Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 0.0e+00 1541.9 833 100.0
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 0.0e+00 1375.1 834 91.1
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 2.9e-290 1001.9 883 65.7
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 3.7e-285 984.9 879 65.8
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 1.3e-269 933.3 882 64.3
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 1.7e-221 773.5 907 53.9
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 2.3e-194 683.3 443 90.5
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 9.6e-76 289.3 894 32.6
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 8.2e-59 233.0 998 29.3
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 9.7e-52 209.5 924 29.4
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 1.2e-49 202.6 641 33.9
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 2.5e-47 194.9 908 28.9
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 3.6e-46 191.0 885 30.8
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 6.1e-46 190.3 738 30.8
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.5e-44 185.7 469 37.7
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 8.2e-43 179.9 578 30.1
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 2.6e-41 174.9 839 29.3
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 7.7e-41 173.3 886 27.7
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 2.5e-39 168.3 868 28.2
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 2.6e-36 158.3 815 28.6
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 1.7e-35 155.6 702 30.2
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 2.2e-35 155.2 937 26.7
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.8e-34 152.1 565 32.7
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 1.8e-34 152.1 650 31.1
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 7.0e-34 150.2 908 28.1
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 1.2e-33 149.4 626 28.6
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 1.2e-33 149.4 716 29.7
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 3.5e-33 147.9 462 34.8
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 1.1e-31 142.9 922 26.7
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 5.5e-31 140.6 425 33.6
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 5.5e-31 140.6 232 42.2
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 4.7e-30 137.5 210 42.4
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 1.0e-29 136.3 689 28.2
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 5.2e-29 134.0 726 28.7
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 8.8e-29 133.3 236 41.5
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 3.3e-28 131.3 346 35.3
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 4.4e-28 131.0 192 51.0
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 1.3e-27 129.4 609 31.9
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 4.8e-27 127.5 925 26.8
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 4.8e-27 127.5 430 33.3
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 6.3e-27 127.1 239 43.1
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 1.4e-26 125.9 437 35.7
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 3.1e-26 124.8 726 29.9
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 5.3e-26 124.0 587 28.6
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 9.1e-26 123.2 205 43.4
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 1.6e-25 122.5 666 28.7
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 3.5e-25 121.3 406 33.0
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 5.9e-25 120.6 210 40.0
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 3.8e-24 117.9 450 33.8
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 3.8e-24 117.9 688 28.5
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 5.0e-24 117.5 150 54.7
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 5.0e-24 117.5 150 54.7
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 8.5e-24 116.7 458 31.0
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 1.1e-23 116.3 950 25.7
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 1.1e-23 116.3 918 24.3
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 3.2e-23 114.8 660 28.6
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 4.2e-23 114.4 219 46.6
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 5.5e-23 114.0 681 29.4
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 5.5e-23 114.0 423 28.4
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 7.2e-23 113.6 713 28.6
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 9.4e-23 113.2 450 31.3
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 9.4e-23 113.2 450 31.3
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 9.4e-23 113.2 450 31.3
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 9.4e-23 113.2 223 43.0
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 1.2e-22 112.8 512 31.4
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.6e-22 112.5 685 29.6
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.7e-22 111.7 676 29.1
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 3.6e-22 111.3 220 42.3
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 4.7e-22 110.9 617 29.2
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 4.7e-22 110.9 681 29.2
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 8.0e-22 110.2 443 35.9
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 1.4e-21 109.4 209 36.4
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 1.4e-21 109.4 343 34.4
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 3.0e-21 108.2 226 42.9
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 4.0e-21 107.8 457 32.4
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 5.2e-21 107.5 216 46.3
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 6.8e-21 107.1 219 44.7
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 2.6e-20 105.1 232 42.2
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 5.7e-20 104.0 114 70.2
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 2.2e-19 102.1 444 34.5
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 2.8e-19 101.7 296 35.1
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 2.4e-18 98.6 133 58.6
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 4.1e-18 97.8 687 28.5
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 4.1e-18 97.8 436 34.6
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 4.1e-18 97.8 438 31.5
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 5.4e-18 97.4 635 28.2
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 9.1e-18 96.7 265 35.8
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 2.0e-17 95.5 133 45.9
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 2.7e-17 95.1 225 40.0
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.5e-17 94.7 881 24.6
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 3.5e-17 94.7 699 26.5
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 1.3e-16 92.8 212 30.2
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.3e-16 92.8 699 30.6
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.7e-16 92.4 253 33.6
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 1.7e-16 92.4 390 33.1
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 5.0e-16 90.9 234 40.6
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 5.0e-16 90.9 435 31.5
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 8.6e-16 90.1 598 30.4
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 8.6e-16 90.1 168 44.0
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 1.9e-15 89.0 114 52.6
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 3.3e-15 88.2 119 57.1
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 4.2e-15 87.8 208 39.9
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 5.5e-15 87.4 394 29.2
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 2.1e-14 85.5 441 28.3
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 2.8e-14 85.1 72 51.4
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 3.6e-14 84.7 134 47.0
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.4e-13 82.8 382 25.7
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 3.0e-13 81.6 824 26.0
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 4.0e-13 81.3 211 43.6
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 1.2e-12 79.7 207 40.6
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 4.4e-12 77.8 409 25.7
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.7e-11 75.9 62 61.3
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 1.6e-09 69.3 139 37.4
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 7.8e-09 67.0 130 45.4
AL52U10020 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 7.8e-09 67.0 64 64.1
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 2.9e-08 65.1 650 25.4
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 2.9e-08 65.1 119 51.3
CSS0039023 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 1.1e-07 63.2 442 24.0
CSS0014816 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 2.5e-07 62.0 445 23.8
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 4.3e-07 61.2 111 37.8
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 1.6e-06 59.3 48 60.4
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 1.6e-06 59.3 48 60.4
Hma1.2p1_1540F.1_g289660 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 2.1e-06 58.9 159 33.3
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 3.6e-06 58.2 357 27.2


User provided reference genes

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