Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.6e-230 802.4 406 100.0
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.0e-224 783.1 404 98.0
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 3.0e-224 781.6 404 97.8
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.0e-187 660.2 359 93.6
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.4e-184 649.8 431 79.4
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.3e-171 606.7 398 78.6
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 6.8e-168 594.3 459 70.4
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 5.2e-160 568.2 415 71.6
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.6e-156 556.6 408 69.6
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.3e-155 553.5 409 68.9
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 8.6e-155 550.8 410 70.5
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 4.0e-152 542.0 403 68.7
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 5.8e-151 538.1 424 67.7
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 6.4e-150 534.6 388 69.8
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 2.4e-149 532.7 420 64.8
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 7.1e-149 531.2 413 66.1
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.7e-148 529.3 412 66.5
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.0e-147 527.3 405 65.9
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.7e-147 526.6 406 66.3
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 7.3e-146 521.2 405 65.7
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 9.6e-146 520.8 393 66.4
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 6.9e-144 514.6 416 63.2
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.2e-143 513.8 416 63.0
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 2.0e-143 513.1 396 67.2
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 7.6e-143 511.1 409 65.3
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 7.6e-143 511.1 414 65.2
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.2e-142 509.6 399 66.4
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.2e-142 509.6 393 65.6
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 8.4e-142 507.7 409 63.6
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.2e-141 505.8 394 66.5
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 4.2e-141 505.4 411 63.3
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 5.4e-141 505.0 411 63.3
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 9.3e-141 504.2 418 63.9
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 9.3e-141 504.2 409 63.1
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.2e-140 503.8 409 63.1
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.2e-140 503.8 409 63.1
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 7.8e-140 501.1 391 65.7
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.5e-138 496.9 420 63.3
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 4.3e-138 495.4 402 63.7
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 7.3e-138 494.6 394 64.5
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 9.6e-138 494.2 391 65.0
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 1.3e-137 493.8 413 62.0
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.6e-137 493.4 392 65.3
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 2.1e-137 493.0 390 66.4
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.4e-136 490.3 404 64.4
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 6.9e-136 488.0 413 61.7
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 2.0e-135 486.5 413 64.4
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 2.6e-135 486.1 409 63.3
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 3.4e-135 485.7 410 61.7
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.5e-135 485.3 391 65.0
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.1e-133 480.7 393 62.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.4e-133 480.3 398 62.8
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.9e-133 479.9 408 60.5
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.9e-133 479.9 409 62.1
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.3e-131 473.8 369 65.9
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 5.1e-131 471.9 390 63.6
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 5.1e-131 471.9 391 64.2
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.1e-130 470.7 387 64.3
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 2.1e-129 466.5 409 60.6
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 2.1e-129 466.5 395 61.0
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.8e-129 466.1 424 59.4
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 3.7e-129 465.7 386 64.2
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 6.2e-129 464.9 409 60.9
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.1e-128 464.2 426 58.5
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.8e-128 463.4 413 60.0
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 4.0e-128 462.2 409 59.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 9.0e-128 461.1 412 60.9
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.9e-127 457.6 337 69.4
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 4.9e-126 455.3 409 59.2
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 2.4e-125 453.0 390 59.2
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 4.2e-125 452.2 409 59.2
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 4.2e-125 452.2 393 60.8
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 4.6e-124 448.7 411 58.2
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.5e-122 443.7 354 67.2
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.3e-121 440.7 405 58.8
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 3.7e-121 439.1 397 60.5
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 3.7e-121 439.1 403 58.1
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 4.8e-121 438.7 405 56.5
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 3.1e-120 436.0 311 72.0
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 7.6e-119 431.4 425 53.9
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.7e-118 430.3 342 66.1
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 7.1e-117 424.9 388 58.0
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 7.9e-116 421.4 427 54.8
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.8e-112 410.2 415 54.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.3e-112 408.7 389 54.2
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 8.5e-110 401.4 433 54.3
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.5e-109 398.7 393 53.4
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.3e-106 389.0 363 60.3
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.0e-103 380.2 350 54.6
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.4e-99 367.5 362 55.2
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-98 362.1 330 60.3
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 2.8e-97 359.8 459 42.3
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-95 354.4 337 58.5
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-95 353.6 339 58.1
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.1e-93 347.8 322 54.0
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.2e-93 346.3 297 62.3
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-92 342.0 297 61.6
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-92 342.0 297 61.6
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-92 342.0 297 61.6
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 3.9e-91 339.3 420 43.3
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.5e-90 337.4 394 45.2
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 3.3e-82 309.7 293 58.0
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.4e-80 303.5 205 74.6
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 6.5e-78 295.4 286 57.3
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.2e-68 264.6 187 72.2
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.4e-67 261.2 271 53.1
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.2e-67 259.2 245 57.1
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 2.5e-53 213.8 354 37.9
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 7.1e-32 142.5 178 44.4
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.6e-28 131.3 80 77.5
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.1e-28 129.0 134 50.7
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 9.0e-27 125.6 199 37.7
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.5e-21 107.5 119 48.7
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.2e-20 102.8 158 34.8
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.9e-14 83.6 75 66.7
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.9e-14 83.6 75 66.7
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.9e-14 83.6 75 66.7
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 8.4e-09 65.9 59 57.6
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 7.1e-08 62.8 47 57.4
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 3.9e-06 57.0 60 55.0


User provided reference genes

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