Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021759 Solanum tuberosum HOM05D002496 ORTHO05D002787 2.5e-101 372.1 187 100.0
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 1.8e-62 243.0 135 90.4
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 1.5e-61 240.0 135 89.6
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 1.5e-61 240.0 135 89.6
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 1.5e-61 240.0 135 89.6
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 2.6e-61 239.2 135 89.6
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 7.5e-61 237.7 135 88.9
CAN.G792.4 Capsicum annuum HOM05D002496 ORTHO05D002787 1.1e-59 233.8 126 92.9
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 3.8e-57 225.3 136 84.6
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 3.2e-56 222.2 136 82.4
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 7.2e-56 221.1 136 83.1
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 2.1e-55 219.5 136 82.4
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 2.1e-55 219.5 136 82.4
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 2.7e-55 219.2 136 82.4
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 2.7e-55 219.2 136 81.6
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 1.8e-54 216.5 136 81.6
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 2.3e-54 216.1 136 80.9
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 3.0e-54 215.7 136 80.9
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 3.0e-54 215.7 136 80.9
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 3.0e-54 215.7 136 80.9
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 3.0e-54 215.7 136 80.1
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 4.0e-54 215.3 135 82.2
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 4.0e-54 215.3 136 80.9
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 1.2e-53 213.8 136 80.1
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 1.2e-53 213.8 136 80.9
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 1.2e-53 213.8 136 80.9
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.2e-53 213.8 136 80.9
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 1.2e-53 213.8 136 80.1
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 2.0e-53 213.0 148 75.0
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 2.0e-53 213.0 136 80.1
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 2.6e-53 212.6 136 80.1
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 2.6e-53 212.6 136 79.4
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 2.6e-53 212.6 136 80.9
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 3.4e-53 212.2 136 79.4
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 3.4e-53 212.2 135 78.5
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 3.4e-53 212.2 136 80.1
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 3.4e-53 212.2 136 79.4
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 3.4e-53 212.2 136 79.4
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 3.4e-53 212.2 136 79.4
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 5.7e-53 211.5 135 79.3
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 9.8e-53 210.7 136 79.4
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 1.3e-52 210.3 136 79.4
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 1.3e-52 210.3 136 80.9
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 1.3e-52 210.3 165 68.5
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 1.7e-52 209.9 136 80.1
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 2.2e-52 209.5 136 78.7
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 2.2e-52 209.5 136 78.7
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 2.8e-52 209.1 148 74.3
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 3.7e-52 208.8 136 77.2
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 4.8e-52 208.4 136 79.4
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 4.8e-52 208.4 136 77.9
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 6.3e-52 208.0 136 77.2
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 6.3e-52 208.0 136 76.5
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 1.1e-51 207.2 136 77.9
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 1.8e-51 206.5 136 77.9
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 2.4e-51 206.1 138 77.5
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 3.1e-51 205.7 136 76.5
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 4.1e-51 205.3 136 76.5
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 5.4e-51 204.9 136 77.2
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 7.0e-51 204.5 136 75.7
Psat7g064160 Pisum sativum HOM05D002496 ORTHO05D002787 7.0e-51 204.5 136 76.5
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 7.0e-51 204.5 136 76.5
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 9.1e-51 204.1 136 77.2
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 1.2e-50 203.8 136 77.2
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 1.2e-50 203.8 136 77.2
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 1.2e-50 203.8 136 77.9
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 1.2e-50 203.8 136 76.5
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 1.2e-50 203.8 136 76.5
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 1.2e-50 203.8 136 76.5
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 2.0e-50 203.0 136 75.0
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 2.0e-50 203.0 136 76.5
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 2.7e-50 202.6 136 77.9
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 4.5e-50 201.8 136 75.0
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 5.9e-50 201.4 136 77.2
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 2.2e-49 199.5 135 75.6
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 2.9e-49 199.1 136 76.5
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 2.9e-49 199.1 136 76.5
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 2.9e-49 199.1 136 76.5
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 2.9e-49 199.1 135 73.3
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 2.9e-49 199.1 135 73.3
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 2.9e-49 199.1 136 74.3
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 6.5e-49 198.0 135 74.1
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 8.5e-49 197.6 145 68.3
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 1.1e-48 197.2 135 71.9
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 1.5e-48 196.8 136 74.3
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 1.9e-48 196.4 135 71.9
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 2.5e-48 196.1 136 73.5
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 2.5e-48 196.1 136 73.5
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 2.5e-48 196.1 136 73.5
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 2.5e-48 196.1 136 75.0
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 3.2e-48 195.7 135 72.6
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 3.2e-48 195.7 136 75.7
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 7.2e-48 194.5 135 71.9
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 7.2e-48 194.5 136 72.1
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 7.2e-48 194.5 135 71.9
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 7.2e-48 194.5 136 72.1
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 6.1e-47 191.4 136 71.3
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 8.0e-47 191.0 136 74.3
BcaC08g43619 Brassica carinata HOM05D002496 ORTHO05D002787 8.0e-47 191.0 136 71.3
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 8.0e-47 191.0 136 71.3
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 8.0e-47 191.0 136 71.3
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 8.0e-47 191.0 136 71.3
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 8.0e-47 191.0 136 71.3
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 8.0e-47 191.0 164 63.4
AUR62040903 Chenopodium quinoa HOM05D002496 ORTHO05D002787 1.4e-46 190.3 145 72.4
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 1.8e-46 189.9 145 71.7
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 4.0e-46 188.7 136 69.9
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 5.2e-46 188.3 137 71.5
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 5.2e-46 188.3 137 71.5
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 6.8e-46 188.0 136 69.9
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 8.8e-46 187.6 136 69.9
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 1.4e-43 180.3 136 69.9
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 7.7e-42 174.5 135 64.4
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 4.4e-37 158.7 136 61.8
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 3.9e-17 92.4 66 72.7
CBR_g23682 Chara braunii HOM05D002496 ORTHO05D002787 1.5e-08 63.9 70 47.1


User provided reference genes

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