Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 1.4e-93 346.7 234 100.0
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 4.3e-90 335.1 234 97.4
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 1.1e-88 330.5 234 96.2
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 3.6e-81 305.4 238 91.2
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 9.3e-77 290.8 239 88.7
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 7.9e-76 287.7 239 88.3
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 1.6e-68 263.5 238 81.9
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 1.9e-66 256.5 238 79.0
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 6.9e-64 248.1 262 61.5
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 1.5e-63 246.9 240 76.2
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 1.5e-63 246.9 239 75.3
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 3.4e-63 245.7 234 78.6
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 1.7e-62 243.4 238 78.6
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 2.2e-62 243.0 234 77.4
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 8.4e-62 241.1 249 65.1
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.4e-61 240.4 238 75.6
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 1.9e-61 240.0 237 76.4
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 2.5e-61 239.6 238 78.6
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 2.5e-61 239.6 229 79.5
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 2.5e-61 239.6 234 77.8
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 3.2e-61 239.2 232 78.4
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 3.2e-61 239.2 238 77.7
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 7.1e-61 238.0 233 79.4
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 9.3e-61 237.7 155 76.8
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 9.3e-61 237.7 238 76.5
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 1.6e-60 236.9 240 75.0
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 2.1e-60 236.5 239 76.2
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 6.0e-60 235.0 238 76.9
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 6.0e-60 235.0 238 76.1
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 7.9e-60 234.6 240 75.0
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 1.0e-59 234.2 193 88.6
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 1.0e-59 234.2 254 72.0
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 1.3e-59 233.8 199 87.9
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 1.3e-59 233.8 233 76.0
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 2.3e-59 233.0 234 77.4
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 2.3e-59 233.0 234 77.4
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 3.0e-59 232.6 223 79.4
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 6.7e-59 231.5 238 75.2
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.5e-58 230.3 234 76.9
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 1.9e-58 229.9 243 73.3
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 1.9e-58 229.9 234 75.6
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 2.5e-58 229.6 238 73.9
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 2.5e-58 229.6 239 74.9
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.3e-58 229.2 235 78.3
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 4.3e-58 228.8 241 73.9
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 9.6e-58 227.6 214 80.8
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 1.3e-57 227.3 238 74.4
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 2.8e-57 226.1 233 77.7
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 2.8e-57 226.1 233 76.4
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.7e-57 225.7 199 86.4
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 4.8e-57 225.3 237 75.9
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 6.3e-57 224.9 202 82.7
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 6.3e-57 224.9 234 75.2
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 6.3e-57 224.9 200 85.5
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 1.1e-56 224.2 234 74.8
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 1.4e-56 223.8 207 80.2
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.1e-56 222.2 243 73.7
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.1e-56 222.2 200 59.5
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 4.1e-56 222.2 201 83.6
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 5.3e-56 221.9 237 74.3
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 2.0e-55 219.9 216 78.2
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 2.0e-55 219.9 157 70.7
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 1.4e-53 213.8 242 74.0
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.5e-53 213.0 200 67.5
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 3.2e-53 212.6 223 74.9
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 3.2e-53 212.6 239 73.6
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 3.2e-53 212.6 235 71.1
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 3.2e-53 212.6 213 77.0
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 5.5e-53 211.8 211 80.1
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 5.5e-53 211.8 235 72.8
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 1.2e-52 210.7 197 82.2
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.2e-52 210.7 235 71.9
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 2.1e-52 209.9 238 71.8
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 2.7e-52 209.5 240 69.6
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 7.9e-52 208.0 238 71.8
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 1.0e-51 207.6 242 71.5
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 1.0e-51 207.6 242 71.9
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 1.0e-51 207.6 239 71.5
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 1.0e-51 207.6 241 72.2
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 1.3e-51 207.2 238 61.3
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 1.8e-51 206.8 234 70.5
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 2.3e-51 206.5 237 71.7
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 2.3e-51 206.5 185 85.9
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 3.0e-51 206.1 243 70.4
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.0e-51 206.1 234 72.6
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 2.5e-50 203.0 205 78.5
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-49 200.7 200 56.5
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 1.6e-49 200.3 197 80.2
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 3.7e-49 199.1 198 77.8
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 8.2e-49 198.0 207 53.6
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 8.2e-49 198.0 207 53.6
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.1e-48 196.1 146 69.2
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 4.1e-48 195.7 198 77.3
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.3e-48 195.3 146 69.2
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.3e-48 195.3 146 69.2
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 6.9e-48 194.9 228 71.9
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 1.2e-47 194.1 228 71.9
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-47 193.0 146 68.5
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 5.9e-47 191.8 237 68.8
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 1.0e-46 191.0 235 70.6
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.0e-46 191.0 146 67.8
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.3e-46 190.7 226 71.2
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 2.9e-46 189.5 207 75.8
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 2.9e-46 189.5 207 75.8
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 2.9e-46 189.5 207 75.8
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 1.1e-45 187.6 184 82.6
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 1.1e-45 187.6 184 82.6
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.1e-45 187.6 148 64.9
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.9e-45 186.8 144 64.6
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 4.2e-45 185.7 236 67.4
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 5.5e-45 185.3 206 75.7
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.6e-44 182.6 241 67.2
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 7.9e-44 181.4 123 69.9
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 1.5e-42 177.2 220 69.5
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 9.7e-42 174.5 158 89.9
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 1.3e-41 174.1 200 71.5
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.7e-41 173.7 157 91.7
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.7e-41 173.7 242 47.9
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 3.7e-41 172.6 165 86.7
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 4.8e-41 172.2 237 65.8
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 3.8e-38 162.5 240 65.0
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.5e-38 161.8 234 48.7
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 1.9e-37 160.2 139 61.2
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 4.4e-34 149.1 207 59.9
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 7.4e-34 148.3 156 81.4
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.2e-33 146.7 77 89.6
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 6.3e-33 145.2 106 68.9
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 1.9e-21 107.1 64 76.6
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 3.6e-12 76.3 110 81.8
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 8.0e-12 75.1 157 43.3
Cpa.g.sc3.109 Carica papaya HOM05D005832 ORTHO05D007117 7.5e-10 68.6 81 48.1


User provided reference genes

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