Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.9e-55 218.8 97 100.0
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.4e-40 167.2 92 71.7
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.0e-37 159.8 92 67.4
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-37 158.3 87 72.4
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 7.6e-33 143.7 91 62.6
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 1.7e-32 142.5 92 62.0
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.2e-31 138.3 86 61.6
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.9e-28 129.0 94 56.4
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 1.3e-27 126.3 81 63.0
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-27 125.9 88 54.5
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 1.2e-25 119.8 94 50.0
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.6e-25 117.1 95 46.3
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-24 116.3 95 47.4
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.4e-24 113.6 83 53.0
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.9e-23 112.5 69 59.4
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.2e-23 111.3 79 53.2
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-22 109.8 91 50.5
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.9e-22 107.1 91 47.3
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.8e-21 105.9 95 46.3
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-21 105.1 93 41.9
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 1.5e-20 102.8 64 64.1
Sopen10g005760 Solanum pennellii HOM05D008877 ORTHO05D006370 1.5e-20 102.8 64 65.6
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 1.9e-20 102.4 95 43.2
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-20 102.1 63 63.5
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.4e-20 100.5 54 74.1
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.4e-20 100.5 94 41.5
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-19 99.8 79 49.4
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.0e-18 93.6 60 58.3
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.4e-17 91.7 60 58.3
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 5.8e-17 90.9 86 41.9
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.9e-16 88.6 53 67.9
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 2.5e-15 85.5 86 39.5
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 9.3e-15 83.6 84 40.5
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.6e-14 82.8 93 40.9
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.5e-14 81.6 72 48.6
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.9e-14 80.5 57 52.6
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 1.3e-13 79.7 91 37.4
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 1.8e-13 79.3 92 38.0
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 1.8e-13 79.3 95 37.9
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 2.3e-13 79.0 81 38.3
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 3.0e-13 78.6 86 38.4
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 3.0e-13 78.6 81 35.8
PGSC0003DMG400045208 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.1e-13 77.8 92 37.0
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 5.1e-13 77.8 80 40.0
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 1.1e-12 76.6 75 40.0
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 1.5e-12 76.3 92 37.0
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-12 76.3 92 37.0
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 2.5e-12 75.5 92 32.6
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.5e-12 75.5 92 32.6
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.5e-12 75.5 92 32.6
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.5e-12 75.5 92 32.6
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 3.3e-12 75.1 74 41.9
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 4.3e-12 74.7 76 40.8
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 9.7e-12 73.6 72 43.1
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 9.7e-12 73.6 84 36.9
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 9.7e-12 73.6 70 41.4
PGSC0003DMG400027282 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-11 73.2 39 74.4
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 1.3e-11 73.2 88 35.2
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.6e-11 72.8 73 38.4
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.6e-11 72.8 80 36.2
PGSC0003DMG400016074 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.8e-11 71.2 54 51.9
PGSC0003DMG400009170 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.3e-11 70.9 52 55.8
PGSC0003DMG400020925 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.3e-11 70.9 40 67.5
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-10 70.1 73 38.4
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-10 70.1 62 43.5
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 1.4e-10 69.7 54 50.0
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 2.4e-10 68.9 85 35.3
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 5.3e-10 67.8 48 50.0
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 1.5e-09 66.2 84 32.1
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 2.6e-09 65.5 49 49.0
Solyc05g017910.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 5.9e-09 64.3 47 46.8
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 63.5 72 38.9
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 1.7e-08 62.8 90 31.1
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 1.7e-08 62.8 90 31.1
Sopen02g009420 Solanum pennellii HOM05D002138 ORTHO05D000004 1.7e-08 62.8 36 63.9
Dinv38294 Davidia involucrata HOM05D010100 ORTHO05D006370 2.9e-08 62.0 55 43.6
CAN.G795.3 Capsicum annuum HOM05D008877 ORTHO05D006370 3.8e-08 61.6 42 61.9
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 5.0e-08 61.2 55 41.8
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 6.5e-08 60.8 84 38.1
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 8.5e-08 60.5 53 45.3
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.4e-07 59.7 75 38.7
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 1.4e-07 59.7 65 36.9
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-07 59.7 49 51.0
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-07 59.3 77 37.7
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-07 58.9 77 37.7
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 2.5e-07 58.9 85 29.4
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 58.5 49 49.0
Peaxi162Scf00097g00027 Petunia axillaris HOM05D000251 ORTHO05D012723 3.2e-07 58.5 47 46.8
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 3.2e-07 58.5 73 39.7
PGSC0003DMG400043524 Solanum tuberosum HOM05D008032 ORTHO05D000006 3.2e-07 58.5 49 46.9
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-07 58.2 49 49.0
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-07 58.2 72 36.1
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-07 58.2 72 34.7
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 5.5e-07 57.8 49 49.0
Dinv04900 Davidia involucrata HOM05D000003 ORTHO05D000007 7.2e-07 57.4 89 36.0
PGSC0003DMG400029006 Solanum tuberosum HOM05D000001 ORTHO05D011642 7.2e-07 57.4 45 46.7
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 9.3e-07 57.0 75 37.3
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 9.3e-07 57.0 82 37.8
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 9.3e-07 57.0 73 41.1
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 9.3e-07 57.0 73 35.6
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 9.3e-07 57.0 73 35.6
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 56.6 73 32.9
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 56.6 73 32.9
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 56.6 72 33.3
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 56.6 76 38.2
PGSC0003DMG400039210 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-06 56.6 76 32.9
PGSC0003DMG400040082 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-06 56.6 39 56.4
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 1.6e-06 56.2 66 33.3
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 56.2 72 33.3
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 56.2 72 34.7
Nitab4.5_0009871g0020 Nicotiana tabacum HOM05D008032 ORTHO05D006370 1.6e-06 56.2 37 51.4
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.1e-06 55.8 94 36.2
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 2.1e-06 55.8 100 28.0
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 2.1e-06 55.8 76 35.5
Dinv05828 Davidia involucrata HOM05D000003 ORTHO05D000007 2.7e-06 55.5 89 34.8
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-06 55.5 72 33.3
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 2.7e-06 55.5 77 35.1
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 3.6e-06 55.1 49 46.9
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-06 55.1 48 47.9
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-06 55.1 63 44.4
SEGI_36704 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.6e-06 55.1 77 32.5
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-06 54.7 75 34.7
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 6.1e-06 54.3 76 34.2
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 6.1e-06 54.3 62 46.8
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-06 54.3 73 39.7
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 7.9e-06 53.9 75 36.0
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.9e-06 53.9 71 32.4
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-06 53.9 71 38.0
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-06 53.9 49 46.9


User provided reference genes

Program Settings