Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 1.6e-89 332.8 179 100.0
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 2.2e-46 189.5 135 77.0
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 1.4e-40 170.2 135 76.3
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 1.4e-37 160.2 135 68.9
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 2.2e-30 136.3 135 59.3
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 6.1e-28 128.3 135 58.5
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.5e-26 123.6 133 52.6
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 6.3e-25 118.2 113 54.9
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 1.6e-23 113.6 97 69.1
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 2.6e-23 112.8 134 52.2
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.0e-22 110.9 135 48.9
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 1.3e-22 110.5 112 53.6
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 5.0e-22 108.6 132 48.5
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.1e-21 107.5 133 46.6
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 1.1e-21 107.5 112 52.7
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 1.5e-21 107.1 133 44.4
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 5.5e-21 105.1 143 43.4
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 9.4e-21 104.4 135 45.9
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 3.6e-20 102.4 133 43.6
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 1.4e-19 100.5 135 45.2
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 1.4e-19 100.5 112 51.8
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 2.3e-19 99.8 143 42.0
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 5.2e-19 98.6 133 42.9
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 5.2e-19 98.6 139 42.4
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 5.2e-19 98.6 120 47.5
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 5.2e-19 98.6 112 52.7
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 6.8e-19 98.2 115 47.8
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 1.2e-18 97.4 112 49.1
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 1.2e-18 97.4 161 40.4
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 2.6e-18 96.3 119 46.2
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 3.4e-18 95.9 159 37.1
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 3.4e-18 95.9 139 43.2
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 4.4e-18 95.5 132 41.7
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 4.4e-18 95.5 141 45.4
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 4.4e-18 95.5 119 48.7
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 9.8e-18 94.4 108 48.1
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 9.8e-18 94.4 143 49.7
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.3e-17 94.0 162 38.3
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 1.3e-17 94.0 141 42.6
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.7e-17 93.6 140 42.9
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 2.2e-17 93.2 132 40.9
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 2.8e-17 92.8 108 48.1
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 1.1e-16 90.9 107 44.9
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 1.4e-16 90.5 141 37.6
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 1.8e-16 90.1 147 43.5
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 3.1e-16 89.4 150 40.7
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 4.1e-16 89.0 113 48.7
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 7.0e-16 88.2 147 38.1
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 7.0e-16 88.2 151 41.7
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 1.6e-15 87.0 142 47.9
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 1.6e-15 87.0 164 37.2
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 2.0e-15 86.7 133 39.8
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 5.9e-15 85.1 141 39.7
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 7.7e-15 84.7 161 37.3
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.0e-14 84.3 140 38.6
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 1.3e-14 84.0 145 40.7
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 2.2e-14 83.2 152 38.8
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 2.9e-14 82.8 175 34.3
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 5.0e-14 82.0 112 43.8
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.5e-13 80.5 127 40.2
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 1.9e-13 80.1 143 37.1
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 2.5e-13 79.7 101 46.5
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 5.5e-13 78.6 108 42.6
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 5.5e-13 78.6 146 38.4
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 5.5e-13 78.6 131 39.7
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 7.2e-13 78.2 164 34.1
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 2.7e-12 76.3 112 41.1
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 4.7e-12 75.5 131 39.7
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 1.8e-11 73.6 112 39.3
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.0e-11 72.8 165 35.8
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 5.2e-11 72.0 70 54.3
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 6.8e-11 71.6 156 36.5
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 6.8e-11 71.6 154 34.4
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 6.8e-11 71.6 146 35.6
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 6.8e-11 71.6 150 35.3
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.0e-10 70.1 122 35.2
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 2.0e-10 70.1 98 42.9
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 2.6e-10 69.7 164 36.0
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 2.6e-10 69.7 69 52.2
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 5.7e-10 68.6 160 35.6
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 7.5e-10 68.2 139 38.1
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 1.3e-09 67.4 78 52.6
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 1.7e-09 67.0 150 34.7
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 1.7e-09 67.0 99 36.4
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 2.2e-09 66.6 111 40.5
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 2.8e-09 66.2 163 36.2
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 3.7e-09 65.9 141 33.3
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 3.7e-09 65.9 131 35.1
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 3.7e-09 65.9 135 36.3
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 6.3e-09 65.1 163 34.4
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 8.3e-09 64.7 102 33.3
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.8e-08 63.5 115 40.0
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.8e-08 63.5 82 45.1
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 4.1e-08 62.4 94 38.3
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 4.1e-08 62.4 94 38.3
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 9.1e-08 61.2 112 41.1
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 9.1e-08 61.2 48 62.5
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.6e-07 60.5 82 43.9
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.6e-07 60.5 82 43.9
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.6e-07 60.5 82 43.9
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 3.5e-07 59.3 168 30.4
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 4.5e-07 58.9 160 33.8
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 4.5e-07 58.9 188 30.9
unitig_749.g13722 Utricularia gibba HOM05D006778 ORTHO05D008341 7.7e-07 58.2 96 37.5
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.0e-06 57.8 117 35.0
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 3.8e-06 55.8 210 28.6


User provided reference genes

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