Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 4.5e-132 474.6 230 100.0
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.8e-88 329.7 230 71.7
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 2.6e-87 325.9 228 73.2
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.8e-86 322.4 228 72.8
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 3.7e-78 295.4 229 66.8
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.4e-77 292.7 228 63.6
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 5.4e-61 238.4 228 53.9
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 1.3e-59 233.8 228 51.3
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 2.9e-59 232.6 228 51.8
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 3.9e-59 232.3 228 51.8
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 1.6e-57 226.9 228 50.4
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.6e-57 226.9 233 51.5
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 3.6e-57 225.7 237 49.4
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 6.8e-56 221.5 230 50.9
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 2.0e-55 219.9 228 49.1
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 7.5e-55 218.0 228 49.1
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.3e-54 217.2 228 50.0
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 2.2e-54 216.5 228 50.4
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 6.4e-54 214.9 228 49.6
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.1e-53 214.2 228 50.4
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 1.9e-53 213.4 228 48.7
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.4e-53 213.0 228 50.0
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 4.1e-53 212.2 228 49.1
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 4.1e-53 212.2 228 47.8
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.2e-52 210.7 229 49.3
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.6e-52 210.3 228 49.1
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 3.5e-52 209.1 230 48.7
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 4.6e-52 208.8 228 48.7
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.8e-52 208.0 228 47.8
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.0e-51 207.6 228 48.2
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 3.0e-51 206.1 228 47.8
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.9e-51 205.7 234 47.0
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 5.0e-51 205.3 233 47.2
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 6.6e-51 204.9 229 47.6
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 2.5e-50 203.0 228 47.4
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.3e-50 202.6 228 46.9
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 5.6e-50 201.8 233 46.8
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 2.8e-49 199.5 228 46.5
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 8.0e-49 198.0 233 46.4
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 1.4e-48 197.2 233 45.9
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 1.2e-47 194.1 232 46.1
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.2e-47 194.1 228 43.9
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.2e-47 194.1 228 45.6
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 4.4e-47 192.2 231 46.8
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 1.1e-45 187.6 228 43.9
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.2e-45 186.0 230 43.5
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 3.2e-45 186.0 230 44.8
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 5.4e-45 185.3 229 41.9
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 7.0e-45 184.9 231 42.4
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.2e-44 184.1 230 43.9
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.2e-44 184.1 230 43.9
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.6e-44 183.7 231 44.2
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 2.7e-44 183.0 229 45.4
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 4.6e-44 182.2 229 43.2
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 4.6e-44 182.2 231 42.0
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 7.8e-44 181.4 228 43.4
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.7e-43 180.3 230 42.6
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 1.1e-42 177.6 228 41.2
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.5e-42 176.4 230 42.6
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 5.6e-42 175.3 228 42.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.1e-41 173.3 101 78.2
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 4.7e-41 172.2 227 42.7
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 6.2e-41 171.8 230 43.5
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 6.2e-41 171.8 227 41.0
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 7.1e-37 158.3 230 39.1
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 1.1e-32 144.4 228 39.0
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.5e-28 129.4 186 40.3
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.0e-27 127.9 229 33.2
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 8.7e-27 124.8 192 35.9
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 8.7e-27 124.8 84 67.9
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.8e-24 117.1 189 38.1
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.2e-23 114.4 231 30.7
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 2.2e-22 110.2 229 28.8
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 5.4e-21 105.5 233 28.8
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.7e-19 100.5 83 56.6
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.1e-18 97.8 80 57.5
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.2e-15 87.8 59 67.8
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 2.6e-15 86.7 48 79.2
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.8e-11 73.9 63 57.1
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 2.1e-09 67.0 42 69.0
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 8.1e-09 65.1 44 59.1


User provided reference genes

Program Settings