Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400032241 Solanum tuberosum HOM05D003415 ORTHO05D001594 2.8e-100 368.6 187 100.0
Solyc09g082490.4 Solanum lycopersicum HOM05D003415 ORTHO05D001594 1.6e-84 316.2 164 97.0
Sopen09g031350 Solanum pennellii HOM05D003415 ORTHO05D001594 3.7e-84 315.1 164 96.3
CAN.G1402.7 Capsicum annuum HOM05D003415 ORTHO05D001594 1.1e-75 287.0 176 84.1
Peaxi162Scf00520g00078 Petunia axillaris HOM05D003415 ORTHO05D001594 7.9e-71 270.8 158 84.8
Nitab4.5_0002406g0020 Nicotiana tabacum HOM05D003415 ORTHO05D001594 1.8e-67 259.6 157 82.8
Nitab4.5_0000085g0290 Nicotiana tabacum HOM05D003415 ORTHO05D001594 1.5e-66 256.5 157 81.5
Hma1.2p1_0226F.1_g095560 Hydrangea macrophylla HOM05D003415 ORTHO05D001594 1.1e-40 170.6 165 54.5
Cc03_g04120 Coffea canephora HOM05D003415 ORTHO05D001594 4.7e-39 165.2 168 52.4
CSS0028538 Camellia sinensis var. sinensis HOM05D003415 ORTHO05D001594 3.0e-38 162.5 166 52.4
MD10G1161800 Malus domestica HOM05D003415 ORTHO05D001594 1.8e-35 153.3 169 48.5
Dinv19191 Davidia involucrata HOM05D003415 ORTHO05D001594 2.4e-35 152.9 166 53.6
Prupe.8G201300 Prunus persica HOM05D003415 ORTHO05D001594 4.1e-35 152.1 169 49.1
Atru.chr9.2214 Acer truncatum HOM05D003415 ORTHO05D001594 7.0e-35 151.4 163 46.6
Actinidia09476 Actinidia chinensis HOM05D003415 ORTHO05D001594 2.0e-34 149.8 168 49.4
Lj2A1128G42 Lonicera japonica HOM05D003415 ORTHO05D001594 1.0e-33 147.5 131 57.3
SalBow3G1406 Salvia bowleyana HOM05D003415 ORTHO05D001594 1.7e-33 146.7 168 48.2
MSTRG.24730 Avicennia marina HOM05D003415 ORTHO05D001594 2.3e-33 146.4 169 47.9
CiPaw.04G104600 Carya illinoinensis HOM05D003415 ORTHO05D001594 3.0e-33 146.0 170 49.4
MD05G1173900 Malus domestica HOM05D003415 ORTHO05D001594 3.9e-33 145.6 160 50.0
Atru.chr1.3187 Acer truncatum HOM05D003415 ORTHO05D001594 8.6e-33 144.4 143 51.0
Oeu053312.2 Olea europaea HOM05D003415 ORTHO05D001594 1.9e-32 143.3 163 49.1
Rhsim01G0255100 Rhododendron simsii HOM05D003415 ORTHO05D001594 1.9e-32 143.3 178 48.3
Actinidia30068 Actinidia chinensis HOM05D003415 ORTHO05D001594 2.5e-32 142.9 169 46.7
MSTRG.9963 Avicennia marina HOM05D003415 ORTHO05D001594 7.3e-32 141.4 170 47.1
Oeu058965.1 Olea europaea HOM05D003415 ORTHO05D001594 7.3e-32 141.4 162 49.4
Thecc.01G224000 Theobroma cacao HOM05D003415 ORTHO05D001594 9.5e-32 141.0 169 46.7
CSS0043801 Camellia sinensis var. sinensis HOM05D003415 ORTHO05D001594 1.6e-31 140.2 167 47.3
Duzib133G1316 Durio zibethinus HOM05D003415 ORTHO05D001594 2.1e-31 139.8 169 46.2
Nn1g07918 Nelumbo nucifera HOM05D003415 ORTHO05D001594 3.6e-31 139.0 167 45.5
FAN24G0460 Fragaria x ananassa HOM05D003415 ORTHO05D001594 4.7e-31 138.7 166 47.6
Actinidia23718 Actinidia chinensis HOM05D003415 ORTHO05D001594 6.2e-31 138.3 168 48.2
RcHm_v2.0_Chr6g0284531 Rosa chinensis HOM05D003415 ORTHO05D001594 6.2e-31 138.3 174 46.6
SGA_v2.0_scaffold165G38284 Striga asiatica HOM05D003415 ORTHO05D001594 6.2e-31 138.3 169 45.6
TAR636G3032 Trochodendron aralioides HOM05D003415 ORTHO05D001594 8.0e-31 137.9 168 48.2
Oeu042810.1 Olea europaea HOM05D003415 ORTHO05D001594 1.0e-30 137.5 162 47.5
Duzib138G0574 Durio zibethinus HOM05D003415 ORTHO05D001594 2.3e-30 136.3 172 44.2
MSTRG.21867 Avicennia marina HOM05D003415 ORTHO05D001594 3.1e-30 136.0 169 46.7
Duzib211G0076 Durio zibethinus HOM05D003415 ORTHO05D001594 3.1e-30 136.0 165 47.3
QL05p058688 Quercus lobata HOM05D003415 ORTHO05D001594 4.0e-30 135.6 169 48.5
TWI75G1556 Tripterygium wilfordii HOM05D003415 ORTHO05D001594 5.2e-30 135.2 160 47.5
QL09p053183 Quercus lobata HOM05D003415 ORTHO05D001594 6.8e-30 134.8 169 48.5
Migut.G00369 Erythranthe guttata HOM05D003415 ORTHO05D001594 1.2e-29 134.0 167 45.5
vmacro14746 Vaccinium macrocarpon HOM05D003415 ORTHO05D001594 1.2e-29 134.0 191 43.5
FvH4_2g18790 Fragaria vesca HOM05D003415 ORTHO05D001594 1.5e-29 133.7 171 46.8
Manes.12G046200 Manihot esculenta HOM05D003415 ORTHO05D001594 1.5e-29 133.7 173 46.2
FAN27G2123 Fragaria x ananassa HOM05D003415 ORTHO05D001594 2.0e-29 133.3 171 46.8
Manes.13G046900 Manihot esculenta HOM05D003415 ORTHO05D001594 2.0e-29 133.3 161 49.7
CANSAT01G2234 Cannabis sativa HOM05D003415 ORTHO05D001594 2.6e-29 132.9 167 46.7
Oeu042809.1 Olea europaea HOM05D003415 ORTHO05D001594 2.6e-29 132.9 162 47.5
Cpa.g.sc8.139 Carica papaya HOM05D003415 ORTHO05D001594 4.4e-29 132.1 141 52.5
CiPaw.03G148100 Carya illinoinensis HOM05D003415 ORTHO05D001594 1.7e-28 130.2 159 49.1
Ciclev10028898m.g Citrus clementina HOM05D003415 ORTHO05D001594 2.2e-28 129.8 131 50.4
SGA_v2.0_scaffold79G25582 Striga asiatica HOM05D003415 ORTHO05D001594 2.2e-28 129.8 169 43.8
FAN15G3328 Fragaria x ananassa HOM05D003415 ORTHO05D001594 2.9e-28 129.4 168 46.4
MELO3C024046.2 Cucumis melo HOM05D003415 ORTHO05D001594 4.9e-28 128.6 165 43.6
Gohir.A07G200600 Gossypium hirsutum HOM05D003415 ORTHO05D001594 1.4e-27 127.1 170 42.4
Gohir.D07G206900 Gossypium hirsutum HOM05D003415 ORTHO05D001594 1.4e-27 127.1 170 42.4
Gorai.001G233300 Gossypium raimondii HOM05D003415 ORTHO05D001594 1.4e-27 127.1 170 42.4
Nn3g20001 Nelumbo nucifera HOM05D003415 ORTHO05D001594 1.9e-27 126.7 162 45.7
TWI18G0281 Tripterygium wilfordii HOM05D003415 ORTHO05D001594 3.2e-27 125.9 182 40.7
MSTRG.4050 Avicennia marina HOM05D003415 ORTHO05D001594 7.0e-27 124.8 169 45.0
CsaV3_3G029960 Cucumis sativus L. HOM05D003415 ORTHO05D001594 9.2e-27 124.4 165 41.8
TWI60G1308 Tripterygium wilfordii HOM05D003415 ORTHO05D001594 1.6e-26 123.6 130 46.9
Cc01_g16890 Coffea canephora HOM05D003415 ORTHO05D001594 2.0e-26 123.2 163 41.7
HanXRQChr01g0015201 Helianthus annuus HOM05D003415 ORTHO05D001594 2.0e-26 123.2 168 46.4
Solyc06g083410.4 Solanum lycopersicum HOM05D003415 ORTHO05D001594 2.7e-26 122.9 175 39.4
TWI81G0623 Tripterygium wilfordii HOM05D003415 ORTHO05D001594 4.6e-26 122.1 148 43.9
Sabra02G0185700 Salix brachista HOM05D003415 ORTHO05D001594 1.3e-25 120.6 180 42.8
Manes.13G046800 Manihot esculenta HOM05D003415 ORTHO05D001594 1.7e-25 120.2 161 46.0
ECA248G2219 Erigeron canadensis HOM05D003415 ORTHO05D001594 2.3e-25 119.8 163 44.2
Sopen06g034770 Solanum pennellii HOM05D003415 ORTHO05D001594 2.3e-25 119.8 175 38.9
Gohir.D07G163800 Gossypium hirsutum HOM05D003415 ORTHO05D001594 3.9e-25 119.0 169 42.6
Peaxi162Scf00517g00628 Petunia axillaris HOM05D003415 ORTHO05D001594 6.6e-25 118.2 175 38.9
Potri.002G244000 Populus trichocarpa HOM05D003415 ORTHO05D001594 8.6e-25 117.9 169 43.8
Gorai.001G187500 Gossypium raimondii HOM05D003415 ORTHO05D001594 1.1e-24 117.5 171 40.9
HanXRQChr10g0279401 Helianthus annuus HOM05D003415 ORTHO05D001594 1.5e-24 117.1 168 43.5
PGSC0003DMG400020162 Solanum tuberosum HOM05D003415 ORTHO05D001594 1.9e-24 116.7 175 38.3
Gohir.D08G212628 Gossypium hirsutum HOM05D003415 ORTHO05D001594 3.3e-24 115.9 169 41.4
TPR.G14528 Trifolium pratense HOM05D003415 ORTHO05D001594 3.3e-24 115.9 169 43.8
Ciclev10021149m.g Citrus clementina HOM05D003415 ORTHO05D001594 5.6e-24 115.2 170 40.6
DCAR_004730 Daucus carota HOM05D003415 ORTHO05D001594 9.5e-24 114.4 160 41.9
Gorai.004G226300 Gossypium raimondii HOM05D003415 ORTHO05D001594 9.5e-24 114.4 160 43.1
Sed0000990 Sechium edule HOM05D003415 ORTHO05D001594 9.5e-24 114.4 162 40.7
Gohir.A08G195150 Gossypium hirsutum HOM05D003415 ORTHO05D001594 1.2e-23 114.0 160 41.9
Lalb_Chr12g0209961 Lupinus albus HOM05D003415 ORTHO05D001594 1.2e-23 114.0 155 44.5
Gohir.A07G157400 Gossypium hirsutum HOM05D003415 ORTHO05D001594 1.6e-23 113.6 174 40.2
Lsat_1_v5_gn_5_180561 Lactuca sativa HOM05D003415 ORTHO05D001594 1.6e-23 113.6 163 42.3
Sed0004220 Sechium edule HOM05D003415 ORTHO05D001594 1.6e-23 113.6 162 40.7
BraA09t36096Z Brassica rapa HOM05D003415 ORTHO05D001594 6.2e-23 111.7 163 43.6
Nitab4.5_0012390g0020 Nicotiana tabacum HOM05D003415 ORTHO05D001594 6.2e-23 111.7 191 37.2
unitig_748.g7299 Utricularia gibba HOM05D003415 ORTHO05D001594 8.1e-23 111.3 166 39.8
AT5G48720 Arabidopsis thaliana HOM05D003415 ORTHO05D001594 1.1e-22 110.9 165 41.8
BolC9t53420H Brassica oleracea HOM05D003415 ORTHO05D001594 1.1e-22 110.9 159 42.8
Eucgr.H00791 Eucalyptus grandis HOM05D003415 ORTHO05D001594 1.1e-22 110.9 157 45.2
Potri.014G190000 Populus trichocarpa HOM05D003415 ORTHO05D001594 1.4e-22 110.5 167 43.1
C09p04920 Brassica napus HOM05D003415 ORTHO05D001594 1.8e-22 110.2 159 42.8
Hund05564 Selenicereus undatus HOM05D003415 ORTHO05D001594 1.8e-22 110.2 169 42.0
A09p04600 Brassica napus HOM05D003415 ORTHO05D001594 2.3e-22 109.8 163 43.6
AL8G21800 Arabidopsis lyrata HOM05D003415 ORTHO05D001594 5.2e-22 108.6 165 41.2
BcaC04g23764 Brassica carinata HOM05D003415 ORTHO05D001594 5.2e-22 108.6 159 42.1
ClCG07G001990 Citrullus lanatus HOM05D003415 ORTHO05D001594 6.8e-22 108.2 197 36.5
Glyma.16G094900 Glycine max HOM05D003415 ORTHO05D001594 6.8e-22 108.2 163 42.3
ECA247G1071 Erigeron canadensis HOM05D003415 ORTHO05D001594 8.9e-22 107.8 163 42.3
Lsat_1_v5_gn_9_12441 Lactuca sativa HOM05D003415 ORTHO05D001594 8.9e-22 107.8 170 38.8
Carub.0008s0847 Capsella rubella HOM05D003415 ORTHO05D001594 1.5e-21 107.1 165 40.6
arahy.Tifrunner.gnm1.ann1.FUXK5I Arachis hypogaea HOM05D003415 ORTHO05D001594 2.0e-21 106.7 177 40.1
Nitab4.5_0001564g0080 Nicotiana tabacum HOM05D003415 ORTHO05D001594 2.0e-21 106.7 125 46.4
Phvul.010G020000 Phaseolus vulgaris HOM05D003415 ORTHO05D001594 2.0e-21 106.7 166 41.6
Sp2g19130 Schrenkiella parvula HOM05D003415 ORTHO05D001594 2.6e-21 106.3 165 40.0
arahy.Tifrunner.gnm1.ann1.NLS2AK Arachis hypogaea HOM05D003415 ORTHO05D001594 4.4e-21 105.5 177 39.5
Lj3g0005113 Lotus japonicus HOM05D003415 ORTHO05D001594 4.4e-21 105.5 171 41.5
VMungo1383G3594 Vigna mungo HOM05D003415 ORTHO05D001594 4.4e-21 105.5 168 39.3
CARHR183170 Cardamine hirsuta HOM05D003415 ORTHO05D001594 5.8e-21 105.1 168 39.9
Ca_17420_v3 Cicer arietinum L. HOM05D003415 ORTHO05D001594 5.8e-21 105.1 167 38.9
Aqoxy5G00010 Aquilegia oxysepala HOM05D003415 ORTHO05D001594 9.8e-21 104.4 172 36.0
Haze_24816 Corylus avellana HOM05D003415 ORTHO05D001594 9.8e-21 104.4 170 40.6
MBI07_g28644_MAGBIO Magnolia biondii HOM05D003415 ORTHO05D001594 1.3e-20 104.0 170 40.0
Glyma.08G351100 Glycine max HOM05D003415 ORTHO05D001594 1.7e-20 103.6 171 38.6
DCAR_001774 Daucus carota HOM05D003415 ORTHO05D001594 3.7e-20 102.4 171 39.8
Aa31sc37G20 Aethionema arabicum HOM05D003415 ORTHO05D001594 6.4e-20 101.7 146 43.8
Ca_26921_v3 Cicer arietinum L. HOM05D003415 ORTHO05D001594 6.4e-20 101.7 167 42.5
BcaC06g30764 Brassica carinata HOM05D003415 ORTHO05D001594 8.3e-20 101.3 164 40.2
Lj1g0007221 Lotus japonicus HOM05D003415 ORTHO05D001594 1.1e-19 100.9 168 39.3
Psat3g147480 Pisum sativum HOM05D003415 ORTHO05D001594 1.1e-19 100.9 169 38.5
BolC7t44457H Brassica oleracea HOM05D003415 ORTHO05D001594 1.4e-19 100.5 164 40.2
Phvul.008G128100 Phaseolus vulgaris HOM05D003415 ORTHO05D001594 1.4e-19 100.5 166 39.2
VMungo0331G0848 Vigna mungo HOM05D003415 ORTHO05D001594 2.4e-19 99.8 166 39.8
Migut.N00203 Erythranthe guttata HOM05D003415 ORTHO05D001594 3.2e-19 99.4 100 56.0
PGR083G1672 Punica granatum HOM05D003415 ORTHO05D001594 3.2e-19 99.4 162 41.4
A06p38960 Brassica napus HOM05D003415 ORTHO05D001594 5.4e-19 98.6 169 39.6
C07p39370 Brassica napus HOM05D003415 ORTHO05D001594 5.4e-19 98.6 152 42.1
arahy.Tifrunner.gnm1.ann1.NIIH12 Arachis hypogaea HOM05D003415 ORTHO05D001594 9.2e-19 97.8 221 33.9
BraA06t26810Z Brassica rapa HOM05D003415 ORTHO05D001594 1.2e-18 97.4 170 40.0
Psat0s4384g0080 Pisum sativum HOM05D003415 ORTHO05D001594 1.6e-18 97.1 175 38.9
Medtr7g056400 Medicago truncatula HOM05D003415 ORTHO05D001594 3.5e-18 95.9 165 40.0
Thhalv10004684m.g Eutrema salsugineum HOM05D003415 ORTHO05D001594 4.6e-18 95.5 165 39.4
Glyma.18G164900 Glycine max HOM05D003415 ORTHO05D001594 4.6e-18 95.5 179 37.4
TPR.G17145 Trifolium pratense HOM05D003415 ORTHO05D001594 1.3e-17 94.0 168 36.3
Sc05g0002030 Simmondsia chinensis HOM05D003415 ORTHO05D001594 3.0e-17 92.8 164 39.0
Lalb_Chr07g0194281 Lupinus albus HOM05D003415 ORTHO05D001594 3.9e-17 92.4 168 38.1
Psat3g016080 Pisum sativum HOM05D000017 ORTHO05D000013 6.6e-17 91.7 157 38.2
THA.LOC104802669 Tarenaya hassleriana HOM05D003415 ORTHO05D001594 8.6e-17 91.3 174 35.1
arahy.Tifrunner.gnm1.ann1.M88YV2 Arachis hypogaea HOM05D003415 ORTHO05D001594 1.5e-16 90.5 218 33.9
BcaB07g30041 Brassica carinata HOM05D003415 ORTHO05D001594 1.9e-16 90.1 172 37.2
Sc17g0002270 Simmondsia chinensis HOM05D003415 ORTHO05D001594 9.5e-16 87.8 165 36.4
THA.LOC104822499 Tarenaya hassleriana HOM05D003415 ORTHO05D001594 2.8e-15 86.3 167 34.1
PSO170G0299 Papaver somniferum HOM05D003415 ORTHO05D001594 1.1e-14 84.3 167 37.1
CDE05G2570 Ceratophyllum demersum HOM05D003415 ORTHO05D001594 1.4e-14 84.0 169 36.7
SalBow2G2780 Salvia bowleyana HOM05D003415 ORTHO05D001594 1.8e-14 83.6 219 29.7
THA.LOC104818962 Tarenaya hassleriana HOM05D003415 ORTHO05D001594 1.8e-14 83.6 131 42.7
AUR62008928 Chenopodium quinoa HOM05D003415 ORTHO05D001594 1.2e-13 80.9 169 37.3
Lalb_Chr19g0125701 Lupinus albus HOM05D003415 ORTHO05D001594 1.2e-13 80.9 179 34.1
Medtr8g013095 Medicago truncatula HOM05D003415 ORTHO05D001594 1.2e-13 80.9 164 37.2
Aa31LG10G10800 Aethionema arabicum HOM05D003415 ORTHO05D001594 2.6e-13 79.7 147 36.7
AUR62001103 Chenopodium quinoa HOM05D003415 ORTHO05D001594 3.4e-13 79.3 169 37.3
PSO357G0522 Papaver somniferum HOM05D003415 ORTHO05D001594 3.4e-13 79.3 126 42.1
EL10Ac7g17856 Beta vulgaris HOM05D003415 ORTHO05D001594 9.9e-13 77.8 174 33.9
C02p56780 Brassica napus HOM05D003415 ORTHO05D001594 2.9e-12 76.3 149 36.2
unitig_748.g8333 Utricularia gibba HOM05D003415 ORTHO05D001594 7.1e-11 71.6 95 40.0
MBI11_g07427_MAGBIO Magnolia biondii HOM05D003415 ORTHO05D001594 1.2e-10 70.9 145 36.6
Psat6g137760 Pisum sativum HOM05D003415 ORTHO05D001594 1.2e-10 70.9 170 31.2
HPP92_000350 Vanilla planifolia HOM05D003415 ORTHO05D001594 2.7e-10 69.7 158 31.0
Psat4g164680 Pisum sativum HOM05D003584 ORTHO05D004148 6.0e-10 68.6 95 43.2
CDE06G0847 Ceratophyllum demersum HOM05D003415 ORTHO05D001594 1.7e-09 67.0 163 34.4
ATR1147G016 Amborella trichopoda HOM05D003415 ORTHO05D001594 8.6e-09 64.7 185 30.8
SHI35373 Sapria himalayana HOM05D003415 ORTHO05D001594 8.6e-09 64.7 153 32.7
unitig_32.g10820 Utricularia gibba HOM05D001851 ORTHO05D002237 8.6e-09 64.7 92 41.3
Sabra14G0142800 Salix brachista HOM05D003415 ORTHO05D001594 1.5e-08 63.9 115 40.0
CDE05G2723 Ceratophyllum demersum HOM05D003415 ORTHO05D001594 3.3e-08 62.8 134 36.6
DCAR_029194 Daucus carota HOM05D003415 ORTHO05D001594 1.2e-07 60.8 185 30.3
HPP92_000417 Vanilla planifolia HOM05D003415 ORTHO05D001594 1.6e-07 60.5 152 29.6
A07p06030 Brassica napus HOM05D003415 ORTHO05D001594 4.7e-07 58.9 97 39.2


User provided reference genes

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