Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.2e-122 442.2 208 100.0
PGSC0003DMG400020925 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.0e-51 206.5 137 75.2
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.6e-42 174.5 220 43.2
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.5e-41 172.9 220 43.2
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-37 160.6 111 62.2
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 4.6e-35 152.1 118 54.2
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 3.6e-32 142.5 114 54.4
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-30 137.5 86 61.6
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.7e-26 123.6 139 42.4
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.3e-26 123.2 86 57.0
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.1e-25 120.9 104 48.1
Sopen10g005760 Solanum pennellii HOM05D008877 ORTHO05D006370 5.6e-25 118.6 91 56.0
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-24 116.7 128 41.4
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.1e-24 114.8 83 56.6
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.8e-23 113.6 121 40.5
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 3.1e-23 112.8 103 47.6
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 4.4e-22 109.0 91 53.8
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.4e-22 109.0 75 65.3
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.6e-22 108.2 64 67.2
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.3e-21 107.5 207 31.9
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 1.3e-21 107.5 76 57.9
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-21 106.3 92 46.7
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.8e-21 105.9 127 35.4
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 4.9e-21 105.5 105 41.9
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.4e-21 104.8 106 40.6
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-20 103.2 94 50.0
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.2e-20 102.8 159 34.6
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.2e-20 102.4 84 50.0
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.4e-20 102.1 106 43.4
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 1.0e-18 97.8 121 37.2
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.3e-18 96.7 76 52.6
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 3.0e-18 96.3 108 38.9
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 5.1e-18 95.5 134 32.8
PGSC0003DMG400027282 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.1e-18 95.5 86 48.8
Solyc05g017910.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 4.3e-17 92.4 88 45.5
CAN.G795.3 Capsicum annuum HOM05D008877 ORTHO05D006370 9.6e-17 91.3 84 53.6
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-16 90.5 85 45.9
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 1.6e-16 90.5 111 37.8
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.8e-16 89.0 86 41.9
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 1.4e-15 87.4 107 35.5
PGSC0003DMG400016074 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.8e-15 87.0 75 46.7
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 2.4e-15 86.7 146 32.2
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-15 86.7 146 32.2
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-15 86.7 146 32.2
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-15 86.7 146 32.2
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 3.1e-15 86.3 101 36.6
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.2e-14 84.3 111 35.1
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 2.6e-14 83.2 84 39.3
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 4.5e-14 82.4 96 37.5
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 5.8e-14 82.0 58 56.9
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 7.6e-14 81.6 103 35.9
PGSC0003DMG400045208 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.9e-14 81.3 108 36.1
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 9.9e-14 81.3 106 32.1
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 1.7e-13 80.5 102 37.3
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-13 80.5 102 37.3
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.7e-13 80.5 118 33.1
PGSC0003DMG400009170 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.2e-13 80.1 74 45.9
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 4.9e-13 79.0 74 39.2
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 8.4e-13 78.2 102 36.3
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 1.4e-12 77.4 108 29.6
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 1.9e-12 77.0 74 44.6
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 4.2e-12 75.9 75 36.0
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 7.1e-12 75.1 80 38.8
Dinv38294 Davidia involucrata HOM05D010100 ORTHO05D006370 2.7e-11 73.2 60 48.3
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 3.5e-11 72.8 81 42.0
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 3.5e-11 72.8 101 29.7
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 4.6e-11 72.4 116 31.0
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 7.9e-11 71.6 85 36.5
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 7.9e-11 71.6 105 33.3
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 1.0e-10 71.2 74 36.5
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 1.8e-10 70.5 86 37.2
PGSC0003DMG400026459 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-10 69.7 65 47.7
PGSC0003DMG400029006 Solanum tuberosum HOM05D000001 ORTHO05D011642 3.0e-10 69.7 64 45.3
Sopen02g009420 Solanum pennellii HOM05D002138 ORTHO05D000004 3.9e-10 69.3 44 70.5
PGSC0003DMG400043524 Solanum tuberosum HOM05D008032 ORTHO05D000006 3.9e-10 69.3 66 45.5
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 1.9e-09 67.0 74 39.2
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.9e-09 67.0 58 46.6
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-09 66.2 84 40.5
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 4.3e-09 65.9 94 36.2
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 4.3e-09 65.9 94 36.2
Sopen07g007680 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-09 65.9 61 50.8
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 7.4e-09 65.1 112 36.6
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 9.6e-09 64.7 110 25.5
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-08 64.3 111 35.1
PGSC0003DMG400040082 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-08 63.9 61 45.9
Dinv11541 Davidia involucrata HOM05D013474 ORTHO05D006370 2.1e-08 63.5 66 37.9
Dinv09222 Davidia involucrata HOM05D025719 ORTHO05D006370 2.8e-08 63.2 101 32.7
Dinv07139 Davidia involucrata HOM05D010100 ORTHO05D006370 4.8e-08 62.4 108 33.3
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 4.8e-08 62.4 84 39.3
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-08 62.4 84 39.3
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-08 62.4 84 39.3
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-08 62.4 93 33.3
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 8.1e-08 61.6 83 36.1
Dinv02443 Davidia involucrata HOM05D010100 ORTHO05D006370 1.1e-07 61.2 61 41.0
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 61.2 84 39.3
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 61.2 96 38.5
Peaxi162Scf00097g00028 Petunia axillaris HOM05D000251 ORTHO05D000414 1.1e-07 61.2 46 60.9
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-07 60.8 157 31.2
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-07 60.8 140 29.3
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 2.4e-07 60.1 176 24.4
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 60.1 167 30.5
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 60.1 105 30.5
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 60.1 84 36.9
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-07 59.7 93 32.3
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 3.1e-07 59.7 109 26.6
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.0e-07 59.3 80 37.5
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.0e-07 59.3 57 43.9
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 5.3e-07 58.9 51 45.1
Nitab4.5_0009574g0010 Nicotiana tabacum HOM05D006091 ORTHO05D006421 5.3e-07 58.9 61 45.9
SEGI_27775 Sequoiadendron giganteum HOM05D002752 ORTHO05D014263 5.3e-07 58.9 111 29.7
CAN.G39.12 Capsicum annuum HOM05D005318 ORTHO05D006791 6.9e-07 58.5 50 50.0
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-07 58.5 105 30.5
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-07 58.5 105 29.5
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 1.2e-06 57.8 66 36.4
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 57.8 105 31.4
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 57.8 98 30.6
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.2e-06 57.8 73 30.1
Peaxi162Scf00480g00047 Petunia axillaris HOM05D008032 ORTHO05D006370 1.5e-06 57.4 108 26.9
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-06 57.0 49 46.9
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-06 57.0 166 27.7
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-06 57.0 102 31.4
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-06 56.6 68 45.6
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.4e-06 56.2 99 34.3
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-06 56.2 117 29.1
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-06 56.2 49 46.9
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-06 56.2 71 39.4
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 3.4e-06 56.2 87 33.3
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 3.4e-06 56.2 71 38.0
Lj3P194T52 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-06 55.8 49 49.0
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-06 55.8 82 37.8
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 4.5e-06 55.8 89 38.2
Sopen06g005880 Solanum pennellii HOM05D008877 ORTHO05D006370 4.5e-06 55.8 45 46.7
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 5.8e-06 55.5 79 34.2
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-06 55.1 85 30.6
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-06 55.1 68 42.6
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-06 55.1 49 51.0
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-06 55.1 49 46.9
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 7.6e-06 55.1 49 51.0
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-06 55.1 68 42.6
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-06 55.1 49 49.0
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 7.6e-06 55.1 68 42.6
Nn3g19038 Nelumbo nucifera HOM05D008877 ORTHO05D006370 7.6e-06 55.1 74 33.8
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-06 54.7 49 44.9
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-06 54.7 98 29.6


User provided reference genes

Program Settings