Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024004 Solanum tuberosum HOM05D000004 ORTHO05D000002 2.9e-66 255.0 119 100.0
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 5.8e-27 124.4 125 44.0
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-27 124.4 125 44.0
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-26 122.5 111 45.0
CAN.G386.37 Capsicum annuum HOM05D000004 ORTHO05D000002 3.8e-26 121.7 92 57.6
CAN.G1954.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.3e-21 106.7 96 49.0
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-21 104.8 102 44.1
Sopen10g022440 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-19 97.8 102 44.1
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.7e-18 96.3 92 47.8
Sopen02g028910 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-18 96.3 103 39.8
Sopen04g023950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-18 96.3 110 37.3
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.5e-18 94.4 101 43.6
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 8.5e-18 94.0 110 36.4
Sopen01g010380 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-16 90.1 89 39.3
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-16 90.1 92 42.4
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 2.1e-16 89.4 92 42.4
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.7e-16 89.0 114 36.8
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.7e-16 89.0 92 42.4
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 3.6e-16 88.6 92 41.3
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 6.1e-16 87.8 106 36.8
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 6.1e-16 87.8 101 37.6
Ca_22397_v3 Cicer arietinum L. HOM05D019583 ORTHO05D025031 7.9e-16 87.4 92 39.1
BolC9t56893H Brassica oleracea HOM05D011596 ORTHO05D000002 1.4e-15 86.7 103 39.8
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 2.3e-15 85.9 90 42.2
Sp1g30070 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.8e-15 84.0 92 40.2
Sopen12g020510 Solanum pennellii HOM05D019044 ORTHO05D018848 8.8e-15 84.0 113 34.5
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 9.7e-14 80.5 91 33.0
COL.COLO4_19400 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.7e-13 78.6 92 41.3
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.3e-13 77.8 92 42.4
CAN.G548.20 Capsicum annuum HOM05D000004 ORTHO05D000002 8.2e-13 77.4 68 47.1
BcaB07g33616 Brassica carinata HOM05D000004 ORTHO05D000002 1.1e-12 77.0 106 34.9
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.8e-12 76.3 92 42.4
BolC1t04627H Brassica oleracea HOM05D011596 ORTHO05D000002 2.4e-12 75.9 91 36.3
COL.COLO4_33961 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.4e-12 75.9 92 39.1
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 5.3e-12 74.7 93 40.9
Atru.chr3.1983 Acer truncatum HOM05D000004 ORTHO05D000002 6.9e-12 74.3 77 42.9
COL.COLO4_25153 Corchorus olitorius HOM05D030667 ORTHO05D000002 6.9e-12 74.3 92 40.2
Psat1g210200 Pisum sativum HOM05D000004 ORTHO05D000002 9.1e-12 73.9 101 37.6
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-11 73.2 97 38.1
PGSC0003DMG400042551 Solanum tuberosum HOM05D023338 ORTHO05D028486 2.6e-11 72.4 64 46.9
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 4.5e-11 71.6 101 35.6
BcaC05g28910 Brassica carinata HOM05D019583 ORTHO05D000002 5.9e-11 71.2 98 37.8
BolC7t43393H Brassica oleracea HOM05D011596 ORTHO05D000002 1.7e-10 69.7 84 39.3
ECA234G0112 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-10 69.7 93 37.6
SpUn0980_0010 Schrenkiella parvula HOM05D011596 ORTHO05D000002 2.2e-10 69.3 92 34.8
COL.COLO4_04709 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.9e-10 68.9 104 30.8
COL.COLO4_33175 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.9e-10 68.9 92 31.5
Gohir.A08G195550 Gossypium hirsutum HOM05D001322 ORTHO05D001301 3.8e-10 68.6 92 32.6
ECA233G4737 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-10 67.8 92 35.9
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.5e-10 67.8 69 40.6
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 8.5e-10 67.4 94 34.0
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 8.5e-10 67.4 94 34.0
Nn2g14342 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.5e-10 67.4 69 40.6
COL.COLO4_14043 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.4e-09 66.6 92 33.7
Aa31LG4G9850 Aethionema arabicum HOM05D000004 ORTHO05D000002 1.9e-09 66.2 112 30.4
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 2.5e-09 65.9 92 32.6
ECA246G2187 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-09 65.5 93 33.3
ECA234G1032 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-09 65.1 93 36.6
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-09 65.1 93 36.6
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-09 64.7 93 34.4
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-09 64.7 93 35.5
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-09 64.7 93 33.3
Psat5g116760 Pisum sativum HOM05D000004 ORTHO05D000002 5.5e-09 64.7 91 35.2
Sopen10g008640 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-09 64.7 74 36.5
Actinidia13475 Actinidia chinensis HOM05D000004 ORTHO05D000002 7.2e-09 64.3 100 35.0
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-09 64.3 93 33.3
Psat5g069760 Pisum sativum HOM05D000004 ORTHO05D000002 7.2e-09 64.3 91 35.2
COL.COLO4_16347 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.4e-09 63.9 125 27.2
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-08 63.5 93 33.3
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-08 63.5 92 37.0
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-08 63.5 92 37.0
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-08 63.5 92 37.0
CAN.G370.89 Capsicum annuum HOM05D000004 ORTHO05D000002 1.6e-08 63.2 64 40.6
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 1.6e-08 63.2 93 34.4
ECA248G1502 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.1e-08 62.8 93 31.2
ECA233G6229 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-08 62.4 93 33.3
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-08 62.4 93 33.3
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-08 62.4 107 30.8
AUR62042633 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.6e-08 62.0 103 30.1
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-08 62.0 92 33.7
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 3.6e-08 62.0 93 31.2
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 3.6e-08 62.0 92 33.7
ECA232G4351 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-08 61.6 92 33.7
Psat3g025360 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-08 61.6 93 31.2
ECA236G2364 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-08 61.2 93 33.3
AUR62004749 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.0e-07 60.5 64 39.1
COL.COLO4_33791 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.0e-07 60.5 89 34.8
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-07 60.5 92 31.5
Psat2g014880 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-07 60.5 91 35.2
ECA236G5029 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-07 60.1 93 32.3
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 60.1 76 39.5
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 60.1 76 39.5
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 60.1 76 39.5
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 60.1 76 39.5
ECA233G1543 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-07 59.7 92 32.6
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-07 59.7 102 33.3
ECA232G3081 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-07 59.3 93 32.3
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.3e-07 59.3 91 29.7
Psat3g190040 Pisum sativum HOM05D000004 ORTHO05D000002 2.3e-07 59.3 91 33.0
CAN.G1384.2 Capsicum annuum HOM05D000015 ORTHO05D000002 3.0e-07 58.9 59 40.7
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 3.0e-07 58.9 93 30.1
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 3.0e-07 58.9 91 34.1
CAN.G608.32 Capsicum annuum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 55 38.2
COL.COLO4_33444 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.9e-07 58.5 64 40.6
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-07 58.5 93 32.3
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.9e-07 58.5 94 31.9
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 3.9e-07 58.5 101 30.7
CANSAT35G0278 Cannabis sativa HOM05D000004 ORTHO05D000002 5.1e-07 58.2 95 29.5
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 5.1e-07 58.2 94 29.8
CAN.G307.22 Capsicum annuum HOM05D000061 ORTHO05D003487 6.7e-07 57.8 55 38.2
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-07 57.8 93 33.3
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.5e-06 56.6 93 31.2
Lalb_Chr23g0273591 Lupinus albus HOM05D000004 ORTHO05D000002 1.5e-06 56.6 92 32.6
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-06 56.6 103 30.1
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-06 56.6 91 31.9
CANSAT54G0535 Cannabis sativa HOM05D000004 ORTHO05D000002 2.0e-06 56.2 90 31.1
ECA247G0871 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-06 56.2 99 31.3
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-06 56.2 102 34.3
Sopen07g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 56.2 91 31.9
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.6e-06 55.8 76 30.3
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-06 55.5 115 30.4
AUR62037280 Chenopodium quinoa HOM05D000432 ORTHO05D000320 3.3e-06 55.5 70 35.7
COL.COLO4_36404 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.3e-06 55.5 77 33.8
Nn2g14669 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.3e-06 55.5 75 32.0
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 3.3e-06 55.5 106 26.4
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-06 55.1 91 30.8
PSO675G3806 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-06 54.7 90 32.2
Psat1g003800 Pisum sativum HOM05D000004 ORTHO05D000002 5.7e-06 54.7 91 34.1
BcaC07g39590 Brassica carinata HOM05D000004 ORTHO05D000002 7.4e-06 54.3 83 34.9


User provided reference genes

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