Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016694 Solanum tuberosum HOM05D007651 ORTHO05D000898 8.1e-38 159.8 77 100.0
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 6.7e-24 113.6 74 77.0
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 8.7e-24 113.2 74 75.7
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 8.7e-24 113.2 74 75.7
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.5e-20 102.4 71 71.8
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.0e-19 99.8 74 66.2
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 1.0e-16 89.7 72 65.3
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 3.7e-14 81.3 74 56.8
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 2.4e-13 78.6 73 58.9
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.1e-13 78.2 73 57.5
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.2e-12 76.3 73 58.9
ECA232G2927 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.6e-12 75.1 73 56.2
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 2.6e-12 75.1 72 54.2
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 1.0e-11 73.2 73 60.3
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 1.0e-11 73.2 73 57.5
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 5.0e-11 70.9 72 56.9
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 7.2e-10 67.0 74 51.4
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.2e-09 66.2 74 50.0
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.2e-09 66.2 74 50.0
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 1.6e-09 65.9 73 52.1
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 1.6e-09 65.9 61 60.7
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 6.1e-09 63.9 75 49.3
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 7.9e-09 63.5 61 55.7
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 1.0e-08 63.2 73 49.3
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 1.4e-08 62.8 70 48.6
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 2.3e-08 62.0 46 65.2
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 3.0e-08 61.6 59 57.6
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 3.9e-08 61.2 71 47.9
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 3.9e-08 61.2 70 51.4
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 5.1e-08 60.8 61 55.7
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 6.7e-08 60.5 74 50.0
Atru.chr1.1776 Acer truncatum HOM05D007651 ORTHO05D000898 1.5e-07 59.3 73 50.7
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 1.5e-07 59.3 72 50.0
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 9.7e-07 56.6 49 61.2
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 2.8e-06 55.1 70 50.0
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 4.8e-06 54.3 72 44.4
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 6.3e-06 53.9 53 54.7


User provided reference genes

Program Settings