Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020049 Solanum tuberosum HOM05D007833 ORTHO05D009855 1.8e-34 148.7 75 100.0
Nitab4.5_0000759g0080 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.4e-26 122.5 75 85.3
Nitab4.5_0008797g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 3.1e-26 121.3 75 85.3
CAN.G1682.20 Capsicum annuum HOM05D007833 ORTHO05D009855 3.8e-24 114.4 77 81.8
Sopen06g035690 Solanum pennellii HOM05D007833 ORTHO05D009855 1.1e-23 112.8 69 89.9
Solyc06g084300.1 Solanum lycopersicum HOM05D007833 ORTHO05D009855 8.8e-21 103.2 69 82.6
Peaxi162Scf00783g00321 Petunia axillaris HOM05D007833 ORTHO05D009855 1.7e-19 99.0 67 76.1
AUR62036454 Chenopodium quinoa HOM05D007833 ORTHO05D009855 6.5e-16 87.0 50 78.0
Hma1.2p1_0628F.1_g192040 Hydrangea macrophylla HOM05D007833 ORTHO05D009855 8.5e-16 86.7 64 71.9
Lsat_1_v5_gn_9_4081 Lactuca sativa HOM05D007833 ORTHO05D009855 8.5e-16 86.7 67 65.7
Nitab4.5_0001028g0100 Nicotiana tabacum HOM05D007833 ORTHO05D009855 8.5e-16 86.7 75 65.3
PGSC0003DMG400001195 Solanum tuberosum HOM05D007833 ORTHO05D009855 4.2e-15 84.3 70 62.9
ECA247G0823 Erigeron canadensis HOM05D007833 ORTHO05D009855 5.5e-15 84.0 52 80.8
Nitab4.5_0014943g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 5.5e-15 84.0 75 65.3
CSS0012022 Camellia sinensis var. sinensis HOM05D007833 ORTHO05D009855 1.2e-14 82.8 63 65.1
Oeu028084.1 Olea europaea HOM05D007833 ORTHO05D009855 1.6e-14 82.4 67 64.2
AUR62017101 Chenopodium quinoa HOM05D007833 ORTHO05D009855 2.1e-14 82.0 48 77.1
FvH4_2g23750 Fragaria vesca HOM05D007833 ORTHO05D009855 4.7e-14 80.9 63 63.5
FAN24G2170 Fragaria x ananassa HOM05D007833 ORTHO05D009855 4.7e-14 80.9 63 63.5
COL.COLO4_09117 Corchorus olitorius HOM05D003232 ORTHO05D003584 1.8e-13 79.0 62 61.3
Rhsim13G0023900 Rhododendron simsii HOM05D007833 ORTHO05D009855 1.8e-13 79.0 62 67.7
TWI59G0429 Tripterygium wilfordii HOM05D007833 ORTHO05D009855 1.8e-13 79.0 63 65.1
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 2.3e-13 78.6 63 69.8
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 3.0e-13 78.2 59 69.5
Actinidia00743 Actinidia chinensis HOM05D002055 ORTHO05D002120 4.0e-13 77.8 53 73.6
EL10Ac7g17570 Beta vulgaris HOM05D007833 ORTHO05D009855 6.8e-13 77.0 58 65.5
FAN20G1309 Fragaria x ananassa HOM05D007833 ORTHO05D009855 8.8e-13 76.6 63 63.5
Cc01_g19620 Coffea canephora HOM05D007833 ORTHO05D009855 1.2e-12 76.3 75 58.7
Dinv11245 Davidia involucrata HOM05D003232 ORTHO05D003584 1.5e-12 75.9 63 63.5
Potri.005G208100 Populus trichocarpa HOM05D007833 ORTHO05D009855 2.0e-12 75.5 58 65.5
Thecc.01G281600 Theobroma cacao HOM05D007833 ORTHO05D009855 2.6e-12 75.1 59 62.7
Haze_04727 Corylus avellana HOM05D001305 ORTHO05D007147 3.4e-12 74.7 62 62.9
MD11G1287600 Malus domestica HOM05D007833 ORTHO05D009855 3.4e-12 74.7 52 69.2
vmacro02562 Vaccinium macrocarpon HOM05D007833 ORTHO05D009855 3.4e-12 74.7 46 76.1
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 4.4e-12 74.3 63 61.9
Manes.01G208800 Manihot esculenta HOM05D007833 ORTHO05D009855 4.4e-12 74.3 56 66.1
Nn1g02183 Nelumbo nucifera HOM05D007833 ORTHO05D009855 4.4e-12 74.3 45 80.0
Prupe.8G242800 Prunus persica HOM05D007833 ORTHO05D009855 4.4e-12 74.3 52 65.4
CANSAT25G0416 Cannabis sativa HOM05D007833 ORTHO05D009855 7.5e-12 73.6 69 55.1
ClCG07G000180 Citrullus lanatus HOM05D007833 ORTHO05D009855 1.3e-11 72.8 59 61.0
QL12p022146 Quercus lobata HOM05D007833 ORTHO05D009855 1.3e-11 72.8 65 58.5
Ah.04g166580 Amaranthus hybridus HOM05D007833 ORTHO05D009855 2.2e-11 72.0 51 66.7
Duzib133G1414 Durio zibethinus HOM05D007833 ORTHO05D009855 2.2e-11 72.0 73 52.1
Atru.chr5.1399 Acer truncatum HOM05D007833 ORTHO05D009855 3.7e-11 71.2 59 61.0
Cfa006126 Carpinus fangiana HOM05D007833 ORTHO05D009855 3.7e-11 71.2 56 62.5
RcHm_v2.0_Chr6g0291241 Rosa chinensis HOM05D007833 ORTHO05D009855 3.7e-11 71.2 51 70.6
Eucgr.K03378 Eucalyptus grandis HOM05D007833 ORTHO05D009855 6.3e-11 70.5 56 67.9
Peaxi162Scf00570g00076 Petunia axillaris HOM05D007833 ORTHO05D009855 8.3e-11 70.1 72 52.8
Sc24g0003060 Simmondsia chinensis HOM05D007833 ORTHO05D009855 8.3e-11 70.1 46 71.7
Duzib138G0003 Durio zibethinus HOM05D007833 ORTHO05D009855 1.1e-10 69.7 49 67.3
Glyma.19G154700 Glycine max HOM05D007833 ORTHO05D009855 1.4e-10 69.3 50 68.0
CiPaw.07G092800 Carya illinoinensis HOM05D007833 ORTHO05D009855 1.8e-10 68.9 44 77.3
Ciclev10023167m.g Citrus clementina HOM05D007833 ORTHO05D009855 3.1e-10 68.2 44 72.7
Glyma.17G209300 Glycine max HOM05D007833 ORTHO05D009855 3.1e-10 68.2 50 68.0
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 3.1e-10 68.2 47 68.1
Gohir.A08G068400 Gossypium hirsutum HOM05D007833 ORTHO05D009855 4.1e-10 67.8 44 70.5
Sed0020364 Sechium edule HOM05D007833 ORTHO05D009855 4.1e-10 67.8 68 51.5
Gohir.D08G076800 Gossypium hirsutum HOM05D007833 ORTHO05D009855 7.0e-10 67.0 66 56.1
Gorai.004G081500 Gossypium raimondii HOM05D007833 ORTHO05D009855 7.0e-10 67.0 66 56.1
Migut.N02161 Erythranthe guttata HOM05D007833 ORTHO05D009855 9.1e-10 66.6 45 73.3
Potri.002G054700 Populus trichocarpa HOM05D007833 ORTHO05D009855 9.1e-10 66.6 67 53.7
C07p46950 Brassica napus HOM05D000938 ORTHO05D001451 1.2e-09 66.2 47 68.1
BolC7t45211H Brassica oleracea HOM05D000938 ORTHO05D001451 1.2e-09 66.2 47 68.1
CsaV3_6G037060 Cucumis sativus L. HOM05D007833 ORTHO05D009855 1.2e-09 66.2 51 60.8
BcaC06g32911 Brassica carinata HOM05D007833 ORTHO05D009855 1.6e-09 65.9 52 63.5
BcaC06g33387 Brassica carinata HOM05D007833 ORTHO05D009855 1.6e-09 65.9 52 63.5
Carub.0005s1877 Capsella rubella HOM05D007833 ORTHO05D009855 2.0e-09 65.5 58 58.6
Phvul.001G149800 Phaseolus vulgaris HOM05D007833 ORTHO05D009855 2.0e-09 65.5 43 74.4
Sp5g09880 Schrenkiella parvula HOM05D007833 ORTHO05D009855 2.0e-09 65.5 61 59.0
Glyma.03G152200 Glycine max HOM05D007833 ORTHO05D009855 2.7e-09 65.1 67 58.2
CARHR162190 Cardamine hirsuta HOM05D007833 ORTHO05D009855 3.5e-09 64.7 51 62.7
A03p48860 Brassica napus HOM05D000938 ORTHO05D001451 4.5e-09 64.3 47 66.0
BraA03t13987Z Brassica rapa HOM05D000938 ORTHO05D001451 4.5e-09 64.3 47 66.0
MD03G1267100 Malus domestica HOM05D007833 ORTHO05D009855 5.9e-09 63.9 54 64.8
AT3G52420 Arabidopsis thaliana HOM05D007833 ORTHO05D009855 7.7e-09 63.5 51 60.8
Potri.017G127350 Populus trichocarpa HOM05D007833 ORTHO05D009855 1.3e-08 62.8 63 55.6
PGR044G2487 Punica granatum HOM05D007833 ORTHO05D009855 1.3e-08 62.8 37 75.7
Lj1g0020293 Lotus japonicus HOM05D007833 ORTHO05D009855 1.7e-08 62.4 43 69.8
AL5G33070 Arabidopsis lyrata HOM05D007833 ORTHO05D009855 2.2e-08 62.0 64 54.7
SalBow6G6192 Salvia bowleyana HOM05D007833 ORTHO05D009855 2.2e-08 62.0 66 51.5
Psat3g064960 Pisum sativum HOM05D007833 ORTHO05D009855 2.9e-08 61.6 66 51.5
Medtr7g094710 Medicago truncatula HOM05D007833 ORTHO05D009855 3.8e-08 61.2 43 69.8
arahy.Tifrunner.gnm1.ann1.1H9ESI Arachis hypogaea HOM05D007833 ORTHO05D009855 8.5e-08 60.1 62 51.6
HPP92_007464 Vanilla planifolia HOM05D027844 ORTHO05D009855 8.5e-08 60.1 68 45.6
Thhalv10010886m.g Eutrema salsugineum HOM05D007833 ORTHO05D009855 1.5e-07 59.3 38 73.7
TPR.G26603 Trifolium pratense HOM05D007833 ORTHO05D009855 1.5e-07 59.3 43 67.4
Cpa.g.sc52.17 Carica papaya HOM05D007833 ORTHO05D009855 1.9e-07 58.9 47 57.4
Migut.K01062 Erythranthe guttata HOM05D007833 ORTHO05D009855 3.2e-07 58.2 45 66.7
Ca_08575_v3 Cicer arietinum L. HOM05D007833 ORTHO05D009855 4.2e-07 57.8 45 66.7
AUR62036455 Chenopodium quinoa HOM05D045935 ORTHO05D009855 2.1e-06 55.5 39 64.1
HanXRQChr10g0282781 Helianthus annuus HOM05D007833 ORTHO05D009855 2.1e-06 55.5 41 73.2
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 6.1e-06 53.9 51 54.9
unitig_0.g1010 Utricularia gibba HOM05D007833 ORTHO05D009855 6.1e-06 53.9 56 50.0


User provided reference genes

Program Settings