22 108.6 96 58.3
Sopen05g017840 Solanum pennellii HOM05D008663 ORTHO05D011127 7.0e-21 104.8 95 54.7
PGSC0003DMG400045218 Solanum tuberosum HOM05D008966 ORTHO05D011127 9.2e-21 104.4 72 69.4
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 1.2e-20 104.0 211 36.0
PGSC0003DMG400046009 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.0e-20 103.2 98 60.2
PGSC0003DMG400046069 Solanum tuberosum HOM05D008966 ORTHO05D011127 2.0e-20 103.2 171 42.7
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-20 102.4 218 36.7
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 4.5e-20 102.1 177 46.3
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-19 99.4 212 38.7
Sopen10g010590 Solanum pennellii HOM05D008663 ORTHO05D011127 1.5e-18 97.1 95 50.5
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 2.5e-18 96.3 170 38.8
PGSC0003DMG400044128 Solanum tuberosum HOM05D008966 ORTHO05D011465 9.5e-18 94.4 85 58.8
Sopen09g015040 Solanum pennellii HOM05D008663 ORTHO05D011127 1.2e-17 94.0 70 65.7
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 2.1e-17 93.2 218 35.8
PGSC0003DMG400043989 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.1e-17 93.2 89 55.1
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 3.6e-17 92.4 216 38.0
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 3.6e-17 92.4 74 62.2
PGSC0003DMG400046328 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.6e-17 92.4 145 42.8
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 6.1e-17 91.7 83 56.6
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 6.1e-17 91.7 85 54.1
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 8.0e-17 91.3 170 35.3
Sopen03g029130 Solanum pennellii HOM05D008663 ORTHO05D011127 8.0e-17 91.3 211 31.3
PGSC0003DMG400041972 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.0e-17 91.3 275 31.6
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-16 90.9 88 51.1
Sopen11g007980 Solanum pennellii HOM05D000014 ORTHO05D000016 6.8e-16 88.2 84 54.8
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 6.8e-16 88.2 209 36.4
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-15 86.3 68 64.7
Sopen09g014970 Solanum pennellii HOM05D008663 ORTHO05D011127 2.6e-15 86.3 70 60.0
Sopen11g008070 Solanum pennellii HOM05D008966 ORTHO05D011127 2.2e-14 83.2 71 59.2
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 2.9e-14 82.8 170 32.4
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-14 81.6 88 50.0
Sopen05g018060 Solanum pennellii HOM05D008663 ORTHO05D011127 8.3e-14 81.3 150 36.0
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-13 80.9 67 59.7
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-13 80.5 95 42.1
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-13 79.7 200 37.5
PGSC0003DMG400037287 Solanum tuberosum HOM05D008966 ORTHO05D011127 4.1e-13 79.0 177 42.9
PGSC0003DMG400042100 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.6e-12 77.0 86 54.7
PGSC0003DMG400038425 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.5e-12 75.9 86 51.2
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 6.0e-12 75.1 69 53.6
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 6.0e-12 75.1 84 51.2
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 7.8e-12 74.7 204 33.3
PGSC0003DMG400045302 Solanum tuberosum HOM05D008663 ORTHO05D011127 7.8e-12 74.7 88 48.9
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-11 73.6 203 29.6
PGSC0003DMG400043408 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.7e-11 73.6 93 51.6
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-11 73.2 62 59.7
PGSC0003DMG400036686 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.3e-11 73.2 209 37.3
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 5.0e-11 72.0 68 52.9
Sopen07g013600 Solanum pennellii HOM05D008966 ORTHO05D011127 8.6e-11 71.2 75 44.0
PGSC0003DMG400035296 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.6e-11 71.2 86 51.2
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 1.5e-10 70.5 61 55.7
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 1.9e-10 70.1 42 76.2
Sopen05g009430 Solanum pennellii HOM05D008663 ORTHO05D011127 3.3e-10 69.3 59 55.9
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 3.3e-10 69.3 54 63.0
PGSC0003DMG400036497 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.3e-10 69.3 86 50.0
PGSC0003DMG400041265 Solanum tuberosum HOM05D008663 ORTHO05D000007 3.3e-10 69.3 86 51.2
Sopen03g012480 Solanum pennellii HOM05D000014 ORTHO05D000016 5.6e-10 68.6 70 52.9
Sopen03g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-10 68.2 67 50.7
PGSC0003DMG400045462 Solanum tuberosum HOM05D008663 ORTHO05D017125 9.5e-10 67.8 88 47.7
PGSC0003DMG400039526 Solanum tuberosum HOM05D008663 ORTHO05D396772 8.0e-09 64.7 91 46.2
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.1e-08 64.3 153 33.3
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 1.4e-08 63.9 57 57.9
Sopen05g017930 Solanum pennellii HOM05D008966 ORTHO05D023159 2.3e-08 63.2 201 34.3
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 8.9e-08 61.2 53 58.5
Sopen03g010960 Solanum pennellii HOM05D008966 ORTHO05D011127 1.2e-07 60.8 65 46.2
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.2e-07 60.8 170 40.0
PGSC0003DMG400041929 Solanum tuberosum HOM05D008966 ORTHO05D011127 2.0e-07 60.1 60 58.3
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-07 59.7 64 46.9
PGSC0003DMG400036171 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.8e-07 58.5 75 48.0
PGSC0003DMG400045205 Solanum tuberosum HOM05D008663 ORTHO05D017125 5.8e-07 58.5 198 33.8
PGSC0003DMG400046727 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.8e-07 58.5 48 62.5
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.5e-07 58.2 43 72.1
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 2.2e-06 56.6 58 51.7
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-06 56.2 45 57.8
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 3.7e-06 55.8 58 56.9
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 3.7e-06 55.8 50 62.0
PGSC0003DMG400038706 Solanum tuberosum HOM05D012066 ORTHO05D395141 3.7e-06 55.8 171 37.4
PGSC0003DMG400036679 Solanum tuberosum HOM05D008663 ORTHO05D017125 8.3e-06 54.7 182 37.9
PGSC0003DMG400038877 Solanum tuberosum HOM05D012066 ORTHO05D011400 8.3e-06 54.7 200 31.5


User provided reference genes

Program Settings