Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019018 Solanum tuberosum HOM05D002575 ORTHO05D009115 2.1e-109 399.1 207 100.0
Sopen06g017550 Solanum pennellii HOM05D002575 ORTHO05D009115 1.3e-101 373.2 208 92.3
Solyc06g051570.4 Solanum lycopersicum HOM05D002575 ORTHO05D009115 6.2e-101 370.9 208 91.8
CAN.G19.8 Capsicum annuum HOM05D002575 ORTHO05D009115 6.3e-93 344.4 208 87.0
Peaxi162Scf00825g00235 Petunia axillaris HOM05D002575 ORTHO05D009115 9.7e-86 320.5 206 77.7
Nitab4.5_0000666g0080 Nicotiana tabacum HOM05D002575 ORTHO05D009115 1.6e-80 303.1 178 84.3
Dinv17995 Davidia involucrata HOM05D002575 ORTHO05D009115 1.4e-73 280.0 202 65.3
Cfa001317 Carpinus fangiana HOM05D002575 ORTHO05D009115 3.9e-71 271.9 202 66.8
Haze_17227 Corylus avellana HOM05D002575 ORTHO05D009115 3.3e-70 268.9 205 66.3
ECA238G2639 Erigeron canadensis HOM05D002575 ORTHO05D009115 9.7e-70 267.3 207 60.4
TAR636G1371 Trochodendron aralioides HOM05D000781 ORTHO05D000643 1.3e-69 266.9 204 61.3
Cpa.g.sc19.173 Carica papaya HOM05D002575 ORTHO05D009115 1.1e-68 263.8 203 61.1
Cc02_g06500 Coffea canephora HOM05D002575 ORTHO05D009115 7.0e-68 261.2 202 63.4
HanXRQChr07g0202861 Helianthus annuus HOM05D002575 ORTHO05D009115 3.5e-67 258.8 207 60.4
FAN01G0126 Fragaria x ananassa HOM05D002575 ORTHO05D009115 4.5e-67 258.5 206 61.2
Oeu028342.1 Olea europaea HOM05D002575 ORTHO05D009115 4.5e-67 258.5 205 64.4
RcHm_v2.0_Chr1g0370241 Rosa chinensis HOM05D002575 ORTHO05D009115 5.9e-67 258.1 206 62.1
DCAR_024827 Daucus carota HOM05D002575 ORTHO05D009115 1.3e-66 256.9 202 62.9
Prupe.2G250200 Prunus persica HOM05D002575 ORTHO05D009115 1.3e-66 256.9 206 60.2
VMungo1383G0855 Vigna mungo HOM05D002575 ORTHO05D009115 1.3e-66 256.9 206 61.2
GSVIVG01032817001 Vitis vinifera HOM05D002575 ORTHO05D009115 1.7e-66 256.5 203 62.1
Aqoxy4G02552 Aquilegia oxysepala HOM05D002575 ORTHO05D009115 2.9e-66 255.8 203 61.6
Thecc.10G016000 Theobroma cacao HOM05D002575 ORTHO05D009115 2.9e-66 255.8 203 60.1
MD00G1166700 Malus domestica HOM05D002575 ORTHO05D009115 8.5e-66 254.2 206 60.2
Rhsim03G0143800 Rhododendron simsii HOM05D002575 ORTHO05D009115 8.5e-66 254.2 202 60.4
Medtr3g070780 Medicago truncatula HOM05D002575 ORTHO05D009115 1.5e-65 253.4 203 57.6
Phvul.001G243400 Phaseolus vulgaris HOM05D002575 ORTHO05D009115 1.5e-65 253.4 202 61.4
FvH4_7g24480 Fragaria vesca HOM05D002575 ORTHO05D009115 1.9e-65 253.1 204 60.8
FAN06G3971 Fragaria x ananassa HOM05D000781 ORTHO05D009115 2.5e-65 252.7 203 61.6
TWI73G1175 Tripterygium wilfordii HOM05D002575 ORTHO05D009115 2.5e-65 252.7 203 61.1
Nn2g10843 Nelumbo nucifera HOM05D002575 ORTHO05D009115 4.2e-65 251.9 203 59.1
Lsat_1_v5_gn_2_123440 Lactuca sativa HOM05D002575 ORTHO05D009115 5.5e-65 251.5 207 57.5
Lj1A955G80 Lonicera japonica HOM05D002575 ORTHO05D009115 7.2e-65 251.1 212 60.4
PSO384G3900 Papaver somniferum HOM05D002575 ORTHO05D009115 7.2e-65 251.1 203 59.1
PGR044G2457 Punica granatum HOM05D002575 ORTHO05D009115 7.2e-65 251.1 207 60.9
Psat5g128320 Pisum sativum HOM05D002575 ORTHO05D009115 1.6e-64 250.0 202 56.4
Duzib128G0837 Durio zibethinus HOM05D002575 ORTHO05D009115 2.1e-64 249.6 203 59.6
arahy.Tifrunner.gnm1.ann1.DA4QY1 Arachis hypogaea HOM05D002575 ORTHO05D009115 4.7e-64 248.4 202 56.9
TPR.G11205 Trifolium pratense HOM05D002575 ORTHO05D009115 1.4e-63 246.9 202 56.9
SalBow6G5788 Salvia bowleyana HOM05D002575 ORTHO05D009115 1.8e-63 246.5 215 58.1
Ca_15127_v3 Cicer arietinum L. HOM05D002575 ORTHO05D009115 2.3e-63 246.1 202 56.9
PSO339G0934 Papaver somniferum HOM05D002575 ORTHO05D009115 4.0e-63 245.4 203 58.1
Potri.010G188700 Populus trichocarpa HOM05D002575 ORTHO05D009115 4.0e-63 245.4 203 57.6
Gohir.A06G163400 Gossypium hirsutum HOM05D002575 ORTHO05D009115 6.7e-63 244.6 204 59.8
Sc10g0002360 Simmondsia chinensis HOM05D002575 ORTHO05D009115 6.7e-63 244.6 206 58.7
arahy.Tifrunner.gnm1.ann1.1Q70G5 Arachis hypogaea HOM05D002575 ORTHO05D009115 8.8e-63 244.2 202 56.4
Gohir.D06G169000 Gossypium hirsutum HOM05D002575 ORTHO05D009115 8.8e-63 244.2 203 58.1
Gorai.010G197800 Gossypium raimondii HOM05D002575 ORTHO05D009115 8.8e-63 244.2 203 58.1
ClCG11G006140 Citrullus lanatus HOM05D002575 ORTHO05D009115 1.5e-62 243.4 207 58.0
Nitab4.5_0001032g0040 Nicotiana tabacum HOM05D002575 ORTHO05D009115 1.5e-62 243.4 202 66.3
vmacro06970 Vaccinium macrocarpon HOM05D002575 ORTHO05D009115 2.6e-62 242.7 264 49.6
Hund13865 Selenicereus undatus HOM05D002575 ORTHO05D009115 3.3e-62 242.3 206 57.8
Ciclev10030684m.g Citrus clementina HOM05D002575 ORTHO05D009115 4.4e-62 241.9 202 58.4
Lalb_Chr23g0276911 Lupinus albus HOM05D002575 ORTHO05D009115 4.4e-62 241.9 207 57.0
Lj6g0019077 Lotus japonicus HOM05D002575 ORTHO05D009115 5.7e-62 241.5 209 56.9
SGA_v2.0_scaffold60G20999 Striga asiatica HOM05D002575 ORTHO05D009115 2.2e-61 239.6 207 58.0
MSTRG.27331 Avicennia marina HOM05D002575 ORTHO05D009115 8.2e-61 237.7 209 57.4
CsaV3_6G001850 Cucumis sativus L. HOM05D002575 ORTHO05D009115 1.1e-60 237.3 207 57.5
CARHR207620 Cardamine hirsuta HOM05D002575 ORTHO05D009115 1.4e-60 236.9 208 59.1
MELO3C008297.2 Cucumis melo HOM05D002575 ORTHO05D009115 9.1e-60 234.2 207 56.5
THA.LOC104816547 Tarenaya hassleriana HOM05D002575 ORTHO05D009115 2.0e-59 233.0 208 53.4
Glyma.11G230200 Glycine max HOM05D002575 ORTHO05D009115 3.5e-59 232.3 206 55.8
Sp6g37233 Schrenkiella parvula HOM05D002575 ORTHO05D009115 3.5e-59 232.3 208 54.8
Eucgr.J00206 Eucalyptus grandis HOM05D002575 ORTHO05D009115 5.9e-59 231.5 206 56.8
Manes.10G012200 Manihot esculenta HOM05D002575 ORTHO05D009115 2.2e-58 229.6 203 58.6
Sed0014947 Sechium edule HOM05D002575 ORTHO05D009115 2.9e-58 229.2 203 57.1
Ah.16g103570 Amaranthus hybridus HOM05D002575 ORTHO05D009115 1.1e-57 227.3 206 53.4
CiPaw.01G298700 Carya illinoinensis HOM05D002575 ORTHO05D009115 3.2e-57 225.7 203 56.2
QL08p063209 Quercus lobata HOM05D002575 ORTHO05D009115 1.2e-56 223.8 303 42.6
CSS0037879 Camellia sinensis var. sinensis HOM05D002575 ORTHO05D009115 8.0e-56 221.1 122 78.7
AUR62012252 Chenopodium quinoa HOM05D002575 ORTHO05D009115 5.2e-55 218.4 206 52.4
AUR62022885 Chenopodium quinoa HOM05D002575 ORTHO05D009115 3.4e-54 215.7 207 54.6
EL10Ac2g04832 Beta vulgaris HOM05D002575 ORTHO05D009115 1.3e-53 213.8 129 73.6
AT5G05660 Arabidopsis thaliana HOM05D002575 ORTHO05D009115 6.3e-53 211.5 208 54.3
Os01g0158900 Oryza sativa ssp. japonica HOM05D002575 ORTHO05D009115 1.8e-52 209.9 202 51.5
Carub.0006s0455 Capsella rubella HOM05D002575 ORTHO05D009115 2.4e-52 209.5 208 55.3
Thhalv10012642m.g Eutrema salsugineum HOM05D002575 ORTHO05D009115 1.2e-51 207.2 208 55.3
HPP92_013879 Vanilla planifolia HOM05D002575 ORTHO05D009115 1.6e-51 206.8 205 51.7
HPP92_013887 Vanilla planifolia HOM05D002575 ORTHO05D009115 3.5e-51 205.7 205 51.2
Sabra10G0145400 Salix brachista HOM05D002575 ORTHO05D009115 2.3e-50 203.0 285 40.7
CDE02G0569 Ceratophyllum demersum HOM05D002575 ORTHO05D009115 2.9e-50 202.6 208 48.6
BolC9t59881H Brassica oleracea HOM05D002575 ORTHO05D009115 8.6e-50 201.1 209 51.7
MBI03_g37290_MAGBIO Magnolia biondii HOM05D002575 ORTHO05D009115 1.5e-49 200.3 128 68.0
Aa31LG11G6680 Aethionema arabicum HOM05D002575 ORTHO05D009115 1.9e-49 199.9 208 52.9
BraA10t45111Z Brassica rapa HOM05D002575 ORTHO05D009115 2.5e-49 199.5 208 54.3
Glyma.18G027000 Glycine max HOM05D002575 ORTHO05D009115 2.5e-49 199.5 156 59.6
AL6G15550 Arabidopsis lyrata HOM05D002575 ORTHO05D009115 9.5e-49 197.6 208 52.4
A10p30700 Brassica napus HOM05D002575 ORTHO05D009115 9.5e-49 197.6 208 53.8
ATR0681G044 Amborella trichopoda HOM05D002575 ORTHO05D009115 3.6e-48 195.7 213 48.8
BcaC06g32271 Brassica carinata HOM05D002575 ORTHO05D009115 6.8e-47 191.4 209 53.1
C09p71190 Brassica napus HOM05D002575 ORTHO05D009115 8.9e-47 191.0 209 53.1
Migut.F00683 Erythranthe guttata HOM05D002575 ORTHO05D009115 2.3e-39 166.4 207 44.0
MD07G1222000 Malus domestica HOM05D002575 ORTHO05D009115 1.2e-32 144.1 143 52.4
Pp3c2_24250 Physcomitrium patens HOM05D002575 ORTHO05D009115 1.2e-32 144.1 211 41.7
Actinidia33924 Actinidia chinensis HOM05D002575 ORTHO05D009115 2.2e-29 133.3 190 42.1
Actinidia29702 Actinidia chinensis HOM05D002575 ORTHO05D009115 4.1e-28 129.0 69 78.3
Mapoly0154s0047 Marchantia polymorpha HOM05D002575 ORTHO05D009115 5.4e-28 128.6 207 36.2
Zm00001eb336160 Zea mays HOM05D002575 ORTHO05D009115 1.3e-21 107.5 57 73.7
SMO230G0013 Selaginella moellendorffii HOM05D002575 ORTHO05D009115 6.4e-21 105.1 129 43.4
CBR_g3071 Chara braunii HOM05D002575 ORTHO05D009115 3.0e-18 96.3 124 34.7
COL.COLO4_25727 Corchorus olitorius HOM05D002575 ORTHO05D009115 3.9e-18 95.9 105 49.5
Atru.chr12.35 Acer truncatum HOM05D002575 ORTHO05D009115 6.2e-16 88.6 185 37.3
Cre03.g163200 Chlamydomonas reinhardtii HOM05D002575 ORTHO05D009115 1.3e-13 80.9 94 41.5
SEGI_36190 Sequoiadendron giganteum HOM05D002575 ORTHO05D009115 1.1e-07 61.2 101 37.6


User provided reference genes

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