Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 5.1e-87 324.3 157 100.0
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 1.2e-83 313.2 157 96.2
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 2.4e-73 278.9 157 87.3
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 7.4e-70 267.3 157 84.1
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 3.5e-64 248.4 125 96.0
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 7.6e-59 230.7 131 82.4
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 1.2e-56 223.4 158 65.8
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 3.6e-56 221.9 160 66.2
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 2.5e-54 215.7 160 63.1
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 1.6e-53 213.0 163 65.0
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 8.2e-53 210.7 164 64.0
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 4.1e-52 208.4 162 62.3
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 5.3e-52 208.0 158 62.0
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 5.3e-52 208.0 162 64.2
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 5.3e-52 208.0 162 63.6
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 2.6e-51 205.7 163 60.7
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 3.4e-51 205.3 162 61.1
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 4.5e-51 204.9 164 66.5
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 4.5e-51 204.9 164 61.6
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 4.5e-51 204.9 166 59.0
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 2.2e-50 202.6 163 60.7
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 3.8e-50 201.8 166 59.6
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 5.0e-50 201.4 164 59.8
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 6.5e-50 201.1 159 60.4
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 6.5e-50 201.1 163 60.7
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 8.5e-50 200.7 159 60.4
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 8.5e-50 200.7 159 60.4
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 1.1e-49 200.3 163 60.1
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 1.1e-49 200.3 166 59.6
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 2.5e-49 199.1 162 62.3
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 3.2e-49 198.7 162 59.9
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 4.2e-49 198.4 163 60.7
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 7.2e-49 197.6 161 62.1
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 7.2e-49 197.6 164 61.0
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 9.4e-49 197.2 162 59.3
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 1.2e-48 196.8 157 61.8
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 1.6e-48 196.4 162 60.5
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 2.1e-48 196.1 161 60.9
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 3.6e-48 195.3 163 59.5
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 6.1e-48 194.5 161 59.6
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 7.9e-48 194.1 161 59.6
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 7.9e-48 194.1 158 60.8
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 7.9e-48 194.1 167 56.9
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 7.9e-48 194.1 157 65.0
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 1.0e-47 193.7 164 61.0
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 1.4e-47 193.4 166 60.8
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 5.1e-47 191.4 163 60.7
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 6.7e-47 191.0 166 58.4
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 7.4e-46 187.6 193 51.8
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 4.8e-45 184.9 157 56.7
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 1.8e-44 183.0 159 56.6
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 4.1e-44 181.8 159 59.1
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 4.1e-44 181.8 157 58.6
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 4.1e-44 181.8 159 58.5
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 4.1e-44 181.8 167 57.5
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 5.9e-43 177.9 153 58.8
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 2.9e-42 175.6 131 64.9
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 5.0e-42 174.9 136 62.5
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 5.0e-42 174.9 163 55.2
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 1.9e-41 172.9 152 56.6
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 9.4e-41 170.6 176 48.9
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 3.6e-40 168.7 137 62.0
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 3.6e-40 168.7 111 67.6
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 1.0e-39 167.2 186 51.1
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 1.4e-39 166.8 162 52.5
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 1.1e-38 163.7 135 60.7
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 8.2e-37 157.5 131 59.5
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 1.2e-35 153.7 133 56.4
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 3.8e-34 148.7 130 57.7
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 6.5e-34 147.9 129 59.7
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 9.4e-33 144.1 162 48.8
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 4.5e-27 125.2 94 59.6
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 1.3e-26 123.6 115 50.4
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 1.7e-26 123.2 188 37.8
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 3.6e-24 115.5 80 61.2
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 1.8e-23 113.2 150 46.0
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 2.3e-23 112.8 164 39.0
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 2.8e-21 105.9 80 57.5
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 7.2e-17 91.3 82 61.0
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 4.0e-15 85.5 84 61.9
Mapoly0060s0027 Marchantia polymorpha HOM05D006479 ORTHO05D008310 4.7e-08 62.0 83 37.3
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 1.0e-07 60.8 90 36.7
SEGI_09240 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 5.2e-07 58.5 119 29.4
ClCG11G016070 Citrullus lanatus HOM05D005374 ORTHO05D006534 1.5e-06 57.0 91 35.2
Sed0016570 Sechium edule HOM05D005374 ORTHO05D006534 2.0e-06 56.6 91 35.2


User provided reference genes

Program Settings