Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 6.3e-94 347.4 177 100.0
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.8e-85 319.3 177 92.7
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 3.5e-84 315.1 177 92.1
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 9.2e-77 290.4 175 83.4
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.6e-74 281.2 169 84.0
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 9.2e-69 263.8 180 80.0
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 7.8e-68 260.8 181 76.2
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 4.4e-55 218.4 163 68.7
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.7e-54 216.5 172 62.2
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 2.2e-54 216.1 120 80.8
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 4.9e-54 214.9 186 64.5
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 4.9e-54 214.9 172 62.2
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.3e-54 214.2 172 62.2
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.4e-53 213.4 120 79.2
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 4.1e-53 211.8 171 64.3
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 5.4e-53 211.5 176 63.6
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 7.1e-53 211.1 170 63.5
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 1.2e-52 210.3 112 81.2
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.6e-52 209.9 118 77.1
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.1e-52 209.5 172 63.4
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.7e-52 209.1 161 64.6
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 7.8e-52 207.6 115 76.5
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-51 207.2 203 59.1
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-51 207.2 203 59.1
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.0e-51 207.2 116 77.6
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.7e-51 206.5 124 76.6
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.7e-51 206.5 111 82.0
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 2.3e-51 206.1 172 64.0
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.9e-51 205.3 206 57.8
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.9e-51 205.3 114 79.8
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 3.9e-51 205.3 163 65.0
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 3.9e-51 205.3 184 58.7
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 5.1e-51 204.9 168 64.3
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 8.6e-51 204.1 114 80.7
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.1e-50 203.8 136 68.4
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 1.5e-50 203.4 178 62.9
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 2.5e-50 202.6 179 62.0
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 4.3e-50 201.8 120 75.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 4.3e-50 201.8 109 80.7
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 5.6e-50 201.4 168 62.5
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 9.6e-50 200.7 170 60.6
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 9.6e-50 200.7 169 62.1
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 1.2e-49 200.3 180 58.9
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.1e-49 199.5 122 73.0
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 2.1e-49 199.5 176 58.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.1e-49 199.5 140 70.0
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.6e-49 198.7 113 77.0
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 3.6e-49 198.7 109 78.9
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 4.7e-49 198.4 181 58.6
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 4.7e-49 198.4 169 60.4
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 4.7e-49 198.4 167 64.1
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 6.2e-49 198.0 113 76.1
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 6.2e-49 198.0 177 55.9
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 8.1e-49 197.6 173 58.4
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 8.1e-49 197.6 180 58.9
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 8.1e-49 197.6 175 56.0
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.4e-48 196.8 181 58.0
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.4e-48 196.8 166 61.4
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-48 196.4 140 69.3
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.8e-48 196.4 151 62.3
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 2.4e-48 196.1 170 62.4
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 4.0e-48 195.3 121 73.6
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 4.0e-48 195.3 159 63.5
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 6.8e-48 194.5 177 57.1
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.2e-47 193.7 167 56.3
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.2e-47 193.7 152 64.5
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.2e-47 193.7 114 74.6
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.2e-47 193.7 172 62.2
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 1.5e-47 193.4 179 57.5
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 1.5e-47 193.4 179 57.5
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.5e-47 193.4 174 59.8
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.5e-47 193.4 117 75.2
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 2.0e-47 193.0 179 57.5
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 2.0e-47 193.0 178 55.6
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 3.4e-47 192.2 174 58.6
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 4.4e-47 191.8 177 57.6
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 4.4e-47 191.8 177 57.6
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 4.4e-47 191.8 161 61.5
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 4.4e-47 191.8 177 55.9
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 4.4e-47 191.8 174 61.5
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 5.8e-47 191.4 112 75.0
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.9e-47 190.7 137 68.6
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.3e-46 190.3 166 60.2
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 2.9e-46 189.1 118 73.7
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 3.8e-46 188.7 133 69.9
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 4.9e-46 188.3 180 55.0
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 6.4e-46 188.0 135 66.7
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 8.4e-46 187.6 181 56.4
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.4e-45 186.8 133 68.4
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.4e-45 186.0 182 56.6
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 4.2e-45 185.3 196 56.1
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.3e-42 175.6 110 70.0
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 2.8e-41 172.6 173 52.0
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.5e-39 166.8 196 51.5
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 4.4e-39 165.2 100 72.0
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 5.8e-39 164.9 162 54.9
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.8e-38 162.2 169 52.1
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.4e-37 160.2 96 70.8
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.5e-34 150.2 117 59.0
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 9.6e-34 147.5 158 47.5
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.8e-33 146.0 107 59.8
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 6.2e-33 144.8 146 49.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.4e-32 142.9 189 45.5
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.1e-32 142.5 173 45.7
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.0e-32 142.1 130 53.8
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.3e-32 141.7 177 48.6
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 5.3e-32 141.7 107 58.9
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.0e-31 139.8 107 56.1
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.6e-31 139.4 116 56.9
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 3.4e-31 139.0 154 48.7
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.4e-31 139.0 107 57.9
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 3.4e-31 139.0 108 53.7
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 4.5e-31 138.7 112 53.6
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 5.8e-31 138.3 137 51.1
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 7.6e-31 137.9 103 56.3
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 9.9e-31 137.5 107 57.0
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.3e-30 137.1 156 46.2
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 2.2e-30 136.3 120 50.8
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 2.2e-30 136.3 107 55.1
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 2.9e-30 136.0 107 51.4
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 2.9e-30 136.0 112 53.6
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 3.8e-30 135.6 125 51.2
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.9e-30 135.2 108 51.9
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 6.4e-30 134.8 103 58.3
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.4e-30 134.4 103 55.3
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.9e-29 133.3 181 44.2
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 2.4e-29 132.9 100 61.0
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 3.2e-29 132.5 130 48.5
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 3.2e-29 132.5 177 42.9
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 5.4e-29 131.7 127 44.1
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 5.4e-29 131.7 107 52.3
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 7.1e-29 131.3 112 52.7
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 9.3e-29 131.0 107 53.3
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.3e-29 131.0 107 53.3
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.2e-28 130.6 103 53.4
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 2.1e-28 129.8 110 53.6
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.7e-28 129.4 112 52.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 3.5e-28 129.0 112 51.8
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.5e-28 129.0 112 51.8
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 3.5e-28 129.0 105 53.3
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 6.0e-28 128.3 112 50.0
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 7.9e-28 127.9 112 50.0
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.3e-27 126.3 112 50.9
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 5.1e-27 125.2 125 44.8
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 8.7e-27 124.4 95 57.9
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 5.6e-26 121.7 104 51.0
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 9.6e-26 120.9 139 41.0
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 2.1e-25 119.8 150 43.3
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.8e-25 119.4 107 47.7
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 4.8e-25 118.6 171 40.4
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 6.2e-25 118.2 141 44.7
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.1e-24 117.5 88 59.1
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.4e-24 117.1 65 76.9
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.8e-24 116.7 103 53.4
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.4e-24 116.3 185 37.8
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 6.9e-24 114.8 97 51.5
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.4e-23 112.5 58 81.0
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.1e-21 107.5 118 45.8
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.1e-21 107.5 118 45.8
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 4.2e-21 105.5 55 78.2
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-20 104.0 64 68.8
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 1.6e-20 103.6 191 31.9
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 4.6e-20 102.1 93 49.5
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.9e-19 99.0 98 52.0
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.5e-18 97.1 141 38.3
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 7.4e-18 94.7 214 28.5
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 1.6e-17 93.6 167 39.5
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 1.1e-16 90.9 61 62.3
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 6.1e-12 75.1 82 46.3
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.3e-11 73.2 97 37.1
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 6.7e-11 71.6 113 45.1
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.8e-08 63.5 58 51.7
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 4.1e-08 62.4 47 59.6
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 9.0e-08 61.2 149 27.5
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 2.0e-07 60.1 50 54.0
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 3.4e-07 59.3 39 66.7
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 3.4e-07 59.3 51 49.0


User provided reference genes

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