Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 1.8e-96 355.9 181 100.0
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 7.7e-87 323.9 182 92.9
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 7.7e-87 323.9 182 92.9
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 5.5e-85 317.8 182 91.2
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.5e-82 309.7 182 88.5
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-82 308.5 182 89.0
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 7.4e-82 307.4 182 88.5
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 3.7e-81 305.1 182 86.8
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 4.8e-81 304.7 182 86.8
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.8e-80 302.8 182 86.8
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.8e-80 302.8 182 86.8
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 3.1e-80 302.0 182 85.7
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 2.0e-79 299.3 182 85.7
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 2.0e-79 299.3 182 86.3
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 2.0e-79 299.3 182 86.3
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 4.5e-79 298.1 182 86.3
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 1.0e-78 297.0 182 84.6
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 6.5e-78 294.3 182 84.6
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.4e-77 293.1 182 84.6
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.9e-76 287.3 179 84.9
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 6.7e-75 284.3 182 83.5
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 8.8e-75 283.9 182 83.5
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.5e-74 283.1 182 81.9
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 2.0e-74 282.7 170 88.8
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 2.0e-74 282.7 170 88.8
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 7.4e-74 280.8 182 83.0
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 7.4e-74 280.8 182 83.0
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 2.8e-73 278.9 182 82.4
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 3.7e-73 278.5 183 83.1
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.5e-71 273.1 182 80.2
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-69 266.9 179 78.8
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.4e-66 255.0 156 87.2
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 2.8e-65 252.3 179 73.7
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.8e-65 251.5 182 75.8
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.1e-64 248.8 162 80.9
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 9.1e-64 247.3 165 77.0
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 4.5e-63 245.0 162 80.2
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.0e-62 243.8 180 71.7
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 6.1e-60 234.6 138 86.2
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 3.8e-54 215.3 159 70.4
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 9.4e-53 210.7 167 67.7
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 2.7e-52 209.1 181 66.9
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 3.6e-52 208.8 114 91.2
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 3.6e-52 208.8 114 91.2
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 3.6e-52 208.8 114 91.2
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 3.6e-52 208.8 114 91.2
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 3.6e-52 208.8 114 91.2
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 6.1e-52 208.0 135 83.0
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-51 207.2 114 90.4
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-51 207.2 114 90.4
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.5e-50 203.4 114 86.0
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.4e-50 201.8 114 87.7
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 7.5e-50 201.1 103 96.1
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.3e-49 200.3 128 85.9
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 1.3e-49 200.3 149 71.1
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 1.8e-48 196.4 154 68.2
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 1.6e-47 193.4 114 85.1
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.6e-47 193.4 102 91.2
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.0e-46 190.7 103 90.3
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 1.0e-46 190.7 131 78.6
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.8e-46 188.7 114 82.5
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 6.6e-46 188.0 103 89.3
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 5.5e-45 184.9 103 88.3
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.2e-45 184.5 114 81.6
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.6e-44 183.3 128 78.9
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 1.5e-42 176.8 103 82.5
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 4.4e-42 175.3 114 75.4
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 9.2e-40 167.5 103 82.5
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.2e-40 167.5 90 91.1
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 3.5e-39 165.6 112 79.5
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.9e-38 162.5 94 79.8
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 9.5e-37 157.5 136 66.2
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 7.5e-34 147.9 109 75.2
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 6.4e-33 144.8 99 78.8
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 1.9e-32 143.3 77 89.6
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.2e-31 140.6 104 71.2
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.2e-28 130.6 178 48.3
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.2e-28 130.6 178 48.3
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 1.2e-28 130.6 75 84.0
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 1.6e-28 130.2 65 98.5
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 2.8e-28 129.4 89 70.8
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 4.0e-27 125.6 66 90.9
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.2e-26 124.0 81 84.0
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.8e-26 121.7 74 82.4
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 9.8e-26 120.9 129 55.8
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 1.1e-24 117.5 86 70.9
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 2.4e-24 116.3 67 86.6
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-22 109.8 64 82.8
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 5.1e-22 108.6 67 80.6
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 5.1e-22 108.6 67 80.6
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 4.3e-21 105.5 61 85.2
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 5.2e-19 98.6 61 80.3
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 5.2e-19 98.6 66 72.7
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 4.4e-18 95.5 50 92.0
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.7e-17 93.6 49 91.8
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.9e-16 90.1 109 52.3
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.9e-16 90.1 67 74.6
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.1e-16 89.0 75 73.3
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.1e-16 89.0 55 76.4
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 5.4e-16 88.6 70 80.0
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 9.2e-16 87.8 45 91.1
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 9.2e-16 87.8 45 91.1
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 9.2e-16 87.8 45 91.1
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 9.2e-16 87.8 45 91.1
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 9.2e-16 87.8 59 76.3
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-15 87.0 57 82.5
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 6.0e-15 85.1 42 92.9
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-14 83.6 48 81.2
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 2.5e-13 79.7 104 50.0
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.6e-12 77.0 41 90.2
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.1e-12 76.6 53 79.2
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 4.7e-12 75.5 52 69.2
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 1.1e-11 74.3 52 78.8
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 1.4e-11 73.9 58 70.7
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.1e-11 72.8 37 94.6
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 1.3e-09 67.4 44 81.8
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 2.1e-07 60.1 36 86.1
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 1.3e-06 57.4 48 66.7


User provided reference genes

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