Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 1.4e-173 612.8 298 100.0
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.5e-151 538.9 271 94.5
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 2.8e-150 535.4 273 95.2
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.0e-149 531.9 265 95.5
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 3.0e-149 531.9 273 94.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 9.2e-146 520.4 288 88.9
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 7.3e-143 510.8 306 83.0
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 2.7e-129 465.7 271 81.9
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 3.3e-127 458.8 273 80.2
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 2.3e-125 452.6 285 77.5
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 3.1e-125 452.2 280 78.2
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 8.9e-125 450.7 288 76.0
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 2.6e-124 449.1 273 79.9
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 4.4e-124 448.4 308 71.1
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 9.9e-124 447.2 277 78.0
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.2e-123 446.0 287 76.3
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.1e-122 443.7 278 75.9
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 7.1e-122 441.0 275 76.7
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 7.1e-122 441.0 277 75.5
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 9.2e-122 440.7 285 74.7
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 2.1e-121 439.5 285 76.1
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.7e-121 439.1 285 75.4
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 2.7e-121 439.1 285 74.7
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 3.5e-121 438.7 285 72.3
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 4.6e-121 438.3 285 73.7
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 6.0e-121 438.0 277 74.0
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 1.7e-120 436.4 305 69.5
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 3.9e-120 435.3 285 73.0
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 5.1e-120 434.9 292 71.9
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 5.1e-120 434.9 278 73.7
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 6.6e-120 434.5 285 72.6
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 8.6e-120 434.1 285 71.9
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 4.3e-119 431.8 272 75.0
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 5.6e-119 431.4 295 71.5
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.6e-118 429.9 276 74.3
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.4e-117 426.8 285 71.2
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.5e-116 423.3 276 72.1
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 2.0e-116 422.9 285 71.6
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 2.0e-116 422.9 282 73.0
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 4.4e-116 421.8 285 69.5
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 4.4e-116 421.8 286 71.0
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 9.9e-116 420.6 285 71.2
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.9e-114 416.4 285 70.5
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 2.4e-114 416.0 264 74.2
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 9.3e-114 414.1 271 74.2
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 1.6e-113 413.3 266 73.7
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 2.1e-113 412.9 276 73.6
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.7e-113 412.5 277 73.6
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 4.6e-113 411.8 277 73.3
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 6.0e-113 411.4 277 73.3
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.3e-112 410.2 280 72.5
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 5.1e-112 408.3 275 72.0
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 3.3e-111 405.6 283 68.2
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.3e-110 403.7 277 68.2
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.3e-110 403.7 271 72.3
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.3e-110 403.7 278 69.1
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 2.1e-110 402.9 273 72.2
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.1e-109 400.6 270 70.0
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.4e-109 400.2 288 67.0
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.2e-108 397.1 280 68.9
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 1.5e-108 396.7 273 68.9
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 2.0e-108 396.4 219 84.9
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.3e-107 393.7 285 65.6
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.7e-107 393.3 274 70.1
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.7e-107 393.3 274 70.1
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 3.8e-107 392.1 292 65.1
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 3.8e-107 392.1 293 65.2
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 4.9e-107 391.7 288 65.3
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 4.9e-107 391.7 280 66.1
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.1e-106 390.6 287 65.5
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.4e-106 389.4 287 65.2
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 2.4e-106 389.4 287 65.2
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.2e-105 387.1 275 69.5
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.1e-105 386.3 287 65.2
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 3.0e-104 382.5 273 67.8
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 5.1e-104 381.7 288 63.5
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 8.7e-104 380.9 288 64.6
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.1e-103 380.6 293 64.5
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.1e-103 380.6 291 64.3
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.5e-103 380.2 275 67.6
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 3.3e-103 379.0 275 67.6
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.3e-103 378.6 275 67.3
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.3e-102 377.1 294 62.9
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.3e-102 377.1 268 68.7
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.8e-101 373.2 273 66.3
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.4e-101 372.9 269 67.3
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 3.1e-101 372.5 266 67.7
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.5e-100 370.2 275 66.5
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.4e-93 347.1 281 65.1
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 4.0e-93 345.5 276 60.1
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.2e-92 344.0 269 63.2
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 5.8e-92 341.7 255 64.7
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 7.9e-89 331.3 278 60.8
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 3.9e-88 328.9 246 67.9
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 3.6e-81 305.8 204 75.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 3.0e-80 302.8 275 54.2
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.5e-79 300.4 221 63.8
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.9e-79 300.1 272 57.4
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 3.7e-78 295.8 210 70.0
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 4.1e-77 292.4 221 62.9
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 6.9e-69 265.0 224 58.5
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.0e-68 263.5 220 56.4
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 7.2e-66 255.0 220 53.2
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 4.8e-62 242.3 183 65.0
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 8.0e-57 224.9 249 44.2
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.1e-37 161.4 108 72.2
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 5.0e-35 152.5 133 58.6
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.6e-19 99.0 96 55.2
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.9e-18 97.4 226 27.4
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 5.2e-16 89.4 280 27.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.2e-14 84.0 104 45.2
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 5.4e-13 79.3 53 79.2
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.8e-09 67.0 313 23.0
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 3.4e-07 60.1 57 56.1


User provided reference genes

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