Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 1.4e-185 652.9 344 100.0
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 4.4e-176 621.3 342 96.8
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 3.2e-174 615.1 343 95.6
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 3.0e-164 582.0 336 91.4
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 8.1e-162 573.9 346 89.0
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 5.4e-150 534.6 370 79.2
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.1e-141 506.1 276 95.3
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 3.0e-132 475.7 336 75.0
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 5.6e-131 471.5 339 74.9
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.3e-130 470.3 334 76.0
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 2.1e-130 469.5 335 74.0
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 2.8e-130 469.2 334 74.9
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 2.8e-130 469.2 335 73.7
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 2.8e-130 469.2 314 78.0
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 6.9e-129 464.5 300 79.0
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 9.0e-129 464.2 334 73.4
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.2e-128 463.8 306 77.5
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 1.5e-128 463.4 334 74.0
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 2.0e-128 463.0 335 72.8
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 2.6e-128 462.6 337 72.7
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 4.5e-128 461.8 306 78.1
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 5.8e-128 461.5 336 73.5
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 5.8e-128 461.5 306 77.8
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 1.3e-127 460.3 302 77.8
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 1.7e-127 459.9 336 73.2
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 2.2e-127 459.5 302 77.8
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 4.9e-127 458.4 332 72.6
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 6.5e-127 458.0 334 71.6
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 6.5e-127 458.0 302 77.8
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 1.4e-126 456.8 336 71.7
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 1.4e-126 456.8 335 72.8
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.5e-126 456.1 335 71.6
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 2.5e-126 456.1 334 71.9
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 7.1e-126 454.5 336 72.3
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 1.6e-125 453.4 338 71.6
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 3.5e-125 452.2 333 70.9
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 4.6e-125 451.8 335 72.5
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 6.0e-125 451.4 306 75.5
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 2.3e-124 449.5 310 77.4
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 3.0e-124 449.1 334 71.3
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 8.7e-124 447.6 303 76.6
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 2.5e-123 446.0 300 75.3
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 2.5e-123 446.0 333 70.3
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 4.3e-123 445.3 300 75.7
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 1.3e-122 443.7 300 75.3
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 1.6e-122 443.4 301 76.4
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 2.1e-122 443.0 303 75.2
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 2.8e-122 442.6 300 75.0
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 3.7e-122 442.2 300 75.3
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 3.7e-122 442.2 300 74.7
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 4.8e-122 441.8 300 74.7
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.1e-121 440.7 302 75.5
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 2.4e-121 439.5 300 74.7
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 3.1e-121 439.1 304 72.4
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 6.9e-121 438.0 341 71.6
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 1.2e-120 437.2 302 74.2
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.2e-120 437.2 338 67.2
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.2e-120 437.2 306 74.5
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 1.5e-120 436.8 300 74.3
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.5e-120 436.8 335 69.6
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 2.0e-120 436.4 302 74.8
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 2.0e-120 436.4 302 74.8
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 4.5e-120 435.3 335 70.1
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.8e-120 434.9 316 74.4
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 2.2e-119 433.0 302 74.2
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 2.9e-119 432.6 303 74.6
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 2.9e-119 432.6 333 70.6
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 5.0e-119 431.8 315 74.0
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 6.5e-119 431.4 336 68.2
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 7.2e-118 427.9 334 68.0
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 9.3e-118 427.6 334 68.0
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 1.6e-117 426.8 341 68.0
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 2.1e-117 426.4 351 67.8
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 3.5e-117 425.6 332 70.5
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.0e-116 424.1 334 68.0
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 1.8e-116 423.3 357 65.5
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 3.9e-116 422.2 338 67.8
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 1.1e-115 420.6 335 68.1
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 2.5e-115 419.5 342 69.3
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 2.5e-115 419.5 278 77.3
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 4.3e-115 418.7 342 69.3
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 8.2e-114 414.5 365 63.6
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 8.2e-114 414.5 317 71.6
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 9.0e-113 411.0 336 66.1
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 9.0e-113 411.0 332 69.0
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 1.2e-112 410.6 334 64.4
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 7.7e-112 407.9 336 65.2
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 7.7e-112 407.9 347 66.3
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 1.0e-111 407.5 280 74.3
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 2.2e-111 406.4 308 68.2
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 6.5e-111 404.8 278 74.5
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 2.7e-109 399.4 401 58.6
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.6e-109 399.1 332 65.7
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 3.0e-108 396.0 310 70.0
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 1.8e-105 386.7 338 61.8
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 5.0e-103 378.6 268 73.9
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 6.5e-103 378.3 281 69.8
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 1.1e-102 377.5 300 66.7
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 4.2e-102 375.6 266 73.3
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 6.1e-101 371.7 246 79.3
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.4e-100 370.5 336 62.8
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 2.2e-98 363.2 352 56.2
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 6.3e-98 361.7 322 59.9
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 7.7e-96 354.8 305 64.9
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 2.5e-94 349.7 274 68.2
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 6.3e-90 335.1 248 69.0
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 2.0e-88 330.1 332 53.0
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.7e-87 327.0 241 75.1
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 6.5e-87 325.1 213 79.3
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 3.2e-86 322.8 213 77.5
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 8.3e-82 308.1 196 78.6
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 1.7e-79 300.4 279 58.4
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 5.2e-76 288.9 195 76.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.5e-72 276.2 206 70.9
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 6.8e-68 261.9 169 79.3
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 4.6e-64 249.2 169 75.1
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 2.3e-63 246.9 315 43.8
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 9.8e-59 231.5 169 72.2
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 5.2e-44 182.6 278 41.7
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 9.2e-41 171.8 149 63.1
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 9.6e-38 161.8 113 72.6
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 7.1e-33 145.6 103 74.8
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.4e-25 121.3 93 64.5
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 4.2e-25 119.8 100 64.0
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 4.6e-24 116.3 113 55.8
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 8.7e-23 112.1 79 72.2
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 7.4e-22 109.0 246 35.8
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 3.6e-21 106.7 99 59.6
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.9e-20 102.4 118 55.9
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 4.5e-19 99.8 64 76.6
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-17 94.7 62 80.6
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.4e-17 94.0 62 77.4
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.5e-17 92.8 61 75.4
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.3e-17 92.0 62 77.4
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 1.5e-14 84.7 109 45.0
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.1e-13 80.9 56 76.8
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 2.8e-13 80.5 84 47.6
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.8e-13 80.5 55 78.2
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 4.8e-13 79.7 81 48.1
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 3.8e-10 70.1 37 78.4
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 3.2e-09 67.0 42 78.6
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 2.7e-08 63.9 53 64.2
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 4.6e-08 63.2 35 88.6
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 4.6e-08 63.2 35 88.6
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 1.8e-07 61.2 135 35.6
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 1.9e-06 57.8 40 72.5


User provided reference genes

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