Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017740 Solanum tuberosum HOM05D008226 ORTHO05D010321 5.8e-53 210.7 112 100.0
Solyc02g081540.2 Solanum lycopersicum HOM05D008226 ORTHO05D010321 6.0e-50 200.7 110 96.4
Sopen02g026170 Solanum pennellii HOM05D008226 ORTHO05D010321 1.0e-49 199.9 110 96.4
CAN.G809.80 Capsicum annuum HOM05D008226 ORTHO05D010321 6.7e-41 170.6 112 83.9
Nitab4.5_0000108g0030 Nicotiana tabacum HOM05D008226 ORTHO05D010321 3.9e-33 144.8 114 72.8
Nitab4.5_0006392g0020 Nicotiana tabacum HOM05D008226 ORTHO05D010321 5.7e-32 141.0 113 72.6
Peaxi162Scf00344g00172 Petunia axillaris HOM05D008226 ORTHO05D010321 2.7e-26 122.1 117 64.1
QL02p055459 Quercus lobata HOM05D008226 ORTHO05D010321 5.5e-19 97.8 133 48.9
QL93p0228_0028 Quercus lobata HOM05D008226 ORTHO05D010321 5.5e-19 97.8 133 48.9
QL02p056502 Quercus lobata HOM05D008226 ORTHO05D010321 1.6e-18 96.3 135 48.1
Dinv19504 Davidia involucrata HOM05D008226 ORTHO05D010321 2.0e-16 89.4 117 50.4
Ciclev10013928m.g Citrus clementina HOM05D008226 ORTHO05D010321 2.8e-15 85.5 112 47.3
Hma1.2p1_0085F.1_g043950 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 1.1e-14 83.6 127 44.9
Rhsim10G0187600 Rhododendron simsii HOM05D008226 ORTHO05D010321 3.1e-14 82.0 129 42.6
EL10Ac1g01457 Beta vulgaris HOM05D008226 ORTHO05D010321 4.5e-13 78.2 113 44.2
EL10Ac4g08882 Beta vulgaris HOM05D008226 ORTHO05D010321 4.5e-13 78.2 113 44.2
Eucgr.J00616 Eucalyptus grandis HOM05D008226 ORTHO05D010321 1.0e-12 77.0 114 48.2
Migut.K01185 Erythranthe guttata HOM05D008226 ORTHO05D010321 2.9e-12 75.5 118 47.5
Hund06853 Selenicereus undatus HOM05D008226 ORTHO05D010321 5.0e-12 74.7 126 41.3
vmacro20433 Vaccinium macrocarpon HOM05D008226 ORTHO05D010321 2.5e-11 72.4 130 40.0
Carub.0007s3221 Capsella rubella HOM05D008226 ORTHO05D010321 9.4e-11 70.5 126 43.7
ClCG03G014230 Citrullus lanatus HOM05D008226 ORTHO05D010321 1.2e-10 70.1 131 42.7
AT5G36960 Arabidopsis thaliana HOM05D008226 ORTHO05D010321 1.6e-10 69.7 125 44.0
Sp7g05530 Schrenkiella parvula HOM05D008226 ORTHO05D010321 1.6e-10 69.7 127 43.3
Medtr3g063340 Medicago truncatula HOM05D008226 ORTHO05D010321 2.1e-10 69.3 134 37.3
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 2.1e-10 69.3 109 42.2
Psat5g144560 Pisum sativum HOM05D008226 ORTHO05D010321 3.6e-10 68.6 131 36.6
PGR119G1943 Punica granatum HOM05D008226 ORTHO05D010321 6.1e-10 67.8 126 40.5
Cc07_g12530 Coffea canephora HOM05D008226 ORTHO05D010321 1.0e-09 67.0 124 43.5
MELO3C015616.2 Cucumis melo HOM05D008226 ORTHO05D010321 1.0e-09 67.0 123 40.7
Thhalv10027988m.g Eutrema salsugineum HOM05D008226 ORTHO05D010321 1.0e-09 67.0 124 41.1
MBI06_g27514_MAGBIO Magnolia biondii HOM05D008226 ORTHO05D010321 1.4e-09 66.6 123 41.5
CsaV3_1G042000 Cucumis sativus L. HOM05D008226 ORTHO05D010321 4.0e-09 65.1 125 40.8
BcaB06g27049 Brassica carinata HOM05D008226 ORTHO05D010321 8.8e-09 63.9 125 42.4
C04p43890 Brassica napus HOM05D008226 ORTHO05D010321 8.8e-09 63.9 125 42.4
BolC4t25969H Brassica oleracea HOM05D008226 ORTHO05D010321 8.8e-09 63.9 125 42.4
Cpa.g.sc108.24 Carica papaya HOM05D008226 ORTHO05D010321 8.8e-09 63.9 109 40.4
AL7G45590 Arabidopsis lyrata HOM05D008226 ORTHO05D010321 1.2e-08 63.5 128 37.5
BcaC02g09537 Brassica carinata HOM05D008226 ORTHO05D010321 1.2e-08 63.5 125 42.4
A04p10380 Brassica napus HOM05D008226 ORTHO05D010321 1.2e-08 63.5 129 42.6
BraA04t16709Z Brassica rapa HOM05D008226 ORTHO05D010321 1.2e-08 63.5 129 42.6
Glyma.11G203200 Glycine max HOM05D008226 ORTHO05D010321 1.2e-08 63.5 135 36.3
CDE04G1260 Ceratophyllum demersum HOM05D008226 ORTHO05D010321 1.5e-08 63.2 114 42.1
Lalb_Chr18g0053921 Lupinus albus HOM05D008226 ORTHO05D010321 1.5e-08 63.2 137 37.2
THA.LOC104805671 Tarenaya hassleriana HOM05D008226 ORTHO05D010321 1.5e-08 63.2 115 41.7
Lj6g0027436 Lotus japonicus HOM05D008226 ORTHO05D010321 2.0e-08 62.8 139 36.0
Aa31LG9G17730 Aethionema arabicum HOM05D008226 ORTHO05D010321 4.4e-08 61.6 123 40.7
TPR.G37332 Trifolium pratense HOM05D008226 ORTHO05D010321 4.4e-08 61.6 132 34.8
CANSAT78G1508 Cannabis sativa HOM05D008226 ORTHO05D010321 3.7e-07 58.5 119 35.3
TWI34G0961 Tripterygium wilfordii HOM05D008226 ORTHO05D010321 3.7e-07 58.5 106 39.6
Glyma.18G047600 Glycine max HOM05D008226 ORTHO05D010321 1.1e-06 57.0 134 35.1
CARHR216130 Cardamine hirsuta HOM05D008226 ORTHO05D010321 1.4e-06 56.6 129 36.4
Phvul.006G022000 Phaseolus vulgaris HOM05D008226 ORTHO05D010321 1.4e-06 56.6 134 35.8
CSS0006272 Camellia sinensis var. sinensis HOM05D008226 ORTHO05D010321 1.8e-06 56.2 140 33.6
arahy.Tifrunner.gnm1.ann1.LH74FI Arachis hypogaea HOM05D008226 ORTHO05D010321 2.4e-06 55.8 143 35.7
THA.LOC104823832 Tarenaya hassleriana HOM05D008226 ORTHO05D010321 2.4e-06 55.8 118 37.3
Hma1.2p1_0085F.1_g043955 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 4.1e-06 55.1 77 46.8
Hma1.2p1_0085F.1_g043980 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 4.1e-06 55.1 77 46.8
arahy.Tifrunner.gnm1.ann1.H2M7G4 Arachis hypogaea HOM05D008226 ORTHO05D010321 7.0e-06 54.3 143 35.0


User provided reference genes

Program Settings