Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 3.0e-176 621.7 305 100.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 4.3e-175 617.8 305 99.3
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.8e-174 615.1 305 99.0
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 3.5e-169 598.2 306 95.4
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.8e-168 595.9 305 94.8
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 7.4e-167 590.5 305 93.8
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 2.2e-155 552.4 305 86.2
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 3.8e-155 551.6 303 86.8
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.6e-153 546.2 303 86.1
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 4.6e-153 544.7 305 86.2
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.3e-152 542.3 305 85.9
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 8.8e-152 540.4 303 84.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 2.6e-151 538.9 303 83.8
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 4.3e-151 538.1 303 83.8
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 7.4e-151 537.3 303 83.5
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 9.7e-151 537.0 305 84.6
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 9.7e-151 537.0 305 83.9
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.3e-150 536.6 305 83.9
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 2.8e-150 535.4 302 84.1
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 6.3e-150 534.3 300 86.3
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.1e-149 533.5 305 85.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.4e-149 532.3 305 83.0
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 3.1e-149 531.9 306 85.6
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 4.1e-149 531.6 305 83.6
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 5.3e-149 531.2 305 84.9
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 5.3e-149 531.2 302 82.8
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.0e-147 526.9 305 83.3
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.7e-147 526.2 308 81.8
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.7e-147 526.2 295 84.4
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 3.8e-147 525.0 303 83.5
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 8.5e-147 523.9 298 83.6
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.4e-146 523.1 305 81.3
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 4.2e-146 521.5 295 83.4
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 7.2e-146 520.8 303 81.8
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 7.2e-146 520.8 298 83.2
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 1.6e-145 519.6 305 81.3
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.6e-145 519.6 303 83.2
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 2.7e-145 518.8 301 81.4
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.6e-145 518.5 306 81.4
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.6e-145 518.5 306 81.4
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 4.7e-145 518.1 303 81.5
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 4.7e-145 518.1 317 80.1
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 1.0e-144 516.9 298 82.6
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.0e-144 516.9 301 81.7
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.0e-144 516.9 324 77.5
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.3e-144 515.8 306 80.7
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 5.2e-144 514.6 306 80.4
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 6.7e-144 514.2 300 81.0
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.1e-143 513.5 320 78.8
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.1e-143 513.5 306 80.4
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.6e-143 512.3 290 84.8
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 2.2e-142 509.2 322 78.0
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 1.2e-140 503.4 301 80.4
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.6e-140 503.1 353 70.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 5.9e-140 501.1 299 78.9
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.0e-139 500.4 306 77.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 6.5e-139 497.7 304 78.3
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 2.7e-137 492.3 298 78.2
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 3.6e-137 491.9 277 84.5
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.0e-136 488.4 300 80.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.5e-135 486.5 298 77.2
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.3e-135 485.3 294 78.6
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 4.4e-135 485.0 293 77.1
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 5.7e-135 484.6 298 76.5
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 5.7e-135 484.6 294 78.6
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 5.7e-135 484.6 338 72.5
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.3e-134 483.4 294 77.2
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.3e-134 483.4 302 79.5
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.7e-134 483.0 294 78.2
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.8e-134 482.3 298 76.2
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 3.7e-134 481.9 296 76.4
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.4e-133 479.9 294 77.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.4e-133 479.9 294 77.9
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 2.4e-133 479.2 303 73.9
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.1e-133 478.4 294 76.9
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.2e-132 476.9 296 75.3
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.2e-132 476.9 298 75.8
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 2.0e-132 476.1 296 75.7
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 3.5e-132 475.3 299 76.6
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 7.7e-132 474.2 303 72.6
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 2.2e-131 472.6 297 75.8
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 3.8e-131 471.9 297 75.8
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.1e-130 470.3 264 84.1
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 9.4e-130 467.2 298 72.5
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.1e-129 466.1 319 71.8
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 4.0e-128 461.8 298 73.2
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 4.5e-124 448.4 301 74.4
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 4.5e-124 448.4 303 70.0
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 5.9e-124 448.0 292 71.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.7e-123 446.4 299 73.9
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 1.1e-122 443.7 294 71.8
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 3.6e-121 438.7 266 77.1
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 3.8e-115 418.7 299 67.9
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.2e-105 387.1 289 61.6
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 2.1e-105 386.3 221 81.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 3.2e-101 372.5 285 61.8
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 7.8e-100 367.9 294 62.2
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 2.3e-99 366.3 199 86.9
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 3.7e-94 349.0 285 60.4
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.3e-91 340.5 200 77.0
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 3.8e-86 322.4 199 76.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.6e-81 307.0 167 89.8
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 8.4e-78 294.7 187 75.4
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.6e-71 273.1 257 52.5
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 2.3e-67 260.0 147 81.6
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 7.9e-60 235.0 149 72.5
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 7.4e-58 228.4 151 74.2
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 4.2e-53 212.6 117 89.7
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.2e-53 212.6 142 74.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 8.7e-51 204.9 108 92.6
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 1.9e-37 160.6 91 89.0
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.6e-31 140.2 77 87.0
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 5.9e-31 139.0 118 63.6
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.6e-28 131.0 336 27.4
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 6.1e-28 129.0 72 87.5
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 1.4e-24 117.9 73 74.0
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 7.0e-24 115.5 308 25.0
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 9.1e-24 115.2 329 27.4
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.2e-10 71.6 41 80.5


User provided reference genes

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