Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016197 Solanum tuberosum HOM05D000138 ORTHO05D000078 3.4e-129 465.3 292 100.0
Solyc11g010710.2 Solanum lycopersicum HOM05D000138 ORTHO05D000078 1.3e-88 330.5 252 90.9
Sopen11g005510 Solanum pennellii HOM05D000138 ORTHO05D000078 1.3e-88 330.5 252 91.3
CAN.G1344.22 Capsicum annuum HOM05D000138 ORTHO05D000078 4.4e-60 235.7 254 61.0
Nitab4.5_0006221g0040 Nicotiana tabacum HOM05D000138 ORTHO05D000078 2.7e-57 226.5 265 55.8
Oeu046551.3 Olea europaea HOM05D000138 ORTHO05D000078 5.8e-36 155.6 292 42.1
Peaxi162Scf00196g00322 Petunia axillaris HOM05D000138 ORTHO05D000078 9.3e-34 148.3 220 47.3
Nitab4.5_0000128g0060 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.6e-33 147.5 202 52.0
Peaxi162Scf01142g00028 Petunia axillaris HOM05D000138 ORTHO05D000078 3.5e-33 146.4 257 44.4
Peaxi162Scf00085g02316 Petunia axillaris HOM05D000138 ORTHO05D000078 7.9e-33 145.2 216 57.4
Oeu012262.1 Olea europaea HOM05D000138 ORTHO05D000078 3.9e-32 142.9 185 49.7
unitig_32.g10713 Utricularia gibba HOM05D000138 ORTHO05D000078 6.9e-29 132.1 302 34.4
Rhsim08G0017000 Rhododendron simsii HOM05D000138 ORTHO05D000078 1.3e-27 127.9 326 37.1
Dinv13592 Davidia involucrata HOM05D000138 ORTHO05D000078 1.7e-27 127.5 229 44.1
Actinidia28819 Actinidia chinensis HOM05D000138 ORTHO05D000078 2.2e-27 127.1 216 43.1
Cc07_g14010 Coffea canephora HOM05D000138 ORTHO05D000078 1.4e-26 124.4 209 45.5
Atru.chr3.1234 Acer truncatum HOM05D000138 ORTHO05D000078 3.2e-26 123.2 272 45.2
CSS0011550 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 2.1e-25 120.6 239 43.1
CSS0017294 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 2.1e-25 120.6 239 43.1
CSS0016598 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 6.0e-25 119.0 199 44.7
CSS0040390 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 6.0e-25 119.0 199 44.7
Nitab4.5_0011938g0030 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.5e-23 114.4 206 45.6
GSVIVG01004382001 Vitis vinifera HOM05D000138 ORTHO05D000078 5.6e-23 112.5 229 42.8
Nitab4.5_0003930g0020 Nicotiana tabacum HOM05D000138 ORTHO05D000078 9.6e-23 111.7 176 45.5
FAN26G3282 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.3e-22 111.3 323 35.3
Oeu017106.1 Olea europaea HOM05D000138 ORTHO05D000078 3.7e-22 109.8 183 42.6
Thecc.01G089400 Theobroma cacao HOM05D000138 ORTHO05D000078 3.7e-22 109.8 191 43.5
vmacro18551 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 6.2e-22 109.0 169 47.9
Haze_03884 Corylus avellana HOM05D000138 ORTHO05D000078 8.2e-22 108.6 218 37.6
FAN23G1042 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.1e-21 108.2 323 34.1
COL.COLO4_27366 Corchorus olitorius HOM05D000138 ORTHO05D000078 1.4e-21 107.8 224 40.6
Duzib147G0861 Durio zibethinus HOM05D000138 ORTHO05D000078 2.4e-21 107.1 219 39.7
Lalb_Chr16g0381611 Lupinus albus HOM05D000138 ORTHO05D000078 3.1e-21 106.7 205 40.0
FAN28G0913 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.0e-21 106.3 217 40.6
DCAR_003445 Daucus carota HOM05D000138 ORTHO05D000078 9.0e-21 105.1 214 40.2
CiPaw.07G046800 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.5e-20 104.4 226 38.1
RcHm_v2.0_Chr2g0111031 Rosa chinensis HOM05D000138 ORTHO05D000078 2.0e-20 104.0 223 37.7
Ciclev10025339m.g Citrus clementina HOM05D000138 ORTHO05D000078 2.6e-20 103.6 195 43.6
Cpa.g.sc55.15 Carica papaya HOM05D000138 ORTHO05D000078 3.4e-20 103.2 225 40.4
TWI53G0559 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 3.4e-20 103.2 206 40.3
CANSAT01G1546 Cannabis sativa HOM05D000138 ORTHO05D000078 5.8e-20 102.4 229 37.6
Duzib187G0129 Durio zibethinus HOM05D000138 ORTHO05D000078 5.8e-20 102.4 224 39.7
Dinv36942 Davidia involucrata HOM05D000138 ORTHO05D000078 7.6e-20 102.1 190 48.4
SGA_v2.0_scaffold45G17228 Striga asiatica HOM05D000138 ORTHO05D000078 7.6e-20 102.1 184 42.4
Actinidia24561 Actinidia chinensis HOM05D000138 ORTHO05D000078 1.0e-19 101.7 163 44.2
SalBow5G1675 Salvia bowleyana HOM05D000138 ORTHO05D000078 1.0e-19 101.7 198 37.9
FvH4_1g19530 Fragaria vesca HOM05D000138 ORTHO05D000078 1.3e-19 101.3 217 39.6
Prupe.6G203000 Prunus persica HOM05D000138 ORTHO05D000078 1.3e-19 101.3 194 38.7
Gohir.D03G035500 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.7e-19 100.9 214 39.3
Potri.007G011600 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.7e-19 100.9 220 38.6
Gohir.A02G145100 Gossypium hirsutum HOM05D000138 ORTHO05D000078 2.9e-19 100.1 214 37.9
Gorai.003G037100 Gossypium raimondii HOM05D000138 ORTHO05D000078 3.8e-19 99.8 214 37.9
Manes.12G125500 Manihot esculenta HOM05D000138 ORTHO05D000078 4.9e-19 99.4 225 37.8
BraA03t09803Z Brassica rapa HOM05D000138 ORTHO05D000078 6.5e-19 99.0 186 42.5
Lalb_Chr09g0325961 Lupinus albus HOM05D000138 ORTHO05D000078 1.1e-18 98.2 206 37.4
Gohir.D10G099700 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.4e-18 97.8 186 38.2
Gorai.011G109500 Gossypium raimondii HOM05D000138 ORTHO05D000078 1.4e-18 97.8 186 38.2
Lj2g0027162 Lotus japonicus HOM05D000138 ORTHO05D000078 1.4e-18 97.8 214 37.9
TWI74G0907 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 1.4e-18 97.8 208 39.4
Glyma.09G199800 Glycine max HOM05D000138 ORTHO05D000078 1.9e-18 97.4 201 36.8
A03p04620 Brassica napus HOM05D000138 ORTHO05D000078 3.2e-18 96.7 192 43.2
FAN19G2755 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.2e-18 96.3 217 38.7
CiPaw.08G140800 Carya illinoinensis HOM05D000138 ORTHO05D000078 5.5e-18 95.9 201 37.8
C03p05290 Brassica napus HOM05D000138 ORTHO05D000078 7.1e-18 95.5 192 43.2
BolC3t13043H Brassica oleracea HOM05D000138 ORTHO05D000078 7.1e-18 95.5 192 43.2
Phvul.002G146400 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 9.3e-18 95.1 203 37.4
Psat2g089880 Pisum sativum HOM05D000138 ORTHO05D000078 1.6e-17 94.4 229 37.1
Gohir.A10G088200 Gossypium hirsutum HOM05D000138 ORTHO05D000078 4.6e-17 92.8 186 37.1
Glyma.01G022500 Glycine max HOM05D000138 ORTHO05D000078 6.0e-17 92.4 197 37.6
GSVIVG01002536001 Vitis vinifera HOM05D000138 ORTHO05D000078 1.0e-16 91.7 154 48.1
Aa31LG3G16640 Aethionema arabicum HOM05D000138 ORTHO05D000078 1.3e-16 91.3 203 40.9
Ah.02g123500 Amaranthus hybridus HOM05D000138 ORTHO05D000078 1.3e-16 91.3 307 31.3
Migut.H02287 Erythranthe guttata HOM05D000138 ORTHO05D000078 1.3e-16 91.3 211 38.9
THA.LOC104819288 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 2.3e-16 90.5 197 40.1
BolC9t59456H Brassica oleracea HOM05D000138 ORTHO05D000078 3.9e-16 89.7 197 40.6
CARHR202780 Cardamine hirsuta HOM05D000138 ORTHO05D000078 3.9e-16 89.7 197 42.1
arahy.Tifrunner.gnm1.ann1.N9BW0I Arachis hypogaea HOM05D000138 ORTHO05D000078 5.1e-16 89.4 225 36.4
arahy.Tifrunner.gnm1.ann1.RWA9J9 Arachis hypogaea HOM05D000138 ORTHO05D000078 5.1e-16 89.4 225 36.4
AT5G10510 Arabidopsis thaliana HOM05D000138 ORTHO05D000078 6.7e-16 89.0 197 41.6
MD15G1310900 Malus domestica HOM05D000138 ORTHO05D000078 6.7e-16 89.0 214 38.8
HanXRQChr14g0443001 Helianthus annuus HOM05D000138 ORTHO05D000078 1.5e-15 87.8 229 37.1
QL06p035893 Quercus lobata HOM05D000138 ORTHO05D000078 1.5e-15 87.8 215 35.3
Manes.13G100600 Manihot esculenta HOM05D000138 ORTHO05D000078 1.9e-15 87.4 223 35.4
AL6G21030 Arabidopsis lyrata HOM05D000138 ORTHO05D000078 2.5e-15 87.0 202 41.1
A02p00510 Brassica napus HOM05D000138 ORTHO05D000078 3.3e-15 86.7 193 38.9
BraA02t05035Z Brassica rapa HOM05D000138 ORTHO05D000078 3.3e-15 86.7 193 38.9
Lsat_1_v5_gn_2_70201 Lactuca sativa HOM05D000138 ORTHO05D000078 3.3e-15 86.7 245 34.3
BcaC03g13314 Brassica carinata HOM05D000138 ORTHO05D000078 4.3e-15 86.3 193 38.9
C02p04500 Brassica napus HOM05D000138 ORTHO05D000078 4.3e-15 86.3 193 38.9
C09p66750 Brassica napus HOM05D000138 ORTHO05D000078 4.3e-15 86.3 200 40.0
BolC2t06410H Brassica oleracea HOM05D000138 ORTHO05D000078 4.3e-15 86.3 193 38.9
MSTRG.2600 Avicennia marina HOM05D000138 ORTHO05D000078 5.7e-15 85.9 258 33.7
A10p27060 Brassica napus HOM05D000138 ORTHO05D000078 5.7e-15 85.9 198 41.9
BraA10t44758Z Brassica rapa HOM05D000138 ORTHO05D000078 5.7e-15 85.9 198 41.9
Lj2A533T46 Lonicera japonica HOM05D000138 ORTHO05D000078 5.7e-15 85.9 132 48.5
Lsat_1_v5_gn_3_63001 Lactuca sativa HOM05D000138 ORTHO05D000078 9.7e-15 85.1 229 35.4
Medtr5g031880 Medicago truncatula HOM05D000138 ORTHO05D000078 9.7e-15 85.1 218 37.6
Carub.0006s0899 Capsella rubella HOM05D000138 ORTHO05D000078 1.6e-14 84.3 206 40.3
Thhalv10013081m.g Eutrema salsugineum HOM05D000138 ORTHO05D000078 1.6e-14 84.3 197 40.6
Sabra07G0009000 Salix brachista HOM05D000138 ORTHO05D000078 1.6e-14 84.3 242 34.3
Sp6g32920 Schrenkiella parvula HOM05D000138 ORTHO05D000078 4.8e-14 82.8 201 40.3
Solyc05g051380.4 Solanum lycopersicum HOM05D000138 ORTHO05D000078 4.8e-14 82.8 205 34.1
MD01G1040700 Malus domestica HOM05D000138 ORTHO05D000078 1.1e-13 81.6 202 40.1
HanXRQChr12g0369011 Helianthus annuus HOM05D000138 ORTHO05D000078 2.4e-13 80.5 201 35.8
SHI21865 Sapria himalayana HOM05D000138 ORTHO05D000078 3.1e-13 80.1 190 36.8
ClCG10G007780 Citrullus lanatus HOM05D000138 ORTHO05D000078 4.1e-13 79.7 192 37.5
BcaB08g37089 Brassica carinata HOM05D000138 ORTHO05D000078 1.2e-12 78.2 186 37.1
Ca_22697_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 2.0e-12 77.4 163 39.3
Nn1g05596 Nelumbo nucifera HOM05D000138 ORTHO05D000078 2.6e-12 77.0 201 35.3
TAR376G0543 Trochodendron aralioides HOM05D000138 ORTHO05D000078 4.5e-12 76.3 184 35.9
VMungo1215G0427 Vigna mungo HOM05D000138 ORTHO05D000078 1.7e-11 74.3 220 35.5
BcaB05g21486 Brassica carinata HOM05D000138 ORTHO05D000078 3.8e-11 73.2 192 34.9
Nn5g29860 Nelumbo nucifera HOM05D000138 ORTHO05D000078 5.0e-11 72.8 199 34.7
TPR.G7731 Trifolium pratense HOM05D000138 ORTHO05D000078 5.0e-11 72.8 213 34.7
TAR628G0379 Trochodendron aralioides HOM05D000138 ORTHO05D000078 8.5e-11 72.0 143 36.4
CAN.G67.15 Capsicum annuum HOM05D000150 ORTHO05D000078 1.1e-10 71.6 93 50.5
BcaB01g05523 Brassica carinata HOM05D000138 ORTHO05D000078 1.4e-10 71.2 174 38.5
CAN.G712.2 Capsicum annuum HOM05D000138 ORTHO05D000078 3.2e-10 70.1 212 37.7
MSTRG.3727 Avicennia marina HOM05D000138 ORTHO05D000078 4.2e-10 69.7 90 48.9
CAN.G2.16 Capsicum annuum HOM05D000610 ORTHO05D001284 2.1e-09 67.4 95 51.6
SalBow3G4484 Salvia bowleyana HOM05D000138 ORTHO05D000078 2.1e-09 67.4 129 42.6
Sopen05g029780 Solanum pennellii HOM05D000138 ORTHO05D000078 2.1e-09 67.4 145 35.2
Eucgr.I00564 Eucalyptus grandis HOM05D000138 ORTHO05D000078 2.3e-08 63.9 189 31.7
Sc16g0000560 Simmondsia chinensis HOM05D000138 ORTHO05D000078 2.3e-08 63.9 156 34.6
MELO3C016413.2 Cucumis melo HOM05D000138 ORTHO05D000078 3.0e-08 63.5 202 33.7
CsaV3_3G006900 Cucumis sativus L. HOM05D000138 ORTHO05D000078 6.7e-08 62.4 205 33.2
SalBow5G0812 Salvia bowleyana HOM05D000138 ORTHO05D000078 8.7e-08 62.0 94 44.7
PSO170G3213 Papaver somniferum HOM05D000138 ORTHO05D000078 1.9e-07 60.8 308 33.4
SGA_v2.0_scaffold195G40862 Striga asiatica HOM05D000138 ORTHO05D000078 1.9e-07 60.8 99 47.5
AT5G65510 Arabidopsis thaliana HOM05D000138 ORTHO05D000078 7.4e-07 58.9 216 31.0
Thhalv10005529m.g Eutrema salsugineum HOM05D000138 ORTHO05D000078 9.7e-07 58.5 183 32.2
Hund16523 Selenicereus undatus HOM05D000138 ORTHO05D000078 2.2e-06 57.4 200 30.5
Lju188C4T2 Lonicera japonica HOM05D000138 ORTHO05D000078 3.7e-06 56.6 94 44.7
Phvul.003G288500 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 8.2e-06 55.5 127 37.8


User provided reference genes

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