Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.1e-81 305.1 153 100.0
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.1e-65 250.4 146 87.7
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.0e-63 246.9 146 86.3
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.4e-57 225.7 126 90.5
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.2e-54 214.9 153 73.2
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 1.4e-52 209.9 146 73.3
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-51 206.5 146 71.9
Solyc05g017797.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.0e-51 206.1 146 71.2
Solyc01g066616.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.9e-46 189.5 132 72.7
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-34 149.8 139 56.1
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 2.0e-32 142.9 146 51.4
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 2.0e-32 142.9 148 52.7
PGSC0003DMG400041066 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.5e-32 142.1 102 71.6
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.8e-32 141.0 98 77.6
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 4.3e-30 135.2 146 55.5
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.1e-29 132.9 92 73.9
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.8e-27 124.0 86 76.7
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-24 114.4 93 65.6
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-18 96.3 140 39.3
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 3.7e-18 95.5 140 39.3
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-16 89.7 145 35.2
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.0e-16 88.2 139 35.3
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.6e-15 84.3 144 33.3
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.6e-15 84.3 126 34.9
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.6e-14 81.6 100 49.0
Solyc12g042110.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 5.6e-14 81.6 106 44.3
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 2.1e-13 79.7 147 32.0
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-13 79.3 127 38.6
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.7e-13 78.6 123 35.8
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.7e-13 78.6 142 33.1
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.2e-13 78.2 133 36.1
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.1e-13 77.8 54 64.8
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 1.1e-12 77.4 141 39.7
Sopen12g016550 Solanum pennellii HOM05D002261 ORTHO05D002334 2.3e-12 76.3 78 56.4
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-12 75.1 123 32.5
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 5.2e-12 75.1 56 60.7
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.8e-12 74.7 146 36.3
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-11 72.4 125 38.4
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 4.4e-11 72.0 110 40.0
Sopen03g024550 Solanum pennellii HOM05D002261 ORTHO05D002334 7.6e-11 71.2 52 67.3
Nitab4.5_0000570g0170 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.9e-11 70.9 144 34.7
PGSC0003DMG400030801 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.9e-10 69.3 42 71.4
Sopen10g020420 Solanum pennellii HOM05D002261 ORTHO05D002334 6.4e-10 68.2 59 67.8
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 4.1e-09 65.5 34 85.3
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 4.1e-09 65.5 66 57.6
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-09 65.5 146 30.8
PGSC0003DMG400033635 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.4e-09 65.1 40 75.0
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 9.2e-09 64.3 85 42.4
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-08 63.5 124 33.9
Nitab4.5_0000091g0370 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-08 62.0 123 31.7
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 7.8e-08 61.2 121 30.6
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 1.0e-07 60.8 144 27.8
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-07 60.8 139 33.8
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.7e-07 60.1 139 27.3
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.0e-07 59.3 93 45.2
CANSAT01G2441 Cannabis sativa HOM05D009267 ORTHO05D010384 3.9e-07 58.9 146 26.7
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-07 58.9 85 38.8
Nitab4.5_0014440g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-07 58.9 50 64.0
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 3.9e-07 58.9 139 25.9
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.1e-07 58.5 145 26.2
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 1.5e-06 57.0 138 26.1
Nitab4.5_0001879g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-06 56.6 97 35.1
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 2.5e-06 56.2 27 88.9
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-06 55.8 90 40.0
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-06 55.8 90 40.0
Peaxi162Scf00752g00055 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-06 55.8 49 51.0
Peaxi162Scf00752g00068 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-06 55.8 49 51.0
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-06 55.5 87 35.6
Peaxi162Scf00044g00014 Petunia axillaris HOM05D002261 ORTHO05D002334 4.3e-06 55.5 86 39.5
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 9.6e-06 54.3 138 29.7


User provided reference genes

Program Settings