Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 2.3e-96 355.5 173 100.0
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.1e-93 346.7 173 97.7
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.5e-92 342.8 172 96.5
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 7.1e-90 334.0 169 95.9
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 8.6e-88 327.0 172 89.5
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 4.6e-81 304.7 171 84.2
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 7.8e-81 303.9 165 87.3
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.0e-80 303.5 169 84.6
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 3.0e-80 302.0 169 84.0
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 2.5e-79 298.9 170 82.4
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.5e-79 298.9 169 84.0
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 3.3e-79 298.5 170 82.9
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.3e-79 298.1 170 82.4
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 7.3e-79 297.4 170 81.8
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.6e-78 296.2 146 97.3
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 2.1e-78 295.8 165 85.5
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 4.8e-78 294.7 170 80.6
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 6.2e-78 294.3 168 82.1
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 6.2e-78 294.3 170 81.2
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 6.2e-78 294.3 167 81.4
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.8e-77 292.7 170 80.6
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 3.1e-77 292.0 170 81.8
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 3.1e-77 292.0 166 82.5
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 4.0e-77 291.6 170 80.0
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 6.9e-77 290.8 167 81.4
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 9.0e-77 290.4 169 81.1
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 9.0e-77 290.4 166 83.1
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 9.0e-77 290.4 167 81.4
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.2e-76 290.0 166 81.9
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.2e-76 290.0 166 81.9
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 1.5e-76 289.7 170 81.2
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.6e-76 288.9 164 82.9
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 2.6e-76 288.9 167 81.4
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.6e-76 288.9 168 81.0
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 3.4e-76 288.5 169 79.9
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 4.4e-76 288.1 170 80.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 4.4e-76 288.1 165 80.6
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 4.4e-76 288.1 167 82.0
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 7.6e-76 287.3 166 81.3
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 9.9e-76 287.0 166 81.9
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 9.9e-76 287.0 166 81.3
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 9.9e-76 287.0 164 81.7
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.3e-75 286.6 170 79.4
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.7e-75 286.2 165 82.4
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.7e-75 286.2 167 81.4
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.9e-75 285.4 166 79.5
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.9e-75 285.4 166 80.7
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.8e-75 285.0 164 80.5
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 4.9e-75 284.6 170 79.4
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 6.4e-75 284.3 170 80.0
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.1e-74 283.5 165 80.6
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.1e-74 283.5 166 78.9
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-74 283.1 167 79.6
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.4e-74 282.3 165 80.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 2.4e-74 282.3 166 80.7
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.4e-74 282.3 165 79.4
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.4e-74 282.3 165 79.4
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 5.4e-74 281.2 169 78.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 7.1e-74 280.8 165 79.4
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.2e-73 280.0 167 79.0
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 1.6e-73 279.6 169 76.3
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.6e-73 279.6 165 80.0
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 2.7e-73 278.9 164 78.7
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.0e-72 276.9 167 77.8
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 5.1e-72 274.6 165 76.4
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 1.1e-71 273.5 164 78.7
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.9e-71 272.7 193 69.9
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.5e-71 272.3 169 78.7
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 4.3e-71 271.6 165 77.6
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 5.6e-71 271.2 164 78.7
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 5.6e-71 271.2 164 78.7
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 5.6e-71 271.2 163 79.8
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 9.6e-71 270.4 166 78.3
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 9.6e-71 270.4 166 74.1
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.3e-70 270.0 165 78.2
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.3e-70 270.0 155 81.9
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.6e-70 269.6 165 77.6
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.6e-70 269.6 165 77.6
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.6e-70 269.6 165 77.6
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 2.1e-70 269.2 166 78.9
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 2.1e-70 269.2 162 79.6
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 2.1e-70 269.2 162 79.6
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.8e-70 268.9 165 75.8
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.6e-70 268.5 166 76.5
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 4.8e-70 268.1 162 79.0
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.8e-69 266.2 166 77.1
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.0e-68 262.7 162 77.8
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.6e-65 253.1 179 70.9
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.1e-65 252.7 171 71.9
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 6.0e-65 251.1 207 63.8
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.9e-63 246.1 165 69.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 4.3e-63 245.0 174 71.3
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.5e-60 236.5 170 64.1
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 7.6e-60 234.2 166 68.7
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 2.2e-59 232.6 174 63.8
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 9.3e-58 227.3 151 73.5
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 7.9e-57 224.2 152 75.7
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.5e-55 219.9 169 64.5
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 6.9e-53 211.1 170 64.7
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 2.0e-52 209.5 131 74.8
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 8.4e-51 204.1 121 80.2
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 2.7e-49 199.1 130 72.3
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 8.7e-48 194.1 110 82.7
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.2e-44 183.7 118 72.9
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 8.5e-43 177.6 114 72.8
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.1e-41 172.9 114 71.1
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.1e-41 171.4 114 71.1
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 3.9e-40 168.7 177 48.6
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 8.8e-40 167.5 188 47.9
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.7e-38 163.3 93 83.9
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.7e-38 163.3 94 84.0
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.1e-37 160.6 109 73.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.1e-37 160.6 100 77.0
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.3e-22 110.5 158 39.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.5e-18 95.1 49 89.8
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 3.0e-16 89.4 50 82.0
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 4.4e-15 85.5 167 29.9
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 1.4e-13 80.5 177 27.7
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 9.1e-13 77.8 169 28.4
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 9.1e-13 77.8 67 58.2
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 6.3e-06 55.1 60 48.3


User provided reference genes

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