Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024639 Solanum tuberosum HOM05D001053 ORTHO05D004820 3.1e-104 381.7 182 100.0
Solyc03g115150.4 Solanum lycopersicum HOM05D001053 ORTHO05D004820 4.6e-100 367.9 182 96.7
Sopen03g034210 Solanum pennellii HOM05D001053 ORTHO05D004820 2.8e-97 358.6 182 95.1
Nitab4.5_0001485g0180 Nicotiana tabacum HOM05D001053 ORTHO05D004820 3.0e-91 338.6 182 88.5
CAN.G1228.29 Capsicum annuum HOM05D001053 ORTHO05D004820 3.9e-91 338.2 182 88.5
Nitab4.5_0012564g0010 Nicotiana tabacum HOM05D001053 ORTHO05D004820 8.8e-91 337.0 182 87.4
Peaxi162Scf00201g00236 Petunia axillaris HOM05D001053 ORTHO05D004820 1.7e-86 322.8 182 83.0
MSTRG.22987 Avicennia marina HOM05D001053 ORTHO05D004820 9.8e-74 280.4 182 69.8
vmacro17607 Vaccinium macrocarpon HOM05D001053 ORTHO05D004820 3.7e-73 278.5 182 69.2
Oeu031813.2 Olea europaea HOM05D001053 ORTHO05D004820 8.3e-73 277.3 182 68.7
Eucgr.L02060 Eucalyptus grandis HOM05D001053 ORTHO05D004820 9.1e-72 273.9 182 68.1
Actinidia04826 Actinidia chinensis HOM05D001053 ORTHO05D004820 5.9e-71 271.2 182 68.1
Dinv17408 Davidia involucrata HOM05D001053 ORTHO05D004820 6.5e-70 267.7 182 65.9
Eucgr.K02528 Eucalyptus grandis HOM05D001053 ORTHO05D004820 6.5e-70 267.7 182 67.0
COL.COLO4_06864 Corchorus olitorius HOM05D001053 ORTHO05D004820 8.5e-70 267.3 182 67.0
Sc04g0004320 Simmondsia chinensis HOM05D001053 ORTHO05D004820 1.5e-69 266.5 182 64.3
Cc00_g07600 Coffea canephora HOM05D001053 ORTHO05D004820 2.5e-69 265.8 182 67.6
Duzib068G1187 Durio zibethinus HOM05D001053 ORTHO05D004820 7.2e-69 264.2 182 66.5
Duzib205G1512 Durio zibethinus HOM05D001053 ORTHO05D004820 9.4e-69 263.8 182 65.9
Gorai.003G101100 Gossypium raimondii HOM05D001053 ORTHO05D004820 9.4e-69 263.8 182 65.9
Hund02590 Selenicereus undatus HOM05D001053 ORTHO05D004820 9.4e-69 263.8 182 64.3
Eucgr.K02530 Eucalyptus grandis HOM05D001053 ORTHO05D004820 8.0e-68 260.8 182 65.4
Eucgr.B01265 Eucalyptus grandis HOM05D001053 ORTHO05D004820 1.4e-67 260.0 182 64.8
Potri.004G092900 Populus trichocarpa HOM05D001053 ORTHO05D004820 1.8e-67 259.6 181 63.0
Gohir.A03G069900 Gossypium hirsutum HOM05D001053 ORTHO05D004820 8.8e-67 257.3 174 66.7
Ciclev10019240m.g Citrus clementina HOM05D001053 ORTHO05D004820 1.5e-66 256.5 182 65.4
Lj5C103T5 Lonicera japonica HOM05D001053 ORTHO05D004820 1.5e-66 256.5 182 64.8
Thecc.03G101100 Theobroma cacao HOM05D001053 ORTHO05D004820 1.5e-66 256.5 181 63.5
GSVIVG01007870001 Vitis vinifera HOM05D001053 ORTHO05D004820 2.0e-66 256.1 182 64.8
Lsat_1_v5_gn_4_111000 Lactuca sativa HOM05D001053 ORTHO05D004820 2.6e-66 255.8 182 63.2
Manes.06G085100 Manihot esculenta HOM05D001053 ORTHO05D004820 5.7e-66 254.6 188 63.8
Rhsim08G0146300 Rhododendron simsii HOM05D001053 ORTHO05D004820 9.8e-66 253.8 182 66.5
HanXRQChr16g0502421 Helianthus annuus HOM05D001053 ORTHO05D004820 3.7e-65 251.9 182 63.2
Sabra04G0062400 Salix brachista HOM05D001053 ORTHO05D004820 1.4e-64 250.0 181 63.0
Cpa.g.sc94.50 Carica papaya HOM05D001053 ORTHO05D004820 5.4e-64 248.1 183 63.4
FAN08G0910 Fragaria x ananassa HOM05D001053 ORTHO05D004820 1.6e-63 246.5 183 60.7
ECA232G4674 Erigeron canadensis HOM05D001053 ORTHO05D004820 7.7e-63 244.2 182 61.5
PGR044G1429 Punica granatum HOM05D001053 ORTHO05D004820 1.3e-62 243.4 182 62.6
FAN13G0112 Fragaria x ananassa HOM05D001053 ORTHO05D004820 1.7e-62 243.0 183 60.1
FvH4_5g13910 Fragaria vesca HOM05D001053 ORTHO05D004820 3.8e-62 241.9 183 60.1
THA.LOC104801191 Tarenaya hassleriana HOM05D001053 ORTHO05D004820 5.0e-62 241.5 183 62.3
Atru.chr9.430 Acer truncatum HOM05D001053 ORTHO05D004820 1.1e-61 240.4 182 61.5
TWI81G0708 Tripterygium wilfordii HOM05D001053 ORTHO05D004820 1.5e-61 240.0 183 60.7
FAN18G3650 Fragaria x ananassa HOM05D001053 ORTHO05D004820 1.9e-61 239.6 183 59.6
RcHm_v2.0_Chr7g0183031 Rosa chinensis HOM05D001053 ORTHO05D004820 1.9e-61 239.6 183 58.5
Haze_07717 Corylus avellana HOM05D001053 ORTHO05D004820 2.5e-61 239.2 183 61.7
Cfa019326 Carpinus fangiana HOM05D001053 ORTHO05D004820 4.3e-61 238.4 182 61.0
Thhalv10003787m.g Eutrema salsugineum HOM05D001053 ORTHO05D004820 4.3e-61 238.4 182 60.4
Aqoxy3G03637 Aquilegia oxysepala HOM05D001053 ORTHO05D004820 5.6e-61 238.0 182 56.6
Carub.0008s2174 Capsella rubella HOM05D001053 ORTHO05D004820 7.3e-61 237.7 182 61.5
MD14G1211400 Malus domestica HOM05D001053 ORTHO05D004820 7.3e-61 237.7 177 58.8
Hma1.2p1_0060F.1_g033160 Hydrangea macrophylla HOM05D001053 ORTHO05D004820 1.2e-60 236.9 181 59.1
QL10p019416 Quercus lobata HOM05D001053 ORTHO05D004820 1.6e-60 236.5 181 60.2
Prupe.5G204500 Prunus persica HOM05D001053 ORTHO05D004820 2.1e-60 236.1 185 60.0
Nn3g17442 Nelumbo nucifera HOM05D001053 ORTHO05D004820 2.8e-60 235.7 182 59.9
EL10Ac5g11123 Beta vulgaris HOM05D001053 ORTHO05D004820 1.4e-59 233.4 182 59.9
Carub.0008s2175 Capsella rubella HOM05D001053 ORTHO05D004820 3.0e-59 232.3 182 59.9
CiPaw.11G052800 Carya illinoinensis HOM05D001053 ORTHO05D004820 6.8e-59 231.1 182 59.3
MD06G1202300 Malus domestica HOM05D001053 ORTHO05D004820 4.4e-58 228.4 182 59.3
Ah.11g047830 Amaranthus hybridus HOM05D001053 ORTHO05D004820 5.7e-58 228.0 182 58.2
C07p44790 Brassica napus HOM05D001053 ORTHO05D004820 7.5e-58 227.6 182 58.2
BolC7t45003H Brassica oleracea HOM05D001053 ORTHO05D004820 7.5e-58 227.6 182 58.2
DCAR_011558 Daucus carota HOM05D001053 ORTHO05D004820 2.2e-57 226.1 160 61.2
Sp2g24350 Schrenkiella parvula HOM05D001053 ORTHO05D004820 2.9e-57 225.7 182 56.6
CARHR274760 Cardamine hirsuta HOM05D001053 ORTHO05D004820 4.9e-57 224.9 183 58.5
MELO3C017221.2 Cucumis melo HOM05D001053 ORTHO05D004820 4.9e-57 224.9 184 58.7
CANSAT80G2151 Cannabis sativa HOM05D001053 ORTHO05D004820 6.4e-57 224.6 183 56.8
A03p46750 Brassica napus HOM05D001053 ORTHO05D004820 8.3e-57 224.2 182 56.6
BraA03t13797Z Brassica rapa HOM05D001053 ORTHO05D004820 8.3e-57 224.2 182 56.6
AL8G37710 Arabidopsis lyrata HOM05D001053 ORTHO05D004820 1.1e-56 223.8 182 58.2
ClCG06G015680 Citrullus lanatus HOM05D001053 ORTHO05D004820 1.4e-56 223.4 184 58.2
Lj4g0023799 Lotus japonicus HOM05D001053 ORTHO05D004820 1.4e-56 223.4 182 57.1
PSO017G5497 Papaver somniferum HOM05D001053 ORTHO05D004820 2.4e-56 222.6 183 55.2
TPR.G2048 Trifolium pratense HOM05D001053 ORTHO05D004820 2.4e-56 222.6 177 55.9
unitig_26.g9658 Utricularia gibba HOM05D001053 ORTHO05D004820 2.4e-56 222.6 181 58.0
Aa31LG11G2250 Aethionema arabicum HOM05D001053 ORTHO05D004820 2.0e-55 219.5 183 55.7
Psat0s3618g0040 Pisum sativum HOM05D001053 ORTHO05D004820 2.7e-55 219.2 181 54.7
AT5G61060 Arabidopsis thaliana HOM05D001053 ORTHO05D004820 3.5e-55 218.8 182 57.1
CsaV3_1G002870 Cucumis sativus L. HOM05D001053 ORTHO05D004820 3.5e-55 218.8 184 56.5
TAR629G3345 Trochodendron aralioides HOM05D001053 ORTHO05D004820 4.6e-55 218.4 222 49.5
AUR62008521 Chenopodium quinoa HOM05D001053 ORTHO05D004820 1.3e-54 216.9 182 55.5
Lalb_Chr12g0197171 Lupinus albus HOM05D001053 ORTHO05D004820 1.3e-54 216.9 182 55.5
Medtr4g109500 Medicago truncatula HOM05D001053 ORTHO05D004820 1.3e-54 216.9 177 55.9
Sed0006061 Sechium edule HOM05D001053 ORTHO05D004820 1.3e-54 216.9 185 58.4
arahy.Tifrunner.gnm1.ann1.EY28RQ Arachis hypogaea HOM05D001053 ORTHO05D004820 5.0e-54 214.9 181 55.8
BcaC04g23464 Brassica carinata HOM05D001053 ORTHO05D004820 5.0e-54 214.9 181 55.8
BolC9t53720H Brassica oleracea HOM05D001053 ORTHO05D004820 5.0e-54 214.9 181 55.8
BraA09t36371Z Brassica rapa HOM05D001053 ORTHO05D004820 5.0e-54 214.9 181 55.8
C09p08060 Brassica napus HOM05D001053 ORTHO05D004820 6.6e-54 214.5 181 55.8
Ca_21779_v3 Cicer arietinum L. HOM05D001053 ORTHO05D004820 1.1e-53 213.8 177 54.2
Glyma.05G021400 Glycine max HOM05D001053 ORTHO05D004820 1.5e-53 213.4 177 54.2
Glyma.17G078000 Glycine max HOM05D001053 ORTHO05D004820 1.9e-53 213.0 177 53.7
arahy.Tifrunner.gnm1.ann1.30WRMH Arachis hypogaea HOM05D001053 ORTHO05D004820 3.3e-53 212.2 181 55.2
AUR62021568 Chenopodium quinoa HOM05D001053 ORTHO05D004820 9.5e-53 210.7 182 53.8
VMungo1215G0855 Vigna mungo HOM05D001053 ORTHO05D004820 8.0e-52 207.6 177 53.1
Phvul.003G185200 Phaseolus vulgaris HOM05D001053 ORTHO05D004820 1.8e-51 206.5 178 51.7
BraA09t36370Z Brassica rapa HOM05D001053 ORTHO05D004820 4.0e-51 205.3 190 52.1
AT5G61050 Arabidopsis thaliana HOM05D001053 ORTHO05D004820 8.9e-51 204.1 182 52.7
A09p07210 Brassica napus HOM05D001053 ORTHO05D004820 7.5e-50 201.1 206 48.5
Zm00001eb108570 Zea mays HOM05D001053 ORTHO05D004820 7.5e-50 201.1 191 49.7
CDE02G2613 Ceratophyllum demersum HOM05D001053 ORTHO05D004820 9.8e-50 200.7 182 57.1
BcaC06g33180 Brassica carinata HOM05D001053 ORTHO05D004820 5.4e-48 194.9 181 53.0
Os07g0602200 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D004820 9.2e-48 194.1 191 48.7
HPP92_006052 Vanilla planifolia HOM05D001053 ORTHO05D004820 7.8e-47 191.0 162 51.9
BcaC04g23465 Brassica carinata HOM05D001053 ORTHO05D004820 3.1e-43 179.1 156 55.1
SGA_v2.0_scaffold313G48312 Striga asiatica HOM05D000001 ORTHO05D004820 8.3e-41 171.0 181 43.1
SMO203G0267 Selaginella moellendorffii HOM05D001053 ORTHO05D004820 2.0e-34 149.8 177 42.4
BolC9t53719H Brassica oleracea HOM05D001053 ORTHO05D004820 2.2e-33 146.4 182 44.5
ATR0064G039 Amborella trichopoda HOM05D001053 ORTHO05D004820 3.2e-32 142.5 124 52.4
C09p08050 Brassica napus HOM05D001053 ORTHO05D004820 3.2e-32 142.5 182 45.1
Gohir.D03G096500 Gossypium hirsutum HOM05D001053 ORTHO05D004820 3.5e-31 139.0 107 59.8
Pp3c14_21020 Physcomitrium patens HOM05D001053 ORTHO05D004820 3.5e-31 139.0 176 39.2
Mapoly0023s0094 Marchantia polymorpha HOM05D001053 ORTHO05D004820 7.6e-26 121.3 186 37.1
CBR_g20016 Chara braunii HOM05D001053 ORTHO05D004820 2.2e-17 93.2 188 33.0
MCO07G211 Micromonas commoda HOM05D001053 ORTHO05D004820 3.3e-13 79.3 197 32.0
Migut.I00311 Erythranthe guttata HOM05D001053 ORTHO05D004820 1.9e-08 63.5 53 58.5


User provided reference genes

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